Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 4.5e-269 930.6 458 100.0
Oeu017397.1 Olea europaea HOM05D005444 ORTHO05D006773 3.0e-111 406.4 451 53.2
Nitab4.5_0001326g0170 Nicotiana tabacum HOM05D005444 ORTHO05D006773 1.1e-84 318.2 451 44.6
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 1.7e-82 310.8 453 43.7
Actinidia34411 Actinidia chinensis HOM05D005444 ORTHO05D006773 5.5e-81 305.8 458 43.0
Nitab4.5_0000463g0210 Nicotiana tabacum HOM05D005444 ORTHO05D006773 2.1e-80 303.9 451 42.8
SalBow3G1488 Salvia bowleyana HOM05D005444 ORTHO05D006773 5.1e-79 299.3 458 42.4
Sc21g0005860 Simmondsia chinensis HOM05D005444 ORTHO05D006773 3.3e-78 296.6 457 42.7
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 9.6e-78 295.0 457 42.0
Peaxi162Scf00774g00121 Petunia axillaris HOM05D005444 ORTHO05D006773 1.6e-77 294.3 451 41.9
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 6.2e-77 292.4 457 42.2
GSVIVG01024939001 Vitis vinifera HOM05D005444 ORTHO05D006773 1.1e-76 291.6 451 41.5
CAN.G394.63 Capsicum annuum HOM05D005444 ORTHO05D006773 1.8e-76 290.8 456 40.1
Lj1A150T42 Lonicera japonica HOM05D005444 ORTHO05D006773 1.2e-75 288.1 445 42.0
Sopen06g032680 Solanum pennellii HOM05D005444 ORTHO05D006773 2.0e-75 287.3 451 40.8
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 2.6e-75 287.0 452 42.0
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 3.4e-75 286.6 450 40.7
Ciclev10028946m.g Citrus clementina HOM05D005444 ORTHO05D006773 5.8e-75 285.8 459 40.5
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 5.8e-75 285.8 449 40.3
Solyc06g076250.4 Solanum lycopersicum HOM05D005444 ORTHO05D006773 1.0e-74 285.0 451 40.6
PGSC0003DMG401030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 4.9e-74 282.7 451 40.6
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 6.5e-74 282.3 458 39.7
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 4.2e-73 279.6 461 42.1
vmacro14541 Vaccinium macrocarpon HOM05D005444 ORTHO05D006773 4.2e-73 279.6 445 41.1
Migut.D02083 Erythranthe guttata HOM05D005444 ORTHO05D006773 9.3e-73 278.5 440 42.5
Rhsim01G0229400 Rhododendron simsii HOM05D005444 ORTHO05D006773 9.3e-73 278.5 449 41.2
Cc01_g13010 Coffea canephora HOM05D005444 ORTHO05D006773 7.9e-72 275.4 453 41.1
Actinidia23933 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.0e-71 275.0 456 41.2
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 2.3e-71 273.9 453 40.8
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 5.7e-70 269.2 460 38.3
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 5.7e-70 269.2 460 39.3
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 9.7e-70 268.5 464 39.0
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 1.3e-69 268.1 455 38.7
Sabra16G0145900 Salix brachista HOM05D005444 ORTHO05D006773 6.3e-69 265.8 398 41.7
TAR633G2200 Trochodendron aralioides HOM05D005444 ORTHO05D006773 8.2e-69 265.4 461 38.6
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 1.4e-68 264.6 453 38.9
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 1.4e-68 264.6 403 41.2
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 1.8e-68 264.2 453 38.9
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 5.3e-68 262.7 462 39.6
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 9.0e-68 261.9 451 38.6
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 3.4e-67 260.0 453 38.9
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 5.9e-67 259.2 464 38.8
EL10Ac7g16033 Beta vulgaris HOM05D005444 ORTHO05D006773 1.3e-66 258.1 409 40.1
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 1.3e-66 258.1 453 39.7
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 5.0e-66 256.1 457 37.0
PSO063G3487 Papaver somniferum HOM05D005444 ORTHO05D006773 6.1e-64 249.2 431 37.8
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 7.9e-64 248.8 458 36.9
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 1.4e-63 248.1 441 36.7
