Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 2.8e-81 305.4 182 100.0
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.5e-77 293.1 182 95.6
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.5e-29 133.7 176 52.3
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 4.7e-28 128.6 175 49.7
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 7.6e-26 121.3 182 47.8
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 9.9e-26 120.9 136 54.4
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.8e-25 119.0 124 54.8
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 9.3e-24 114.4 179 43.0
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 9.3e-24 114.4 146 54.1
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 4.6e-23 112.1 185 43.8
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 6.0e-23 111.7 182 46.7
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 7.8e-23 111.3 185 48.1
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 7.8e-23 111.3 177 46.9
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 7.8e-23 111.3 177 46.9
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 7.8e-23 111.3 177 46.9
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.0e-22 110.9 178 47.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 1.3e-22 110.5 134 56.0
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 1.3e-22 110.5 208 42.8
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.7e-22 110.2 113 58.4
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.3e-22 109.8 182 45.1
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.9e-22 109.0 182 45.1
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 5.1e-22 108.6 113 56.6
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 5.1e-22 108.6 142 51.4
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 5.1e-22 108.6 99 62.6
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 6.6e-22 108.2 179 45.3
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.9e-21 106.7 181 48.6
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 7.3e-21 104.8 179 43.0
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 2.1e-20 103.2 179 46.4
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.6e-20 102.4 122 53.3
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 8.1e-20 101.3 183 42.1
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 8.1e-20 101.3 180 46.7
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 8.1e-20 101.3 178 41.6
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 8.1e-20 101.3 111 55.9
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.1e-19 100.9 179 43.6
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 1.1e-19 100.9 171 42.7
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.8e-19 100.1 141 50.4
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 2.4e-19 99.8 157 46.5
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.4e-19 99.8 107 57.9
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 3.1e-19 99.4 179 39.7
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.1e-19 99.4 179 39.7
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.1e-19 99.4 171 41.5
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 6.9e-19 98.2 131 50.4
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.5e-18 97.1 139 46.0
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 2.0e-18 96.7 94 68.1
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 3.4e-18 95.9 176 41.5
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 3.4e-18 95.9 91 63.7
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 4.5e-18 95.5 178 42.7
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 7.6e-18 94.7 172 41.9
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 9.9e-18 94.4 88 63.6
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 9.9e-18 94.4 184 40.8
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.3e-17 94.0 98 57.1
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.7e-17 93.6 94 67.0
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 2.2e-17 93.2 142 49.3
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.2e-17 93.2 183 38.8
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 2.9e-17 92.8 192 41.7
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 6.4e-17 91.7 181 45.3
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 8.4e-17 91.3 137 53.3
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.4e-16 90.5 184 40.2
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 2.4e-16 89.7 183 44.8
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 2.4e-16 89.7 117 61.5
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 5.4e-16 88.6 85 56.5
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 1.6e-15 87.0 199 36.7
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 2.1e-15 86.7 168 45.8
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 2.1e-15 86.7 169 37.9
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.5e-15 85.9 115 46.1
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.5e-15 85.9 115 46.1
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 3.5e-15 85.9 110 51.8
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 7.9e-15 84.7 120 50.0
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.0e-14 84.3 81 55.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.0e-14 84.3 81 55.6
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.3e-14 84.0 178 36.0
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.8e-14 83.6 114 43.9
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.8e-14 83.6 114 43.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.8e-14 83.6 114 43.9
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 3.9e-14 82.4 175 38.3
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 5.1e-14 82.0 176 40.3
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 5.1e-14 82.0 102 49.0
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 8.7e-14 81.3 110 47.3
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.5e-13 80.5 179 36.9
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.5e-13 80.5 144 40.3
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 5.6e-13 78.6 107 46.7
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 9.6e-13 77.8 179 35.8
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.3e-12 77.4 146 38.4
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 2.1e-12 76.6 116 48.3
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 2.8e-12 76.3 176 36.4
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 4.8e-12 75.5 179 36.9
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 6.2e-12 75.1 95 48.4
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 1.1e-11 74.3 119 42.0
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 1.1e-11 74.3 173 41.0
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.4e-11 73.9 79 55.7
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.4e-11 73.9 100 51.0
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.5e-10 70.5 180 41.7
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 1.5e-10 70.5 74 58.1
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 7.6e-10 68.2 115 38.3
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 9.9e-10 67.8 108 41.7
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 6.4e-09 65.1 175 35.4
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 1.1e-08 64.3 74 51.4
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 5.5e-08 62.0 85 40.0
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 7.1e-08 61.6 112 42.9


User provided reference genes

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