Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 1.6e-269 932.2 475 100.0
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 7.4e-198 694.1 459 80.8
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 4.4e-182 641.7 456 75.4
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.7e-170 603.2 470 70.0
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 1.4e-167 593.6 435 73.6
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 3.1e-164 582.4 435 72.9
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 1.2e-163 580.5 445 70.8
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 2.0e-163 579.7 436 72.9
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 1.3e-162 577.0 442 69.2
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 1.7e-162 576.6 442 68.8
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 6.5e-162 574.7 435 70.3
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 4.2e-161 572.0 441 70.7
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 4.2e-161 572.0 466 65.9
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 7.2e-161 571.2 434 72.6
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 9.4e-161 570.9 441 68.9
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 3.6e-160 568.9 442 68.3
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 4.7e-160 568.5 441 69.4
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 1.0e-159 567.4 442 69.0
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 4.4e-158 562.0 467 66.6
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 7.5e-158 561.2 441 68.3
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.3e-157 560.5 436 71.1
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.3e-157 560.5 487 63.0
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 1.3e-157 560.5 435 69.2
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.4e-156 557.0 435 70.3
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 7.0e-156 554.7 435 70.3
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 3.5e-155 552.4 448 67.2
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 4.5e-155 552.0 456 67.1
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 1.1e-153 547.4 442 68.3
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.8e-152 542.7 435 67.4
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 3.6e-152 542.3 435 67.4
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 6.1e-152 541.6 435 67.1
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 8.0e-152 541.2 435 67.1
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 1.0e-151 540.8 441 66.4
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 1.0e-151 540.8 461 65.7
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 1.8e-151 540.0 443 65.9
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 1.8e-151 540.0 441 65.1
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.3e-151 539.7 435 66.7
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 4.0e-151 538.9 484 62.0
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 6.8e-151 538.1 452 67.0
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 1.2e-150 537.3 441 65.1
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 1.2e-150 537.3 435 67.4
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.5e-150 537.0 442 65.6
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 5.7e-150 535.0 435 66.9
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 9.8e-150 534.3 435 69.2
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 1.7e-149 533.5 443 66.1
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 2.4e-148 529.6 441 64.6
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 4.1e-148 528.9 458 63.3
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 5.4e-148 528.5 435 65.7
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 1.6e-147 526.9 441 64.2
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 7.8e-147 524.6 464 62.9
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 1.7e-146 523.5 472 61.7
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 2.9e-146 522.7 445 66.3
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 5.0e-146 521.9 442 67.0
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 2.5e-145 519.6 392 71.4
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 4.3e-145 518.8 493 62.1
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 8.0e-144 514.6 438 66.2
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 1.8e-143 513.5 427 65.8
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.8e-143 513.5 436 64.2
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 2.3e-143 513.1 440 65.2
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 8.9e-143 511.1 459 63.4
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 2.0e-142 510.0 435 65.3
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 4.1e-140 502.3 438 65.8
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 5.4e-140 501.9 516 59.1
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 3.5e-139 499.2 464 61.4
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 2.3e-135 486.5 475 57.5
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 2.3e-135 486.5 472 56.6
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 1.5e-134 483.8 441 63.0
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.9e-133 479.6 435 62.3
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 1.3e-130 470.7 464 59.1
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.4e-127 460.7 473 57.7
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 1.4e-127 460.7 479 57.2
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 3.1e-127 459.5 484 57.2
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 6.8e-127 458.4 436 59.4
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.2e-126 457.6 371 69.3
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.2e-126 457.6 479 53.7
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 7.5e-126 454.9 415 61.2
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 9.9e-126 454.5 454 60.4
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 4.9e-125 452.2 468 56.8
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 6.4e-125 451.8 461 56.0
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 7.1e-124 448.4 489 55.8
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 2.1e-123 446.8 439 61.0
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 1.7e-122 443.7 489 55.4
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 3.0e-122 443.0 445 58.7
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.1e-121 441.0 444 58.6
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 5.6e-121 438.7 447 59.3
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 7.3e-121 438.3 358 67.9
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 7.3e-121 438.3 434 59.4
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 2.4e-119 433.3 446 59.2
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 4.0e-119 432.6 355 66.8
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 6.8e-119 431.8 442 57.5
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 3.4e-118 429.5 446 58.7
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 5.8e-118 428.7 449 55.7
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 3.2e-116 422.9 441 56.9
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 3.5e-115 419.5 455 56.7
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 1.7e-114 417.2 508 50.8
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 6.6e-114 415.2 448 55.8
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 1.2e-112 411.0 456 56.1
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 4.0e-111 406.0 448 54.9
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 5.2e-111 405.6 315 70.5
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 2.6e-110 403.3 502 50.8
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 5.8e-110 402.1 475 53.5
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 2.2e-109 400.2 445 56.6
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 7.3e-105 385.2 518 47.5
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.6e-99 367.5 486 48.8
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.5e-97 360.9 482 48.3
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 3.9e-90 336.3 257 73.5
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 2.0e-86 323.9 291 61.9
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 2.9e-69 266.9 335 48.1
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 1.6e-67 261.2 223 65.5
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 2.3e-66 257.3 223 64.6
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 2.6e-65 253.8 253 58.1
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 3.3e-65 253.4 176 72.7
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 2.8e-64 250.4 258 55.0
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 1.8e-63 247.7 220 64.1
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 1.6e-59 234.6 455 37.6
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 6.5e-53 212.6 181 64.6
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 3.7e-48 196.8 441 34.7
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 3.2e-44 183.7 447 34.7
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 8.8e-42 175.6 434 34.3
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.9e-36 157.9 332 37.0
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 2.5e-36 157.5 444 35.1
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 4.2e-36 156.8 180 50.0
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 5.5e-36 156.4 420 32.1
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 3.6e-35 153.7 130 66.2
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.0e-34 152.1 96 81.2
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 6.3e-32 142.9 426 31.9
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 4.7e-27 126.7 158 48.1
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 2.3e-26 124.4 475 29.3
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.0e-21 109.0 115 55.7
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 6.4e-16 89.7 82 62.2
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.4e-15 87.8 80 56.2
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 1.4e-10 72.0 41 78.0
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 4.1e-07 60.5 91 44.0


User provided reference genes

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