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 1.8e-63 247.7 453 38.0
FAN25G3546 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.8e-63 247.7 440 38.9
PSO339G5422 Papaver somniferum HOM05D005444 ORTHO05D006773 2.3e-63 247.3 426 37.6
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 2.3e-63 247.3 452 37.6
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 3.9e-63 246.5 453 37.7
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 6.7e-63 245.7 461 36.7
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 6.7e-63 245.7 458 36.7
Lj3g0017515 Lotus japonicus HOM05D005444 ORTHO05D006773 8.8e-63 245.4 451 36.8
Potri.009G032300 Populus trichocarpa HOM05D005444 ORTHO05D006773 1.5e-62 244.6 461 37.5
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 1.9e-62 244.2 445 37.3
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 1.9e-62 244.2 458 37.1
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 2.5e-62 243.8 452 37.4
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 3.3e-62 243.4 461 36.4
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 3.3e-62 243.4 447 37.8
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 4.3e-62 243.0 441 37.2
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 5.7e-62 242.7 459 36.8
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 7.4e-62 242.3 451 35.9
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 9.7e-62 241.9 454 37.0
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 1.7e-61 241.1 433 38.6
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 1.7e-61 241.1 452 37.6
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 2.8e-61 240.4 449 36.7
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 8.2e-61 238.8 452 37.4
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 1.1e-60 238.4 452 37.4
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 1.1e-60 238.4 452 37.4
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 1.1e-60 238.4 452 37.4
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 2.4e-60 237.3 452 37.2
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 4.1e-60 236.5 451 36.6
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 1.2e-59 235.0 451 36.6
CiPaw.13G092700 Carya illinoinensis HOM05D005444 ORTHO05D006773 1.5e-59 234.6 414 39.9
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 1.5e-59 234.6 403 36.7
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 5.9e-59 232.6 438 35.8
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea HOM05D005444 ORTHO05D006773 1.3e-58 231.5 437 36.2
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 1.3e-58 231.5 440 35.9
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea HOM05D005444 ORTHO05D006773 1.7e-58 231.1 421 37.1
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 1.7e-58 231.1 397 37.5
Dinv17019 Davidia involucrata HOM05D005444 ORTHO05D006773 2.2e-58 230.7 456 37.7
Dinv42967 Davidia involucrata HOM05D005444 ORTHO05D006773 2.2e-58 230.7 456 37.7
Dinv43132 Davidia involucrata HOM05D005444 ORTHO05D006773 2.2e-58 230.7 456 37.7
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 3.8e-58 229.9 400 37.0
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 6.5e-58 229.2 404 36.1
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 8.5e-58 228.8 420 35.7
ATR0559G091 Amborella trichopoda HOM05D005444 ORTHO05D006773 2.5e-57 227.3 397 38.0
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 2.5e-57 227.3 508 33.1
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 2.1e-56 224.2 454 35.9
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 2.0e-54 217.6 458 35.8
Thecc.09G320000 Theobroma cacao HOM05D005444 ORTHO05D006773 3.3e-54 216.9 418 37.6
Prupe.6G074400 Prunus persica HOM05D005444 ORTHO05D006773 1.7e-53 214.5 420 38.1
SGA_v2.0_scaffold203G41537 Striga asiatica HOM05D005444 ORTHO05D006773 1.7e-53 214.5 150 71.3
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 3.7e-53 213.4 405 35.1
