Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 4.5e-225 784.3 395 100.0
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 7.4e-127 458.0 406 63.8
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 1.1e-125 454.1 414 60.6
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 1.4e-122 443.7 331 69.8
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.1e-121 439.9 397 61.5
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 9.7e-119 431.0 407 58.0
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 3.7e-118 429.1 405 59.0
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.8e-117 426.8 397 59.9
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 2.2e-115 419.9 404 58.2
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 6.5e-115 418.3 400 60.2
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 6.5e-115 418.3 400 56.5
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 3.2e-114 416.0 407 55.5
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 4.2e-114 415.6 405 58.5
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 3.9e-112 409.1 406 58.4
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 8.8e-112 407.9 410 57.3
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 2.0e-111 406.8 395 60.8
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.7e-110 403.7 404 56.2
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 2.2e-110 403.3 399 58.4
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 2.8e-110 402.9 398 56.3
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 4.5e-108 395.6 399 56.6
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 7.7e-108 394.8 419 54.7
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 9.4e-106 387.9 405 54.8
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 1.6e-105 387.1 405 55.6
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 2.7e-105 386.3 421 54.9
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 4.7e-105 385.6 396 58.6
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 3.3e-103 379.4 302 66.2
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 9.7e-103 377.9 348 59.5
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 2.8e-102 376.3 408 54.9
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 1.4e-101 374.0 399 56.9
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 1.4e-101 374.0 399 56.9
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 2.0e-100 370.2 298 65.8
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 3.5e-100 369.4 304 64.1
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 5.9e-100 368.6 432 53.0
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 1.3e-99 367.5 518 46.5
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 4.2e-98 362.5 421 52.5
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 5.5e-98 362.1 366 57.9
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 9.4e-98 361.3 412 51.7
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 1.2e-97 360.9 422 51.9
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 2.1e-97 360.1 405 52.8
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 5.2e-96 355.5 416 51.7
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 1.2e-95 354.4 295 65.8
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 4.4e-95 352.4 366 57.7
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 6.3e-94 348.6 314 61.8
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 8.3e-94 348.2 366 56.0
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.1e-93 347.8 403 52.9
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 1.8e-93 347.1 431 53.4
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 1.6e-92 344.0 298 62.1
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 5.9e-92 342.0 405 51.4
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 7.7e-92 341.7 298 61.7
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 7.7e-92 341.7 520 44.4
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.0e-91 341.3 389 51.9
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.7e-91 340.5 403 50.9
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 1.1e-90 337.8 298 60.4
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.9e-90 337.0 403 49.6
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 2.5e-90 336.7 300 62.0
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 1.2e-89 334.3 456 47.8
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 1.6e-89 334.0 368 54.1
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 4.7e-89 332.4 298 63.1
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 6.1e-89 332.0 398 51.5
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 6.1e-89 332.0 392 51.8
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.4e-88 330.9 398 54.3
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 3.4e-87 326.2 301 58.5
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 9.8e-87 324.7 418 48.1
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 3.7e-86 322.8 302 60.9
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 8.3e-86 321.6 411 49.6
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 7.0e-85 318.5 395 49.6
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 9.2e-85 318.2 427 48.2
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 3.5e-84 316.2 482 44.6
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 1.8e-80 303.9 396 50.3
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 5.2e-80 302.4 405 48.1
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 2.0e-79 300.4 450 44.7
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 2.2e-78 297.0 340 52.1
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 4.9e-78 295.8 299 55.9
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 4.9e-78 295.8 304 56.2
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 4.9e-78 295.8 414 46.9
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 1.2e-76 291.2 304 52.3
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 1.2e-76 291.2 428 45.6
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 2.0e-76 290.4 431 45.5
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 3.9e-75 286.2 312 53.5
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 2.0e-71 273.9 399 50.9
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 6.4e-70 268.9 491 40.1
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 1.9e-69 267.3 230 61.7
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 8.6e-67 258.5 278 52.9
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 1.8e-64 250.8 411 44.3
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.2e-63 248.1 395 44.6
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 2.6e-63 246.9 459 39.0
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.6e-63 246.9 407 44.0
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 3.7e-62 243.0 405 43.5
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 4.9e-62 242.7 474 37.8
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 6.4e-62 242.3 376 45.5
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 8.9e-56 221.9 421 39.9
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 1.5e-55 221.1 232 55.2
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 2.6e-55 220.3 464 37.1
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 3.8e-54 216.5 313 48.2
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.1e-53 214.9 481 37.0
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 3.2e-53 213.4 414 40.1
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 2.7e-52 210.3 412 43.2
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 8.7e-51 205.3 422 41.0
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 1.2e-49 201.4 412 38.3
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.2e-49 201.4 421 39.0
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 4.0e-48 196.4 514 36.6
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 6.9e-48 195.7 410 40.7
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 5.8e-47 192.6 227 49.8
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 2.2e-46 190.7 197 49.2
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 3.2e-45 186.8 400 39.5
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 6.0e-44 182.6 284 47.2
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 2.3e-43 180.6 405 38.5
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 5.6e-42 176.0 396 38.9
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.6e-41 174.5 396 38.1
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 8.1e-41 172.2 237 48.1
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 3.1e-40 170.2 300 41.7
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 2.0e-39 167.5 307 39.7
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.3e-38 164.9 311 39.5
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 1.3e-35 154.8 288 42.4
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 3.3e-34 150.2 392 37.8
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 9.6e-34 148.7 274 43.4
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 1.3e-33 148.3 401 35.4
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 6.2e-33 146.0 407 36.4
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 6.2e-33 146.0 407 36.4
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 9.3e-29 132.1 429 32.2
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 1.2e-28 131.7 294 39.5
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.8e-24 117.9 334 32.6
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 2.6e-23 114.0 307 33.9
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 7.6e-23 112.5 283 36.7
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.3e-22 111.7 414 31.9
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 4.6e-20 103.2 346 32.1
Oeu064594.1 Olea europaea HOM05D005514 ORTHO05D006563 6.7e-19 99.4 69 76.8
Lsat_1_v5_gn_5_102961 Lactuca sativa HOM05D005514 ORTHO05D006563 1.5e-15 88.2 77 59.7
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 7.7e-15 85.9 92 52.2
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 8.5e-14 82.4 234 36.3
Cc06_g09940 Coffea canephora HOM05D005514 ORTHO05D006563 2.7e-12 77.4 71 69.0
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.4e-11 75.1 119 42.0
MD15G1181500 Malus domestica HOM05D005514 ORTHO05D006563 2.3e-11 74.3 64 60.9
COL.COLO4_34822 Corchorus olitorius HOM05D005514 ORTHO05D006563 2.0e-10 71.2 81 63.0
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 2.2e-09 67.8 37 73.0
Lalb_Chr24g0397411 Lupinus albus HOM05D005514 ORTHO05D006563 6.5e-06 56.2 74 44.6


User provided reference genes

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