Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 5.2e-105 384.4 196 100.0
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.8e-57 226.5 131 89.3
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 9.3e-38 161.0 133 68.4
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.5e-35 153.7 136 66.2
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.5e-35 153.7 136 66.2
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 3.3e-35 152.5 130 68.5
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 9.6e-35 151.0 133 66.9
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 4.8e-34 148.7 132 66.7
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 4.8e-34 148.7 143 62.9
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 6.9e-33 144.8 132 67.4
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 7.6e-32 141.4 132 60.6
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.3e-31 140.6 158 60.8
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.7e-31 140.2 137 63.5
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 2.2e-31 139.8 132 62.9
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 8.4e-31 137.9 130 64.6
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.9e-30 136.7 133 64.7
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.9e-30 136.7 147 59.2
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 4.2e-30 135.6 174 48.3
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 4.2e-30 135.6 143 62.2
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 9.3e-30 134.4 137 62.0
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 9.3e-30 134.4 138 60.9
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 9.3e-30 134.4 132 68.2
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 9.3e-30 134.4 132 68.2
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 2.7e-29 132.9 176 51.1
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.9e-29 131.3 132 66.7
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.0e-28 131.0 132 59.8
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 1.8e-28 130.2 149 57.7
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 1.8e-28 130.2 146 57.5
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.3e-28 129.8 131 63.4
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 3.9e-28 129.0 135 62.2
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 6.7e-28 128.3 139 60.4
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 6.7e-28 128.3 134 60.4
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 6.7e-28 128.3 134 59.7
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 8.7e-28 127.9 137 55.5
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.5e-27 127.1 172 51.2
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 3.3e-27 125.9 135 56.3
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 4.3e-27 125.6 155 52.9
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 6.2e-26 121.7 143 57.3
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.4e-25 120.6 133 60.2
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 1.8e-25 120.2 147 57.1
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 2.4e-25 119.8 141 56.7
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.3e-25 118.6 137 59.9
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.3e-25 118.6 137 59.9
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 6.9e-25 118.2 141 58.2
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 9.0e-25 117.9 137 56.9
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 9.0e-25 117.9 138 54.3
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 1.2e-24 117.5 133 59.4
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.5e-24 117.1 135 54.1
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 3.4e-24 115.9 159 48.4
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 3.4e-24 115.9 130 58.5
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 5.8e-24 115.2 142 53.5
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 5.8e-24 115.2 159 48.4
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 5.8e-24 115.2 144 52.8
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 5.8e-24 115.2 139 53.2
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.3e-23 114.0 156 54.5
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 2.2e-23 113.2 144 53.5
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.9e-23 112.8 139 56.1
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 4.9e-23 112.1 107 63.6
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.5e-22 109.8 134 55.2
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 7.1e-22 108.2 147 52.4
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 7.1e-22 108.2 139 49.6
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 7.1e-22 108.2 146 52.7
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 9.3e-22 107.8 124 58.9
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 9.3e-22 107.8 163 49.7
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 9.3e-22 107.8 130 56.9
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.2e-21 107.5 136 54.4
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.2e-21 107.5 136 54.4
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.0e-20 104.4 133 55.6
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.0e-20 102.8 154 49.4
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 6.7e-20 101.7 129 55.8
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.5e-19 100.5 127 57.5
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 1.9e-19 100.1 150 47.3
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.5e-19 99.8 133 53.4
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 9.7e-19 97.8 132 51.5
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 1.3e-18 97.4 149 46.3
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 1.6e-18 97.1 131 47.3
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 2.2e-18 96.7 159 48.4
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 4.8e-18 95.5 164 50.6
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 8.2e-18 94.7 138 48.6
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.1e-17 92.4 133 51.9
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 4.1e-17 92.4 186 43.0
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.0e-16 90.1 144 50.0
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 2.6e-16 89.7 143 44.8
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 2.6e-16 89.7 141 48.9
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 3.4e-16 89.4 130 46.2
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 4.5e-16 89.0 161 44.7
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.7e-16 88.2 143 46.2
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 7.7e-16 88.2 138 49.3
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.3e-15 87.4 138 47.8
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.7e-15 87.0 137 46.0
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 8.5e-15 84.7 157 44.6
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 8.5e-15 84.7 113 55.8
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.4e-14 84.0 156 44.2
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.9e-14 83.6 139 48.2
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.9e-14 83.6 170 42.4
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.5e-14 83.2 155 43.9
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.5e-14 83.2 128 50.8
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 4.2e-14 82.4 128 50.8
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 5.5e-14 82.0 146 43.8
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 5.5e-14 82.0 139 44.6
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 7.2e-14 81.6 137 42.3
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 7.2e-14 81.6 137 42.3
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 7.2e-14 81.6 137 42.3
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 1.2e-13 80.9 140 45.7
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 1.2e-13 80.9 112 50.0
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 1.2e-13 80.9 140 46.4
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 1.2e-13 80.9 112 50.0
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-13 80.9 137 48.9
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-13 80.9 145 47.6
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 1.6e-13 80.5 116 49.1
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.6e-13 80.5 140 45.7
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.6e-13 80.5 140 45.7
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.6e-13 80.5 138 48.6
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.1e-13 80.1 150 43.3
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 2.1e-13 80.1 137 42.3
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 4.6e-13 79.0 112 50.9
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 4.6e-13 79.0 139 45.3
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 4.6e-13 79.0 140 47.1
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 4.6e-13 79.0 140 47.1
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 4.6e-13 79.0 140 47.1
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 4.6e-13 79.0 56 78.6
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 6.1e-13 78.6 108 48.1
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 6.1e-13 78.6 131 45.8
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 1.0e-12 77.8 124 46.8
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-12 77.8 112 49.1
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 1.0e-12 77.8 137 43.8
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 1.4e-12 77.4 105 53.3
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.4e-12 77.4 166 40.4
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 1.4e-12 77.4 155 43.9
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 2.3e-12 76.6 165 38.8
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 2.3e-12 76.6 131 42.0
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 3.0e-12 76.3 138 44.2
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 3.0e-12 76.3 137 43.8
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 3.9e-12 75.9 149 41.6
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 3.9e-12 75.9 149 41.6
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.9e-12 75.9 105 45.7
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 6.7e-12 75.1 135 43.0
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 6.7e-12 75.1 131 43.5
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 8.8e-12 74.7 104 50.0
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 8.8e-12 74.7 136 44.9
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 8.8e-12 74.7 104 50.0
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 8.8e-12 74.7 116 46.6
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 8.8e-12 74.7 135 44.4
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-11 74.3 180 38.3
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 1.1e-11 74.3 138 44.2
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.3e-11 72.4 134 44.8
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 4.3e-11 72.4 143 43.4
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 9.7e-11 71.2 83 51.8
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 9.7e-11 71.2 64 60.9
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-10 70.9 117 43.6
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 2.8e-10 69.7 158 38.6
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.8e-10 69.7 144 44.4
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 4.8e-10 68.9 61 67.2
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 8.2e-10 68.2 126 41.3
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 8.2e-10 68.2 80 57.5
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.4e-09 67.4 63 66.7
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 2.4e-09 66.6 99 50.5
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 4.1e-09 65.9 76 53.9
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 1.2e-08 64.3 112 43.8
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.5e-08 63.9 77 53.2
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 7.7e-08 61.6 137 38.7
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.0e-07 61.2 134 38.8
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 1.0e-07 61.2 137 39.4
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.0e-07 61.2 128 41.4
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 1.7e-07 60.5 65 55.4
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 3.8e-07 59.3 50 66.0
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 4.2e-06 55.8 93 46.2


User provided reference genes

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