Duzib168G1171 Durio zibethinus HOM05D005444 ORTHO05D006773 1.4e-52 211.5 420 37.1
CDE09G1090 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 1.8e-52 211.1 443 33.9
CDE04G2637 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 3.4e-51 206.8 401 34.2
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 7.7e-51 205.7 469 34.3
Hund18899 Selenicereus undatus HOM05D005444 ORTHO05D006773 1.2e-48 198.4 412 35.7
Ca_19148_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 1.0e-47 195.3 411 33.8
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 1.0e-47 195.3 459 33.8
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 1.1e-46 191.8 427 33.7
PGSC0003DMG402030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 4.8e-45 186.4 138 66.7
SEGI_38540 Sequoiadendron giganteum HOM05D005444 ORTHO05D006773 1.4e-44 184.9 396 33.1
SGA_v2.0_scaffold203G41535 Striga asiatica HOM05D005444 ORTHO05D006773 3.5e-43 180.3 130 72.3
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 3.0e-39 167.2 445 29.7
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 1.8e-36 157.9 144 57.6
Mapoly0050s0097 Marchantia polymorpha HOM05D005444 ORTHO05D006773 4.1e-36 156.8 397 29.2
CARHR285770 Cardamine hirsuta HOM05D005444 ORTHO05D006773 7.0e-36 156.0 141 56.0
Aqoxy1G00927 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 7.7e-35 152.5 112 67.0
TPR.G3768 Trifolium pratense HOM05D005444 ORTHO05D006773 3.2e-33 147.1 122 62.3
Zm00001eb355820 Zea mays HOM05D005444 ORTHO05D006773 4.2e-33 146.7 131 56.5
HPP92_009462 Vanilla planifolia HOM05D005444 ORTHO05D006773 7.2e-33 146.0 378 29.4
Ah.15g097630 Amaranthus hybridus HOM05D005444 ORTHO05D006773 1.6e-32 144.8 130 58.5
unitig_747.g22036 Utricularia gibba HOM05D005444 ORTHO05D006773 1.6e-32 144.8 99 71.7
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis HOM05D005444 ORTHO05D006773 1.0e-31 142.1 400 27.0
Pp3c1_24530 Physcomitrium patens HOM05D005444 ORTHO05D006773 2.3e-31 141.0 394 28.4
Aqoxy1G00926 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 4.0e-31 140.2 123 56.9
DCAR_005353 Daucus carota HOM05D005444 ORTHO05D006773 1.3e-29 135.2 93 65.6
HanXRQChr06g0167871 Helianthus annuus HOM05D000219 ORTHO05D006773 7.7e-27 125.9 76 80.3
HanXRQChr10g0291051 Helianthus annuus HOM05D005444 ORTHO05D006773 7.7e-27 125.9 116 59.5
HanXRQChr10g0291061 Helianthus annuus HOM05D005444 ORTHO05D006773 7.7e-27 125.9 116 59.5
Pp3c14_5400 Physcomitrium patens HOM05D005444 ORTHO05D006773 3.8e-26 123.6 412 26.2
Os05g0110800 Oryza sativa ssp. japonica HOM05D005444 ORTHO05D006773 2.5e-25 120.9 74 81.1
unitig_747.g22037 Utricularia gibba HOM05D005444 ORTHO05D006773 4.7e-24 116.7 115 53.9
Duzib170G0057 Durio zibethinus HOM05D005444 ORTHO05D006773 1.3e-21 108.6 397 28.2
Nn2g13370 Nelumbo nucifera HOM05D005444 ORTHO05D006773 6.3e-21 106.3 60 78.3
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 6.3e-21 106.3 107 58.9
TAR636G2897 Trochodendron aralioides HOM05D005444 ORTHO05D006773 7.8e-19 99.4 95 55.8
TPR.G27554 Trifolium pratense HOM05D005444 ORTHO05D006773 2.9e-18 97.4 71 64.8
Medtr4g064030 Medicago truncatula HOM05D005444 ORTHO05D006773 1.5e-17 95.1 135 41.5
MCO07G449 Micromonas commoda HOM05D005444 ORTHO05D006773 7.3e-17 92.8 101 47.5
AUR62031662 Chenopodium quinoa HOM05D001050 ORTHO05D001270 8.9e-15 85.9 58 72.4
Psat5g007960 Pisum sativum HOM05D005444 ORTHO05D006773 1.5e-14 85.1 73 60.3
Ah.15g097620 Amaranthus hybridus HOM05D005444 ORTHO05D006773 2.6e-14 84.3 44 84.1
COL.COLO4_35627 Corchorus olitorius HOM05D005444 ORTHO05D001950 1.7e-13 81.6 84 54.8
TPR.G376 Trifolium pratense HOM05D025391 ORTHO05D030167 1.7e-13 81.6 41 85.4
Psat4g229040 Pisum sativum HOM05D005444 ORTHO05D006773 7.0e-12 76.3 42 81.0
Glyma.11G138967 Glycine max HOM05D005444 ORTHO05D006773 5.0e-10 70.1 73 52.1
BcaB01g04587 Brassica carinata HOM05D000021 ORTHO05D000010 3.3e-09 67.4 86 45.3


User provided reference genes

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