Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 0.0e+00 1232.2 659 100.0
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 3.1e-162 576.2 704 54.8
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 9.0e-53 212.6 703 33.0
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 1.2e-49 202.2 777 32.0
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 1.4e-48 198.7 725 32.0
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 4.3e-47 193.7 723 31.4
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 5.7e-47 193.4 754 30.6
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 2.2e-46 191.4 721 32.2
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 2.8e-46 191.0 275 45.8
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 4.8e-46 190.3 684 33.5
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 6.3e-46 189.9 711 32.5
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.8e-45 188.3 725 32.0
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 1.0e-43 182.6 691 32.4
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 1.9e-42 178.3 749 31.5
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.0e-40 172.6 772 30.8
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 1.1e-39 169.1 743 31.4
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 7.4e-39 166.4 719 29.3
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 7.0e-37 159.8 709 29.2
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 9.1e-37 159.5 773 30.3
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 1.6e-36 158.7 717 29.4
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 8.5e-35 152.9 727 30.1
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 1.1e-34 152.5 709 31.0
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 9.4e-34 149.4 732 30.3
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 2.3e-32 144.8 878 28.2
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 3.0e-32 144.4 743 30.4
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 1.1e-31 142.5 756 28.7
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 1.5e-31 142.1 850 29.1
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.6e-31 141.4 725 28.1
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.4e-29 134.8 731 27.8
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 4.1e-29 134.0 803 28.4
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 4.1e-29 134.0 714 29.3
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 4.5e-28 130.6 776 27.4
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 7.7e-28 129.8 742 26.8
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 8.5e-27 126.3 804 26.6
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 1.2e-25 122.5 680 29.9
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 1.4e-24 119.0 885 26.4
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 1.5e-23 115.5 790 25.4
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 3.4e-23 114.4 690 26.5
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.2e-22 111.7 734 25.6
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 8.3e-22 109.8 762 26.4
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 4.1e-21 107.5 725 26.9
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 2.0e-20 105.1 750 25.7
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 1.7e-19 102.1 359 32.6
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 3.2e-18 97.8 668 26.2
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 7.2e-18 96.7 181 41.4
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 9.4e-18 96.3 360 33.1
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 9.4e-18 96.3 867 25.0
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 8.0e-17 93.2 748 23.5
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 1.4e-16 92.4 750 26.3
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 1.2e-15 89.4 795 25.0
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.0e-15 88.6 759 25.2
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 4.9e-14 84.0 306 29.4
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 1.8e-13 82.0 441 31.7
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 4.1e-13 80.9 881 23.2
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 1.2e-12 79.3 249 38.2
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 2.7e-12 78.2 391 30.4
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 3.5e-12 77.8 706 25.4
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 5.9e-12 77.0 787 25.3
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 7.7e-12 76.6 692 24.7
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 7.7e-12 76.6 313 30.0
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 1.0e-11 76.3 636 27.5
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 6.6e-11 73.6 426 27.5
RcHm_v2.0_Chr2g0140811 Rosa chinensis HOM05D008208 ORTHO05D010143 2.5e-10 71.6 279 31.9
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 6.1e-09 67.0 228 33.3
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 6.1e-09 67.0 228 33.3
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 8.0e-09 66.6 678 21.8
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 1.8e-08 65.5 261 29.1
ATR0705G064 Amborella trichopoda HOM05D008208 ORTHO05D010143 8.9e-08 63.2 750 24.5
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 5.7e-07 60.5 684 24.7
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 2.2e-06 58.5 200 33.0
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 2.9e-06 58.2 201 33.8
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 3.7e-06 57.8 219 33.3
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 3.7e-06 57.8 244 30.3
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 3.7e-06 57.8 206 31.1
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 4.9e-06 57.4 202 33.2
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 8.3e-06 56.6 673 23.3
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 8.3e-06 56.6 198 33.3


User provided reference genes

Program Settings