Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 0.0e+00 1416.0 725 100.0
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 4.4e-258 894.8 678 72.0
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 6.0e-183 645.2 709 53.2
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 1.1e-147 528.1 697 47.1
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 8.5e-145 518.5 685 46.9
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.1e-144 518.1 722 46.5
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 1.7e-132 477.6 715 41.0
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.1e-131 474.9 732 42.3
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 1.6e-130 471.1 715 40.7
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 6.7e-126 455.7 652 44.6
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 1.8e-123 447.6 722 41.8
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.2e-122 444.9 655 41.7
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.9e-120 437.6 723 41.2
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 6.1e-119 432.6 725 40.0
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.3e-118 430.6 747 38.2
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 3.0e-118 430.3 720 39.0
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 2.6e-117 427.2 722 39.5
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 3.7e-116 423.3 742 38.4
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 4.1e-115 419.9 736 39.4
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 7.0e-115 419.1 721 40.2
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 2.1e-111 407.5 723 38.2
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 3.6e-111 406.8 664 39.2
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 6.8e-110 402.5 655 39.1
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 1.4e-107 394.8 646 41.3
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 1.8e-107 394.4 719 39.1
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 2.7e-106 390.6 729 36.2
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 1.2e-103 381.7 717 37.5
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 2.8e-103 380.6 720 37.9
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 8.0e-103 379.0 712 36.9
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.5e-101 374.8 689 38.6
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 1.5e-101 374.8 711 37.8
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 4.9e-100 369.8 686 38.9
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 6.4e-100 369.4 629 39.6
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 1.2e-98 365.2 711 37.4
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 2.0e-98 364.4 723 37.8
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 2.0e-98 364.4 703 37.0
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.5e-98 363.6 720 35.1
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 6.0e-98 362.8 641 40.4
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 1.7e-97 361.3 721 35.2
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 3.0e-97 360.5 716 37.0
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 1.9e-96 357.8 705 38.0
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 1.9e-96 357.8 722 35.6
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 4.3e-96 356.7 734 36.6
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 5.6e-96 356.3 717 37.0
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 6.2e-95 352.8 667 38.4
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 3.1e-94 350.5 681 36.7
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.2e-93 348.6 719 34.6
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 2.6e-93 347.4 711 34.9
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 9.8e-93 345.5 591 42.3
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 9.8e-93 345.5 718 35.4
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 2.2e-92 344.4 593 42.5
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 6.4e-92 342.8 736 34.9
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 6.4e-92 342.8 736 35.3
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.4e-91 341.7 717 35.4
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.9e-91 341.3 729 34.8
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 2.4e-91 340.9 720 33.5
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 7.0e-91 339.3 708 35.9
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 1.2e-90 338.6 638 36.4
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 2.1e-90 337.8 730 35.1
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 1.3e-89 335.1 708 35.6
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 3.9e-89 333.6 723 35.5
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 3.9e-89 333.6 722 35.5
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 3.9e-89 333.6 722 35.5
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 5.6e-88 329.7 714 34.5
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 2.1e-87 327.8 736 34.2
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 3.6e-87 327.0 708 36.2
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 4.7e-87 326.6 686 35.7
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 3.4e-85 320.5 679 35.3
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 2.2e-84 317.8 720 33.3
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 2.9e-84 317.4 661 35.4
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 4.9e-84 316.6 727 34.0
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 4.1e-83 313.5 735 35.1
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 7.1e-83 312.8 715 32.0
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 3.9e-81 307.0 713 34.1
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 4.3e-80 303.5 732 33.2
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 4.3e-80 303.5 725 34.6
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 2.8e-79 300.8 442 44.8
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 5.2e-78 296.6 747 33.5
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 8.9e-78 295.8 278 58.6
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 8.9e-78 295.8 704 34.1
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 5.8e-77 293.1 720 32.4
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 9.9e-77 292.4 720 32.1
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 1.7e-76 291.6 622 36.5
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 2.2e-76 291.2 666 35.4
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 2.4e-75 287.7 729 32.2
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 5.4e-75 286.6 415 44.3
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 2.7e-74 284.3 709 31.7
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 1.3e-73 282.0 715 31.5
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 3.0e-73 280.8 614 35.2
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 1.3e-71 275.4 745 31.5
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 2.1e-71 274.6 711 31.6
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 6.2e-71 273.1 749 30.8
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 1.8e-70 271.6 338 48.8
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 9.0e-70 269.2 434 41.0
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 3.4e-69 267.3 726 31.4
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 6.6e-65 253.1 445 38.7
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 5.3e-62 243.4 278 52.5
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 1.5e-56 225.3 485 32.4
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 1.0e-52 212.6 736 28.7
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.2e-50 205.7 342 39.5
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 2.1e-50 204.9 727 26.1
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 7.1e-43 179.9 492 31.5
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 1.4e-38 165.6 456 30.7
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.9e-36 157.9 575 27.5
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 6.9e-30 136.7 402 31.6
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 2.2e-28 131.7 733 24.3
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 2.9e-28 131.3 495 27.9
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 3.7e-23 114.4 392 31.1
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 8.2e-23 113.2 327 29.7
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.5e-21 109.0 372 27.4
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 1.4e-14 85.9 330 26.7
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 4.1e-14 84.3 137 40.9
SEGI_29361 Sequoiadendron giganteum HOM05D006730 ORTHO05D008189 5.0e-12 77.4 336 25.6
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 2.6e-08 65.1 115 40.0
Gohir.A02G010550 Gossypium hirsutum HOM05D006730 ORTHO05D008189 7.5e-08 63.5 94 36.2
SGA_v2.0_scaffold45G17088 Striga asiatica HOM05D001172 ORTHO05D001128 8.3e-07 60.1 148 34.5
Dinv05092 Davidia involucrata HOM05D006730 ORTHO05D008189 1.1e-06 59.7 57 52.6


User provided reference genes

Program Settings