Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002241.1 Olea europaea HOM05D003689 ORTHO05D003950 8.3e-100 368.6 556 100.0
Cc06_g09790 Coffea canephora HOM05D003689 ORTHO05D003950 8.8e-33 146.0 557 77.0
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.1e-32 145.6 165 82.4
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.5e-32 145.2 165 82.4
DCAR_012069 Daucus carota HOM05D001279 ORTHO05D001636 7.4e-32 142.9 165 79.4
PGSC0003DMG400024327 Solanum tuberosum HOM05D003689 ORTHO05D003950 9.7e-32 142.5 165 81.8
Sopen07g016320 Solanum pennellii HOM05D003689 ORTHO05D003950 2.4e-30 137.9 165 80.6
Peaxi162Scf00231g00023 Petunia axillaris HOM05D003689 ORTHO05D003950 7.0e-30 136.3 165 80.6
Dinv41614 Davidia involucrata HOM05D003689 ORTHO05D003950 2.6e-29 134.4 165 78.8
CAN.G238.2 Capsicum annuum HOM05D003689 ORTHO05D003950 5.9e-29 133.3 165 80.0
Nitab4.5_0000114g0090 Nicotiana tabacum HOM05D003689 ORTHO05D003950 7.7e-29 132.9 165 80.0
Nitab4.5_0004562g0020 Nicotiana tabacum HOM05D003689 ORTHO05D003950 7.7e-29 132.9 165 80.0
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 5.0e-28 130.2 165 76.4
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 1.4e-27 128.6 165 75.8
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 1.4e-27 128.6 165 75.2
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 2.5e-27 127.9 165 73.9
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 4.2e-27 127.1 152 44.1
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 5.5e-27 126.7 165 73.3
TAR624G0802 Trochodendron aralioides HOM05D003689 ORTHO05D003950 5.5e-27 126.7 165 76.4
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 7.2e-27 126.3 165 73.9
FAN23G2461 Fragaria x ananassa HOM05D003689 ORTHO05D003950 7.2e-27 126.3 165 73.9
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 7.2e-27 126.3 165 74.5
Lalb_Chr05g0222931 Lupinus albus HOM05D003689 ORTHO05D003950 7.2e-27 126.3 165 40.6
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 9.4e-27 125.9 165 75.8
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 9.4e-27 125.9 165 75.2
Eucgr.C03818 Eucalyptus grandis HOM05D003689 ORTHO05D003950 3.6e-26 124.0 165 74.5
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 4.7e-26 123.6 165 73.3
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 6.1e-26 123.2 165 72.1
Rhsim01G0097100 Rhododendron simsii HOM05D003689 ORTHO05D003950 6.1e-26 123.2 165 67.9
Lj7A652T76 Lonicera japonica HOM05D003689 ORTHO05D003950 1.0e-25 122.5 165 75.2
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 1.4e-25 122.1 165 76.4
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 1.8e-25 121.7 165 75.2
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 3.0e-25 120.9 165 73.3
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 3.9e-25 120.6 165 74.5
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 5.2e-25 120.2 165 71.5
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 8.8e-25 119.4 165 72.1
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 1.1e-24 119.0 165 73.9
Glyma.08G038200 Glycine max HOM05D003689 ORTHO05D003950 2.0e-24 118.2 165 73.3
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 3.3e-24 117.5 164 73.8
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 4.4e-24 117.1 165 38.2
DCAR_004497 Daucus carota HOM05D003689 ORTHO05D003950 4.4e-24 117.1 165 46.1
Ca_17333_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 5.7e-24 116.7 165 72.1
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 5.7e-24 116.7 165 51.5
Prupe.7G232600 Prunus persica HOM05D003689 ORTHO05D003950 7.4e-24 116.3 165 72.1
VMungo0331G0581 Vigna mungo HOM05D003689 ORTHO05D003950 9.7e-24 115.9 165 72.7
Phvul.010G165600 Phaseolus vulgaris HOM05D003689 ORTHO05D003950 1.7e-23 115.2 165 72.1
THA.LOC104811116 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 3.7e-23 114.0 165 71.5
Glyma.05G230700 Glycine max HOM05D003689 ORTHO05D003950 6.3e-23 113.2 165 72.1
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 8.2e-23 112.8 165 69.1
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 8.2e-23 112.8 165 69.1
MELO3C003585.2 Cucumis melo HOM05D003689 ORTHO05D003950 8.2e-23 112.8 165 55.2
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 8.2e-23 112.8 167 35.9
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 1.1e-22 112.5 165 69.7
Sed0017853 Sechium edule HOM05D003689 ORTHO05D003950 1.4e-22 112.1 165 71.5
Sc18g0001340 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.8e-22 111.7 165 66.7
Actinidia31220 Actinidia chinensis HOM05D003689 ORTHO05D003950 2.4e-22 111.3 167 70.7
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 2.4e-22 111.3 167 42.5
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 2.4e-22 111.3 165 70.3
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 2.4e-22 111.3 165 70.9
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 2.4e-22 111.3 165 71.5
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.1e-22 110.9 165 70.3
AT5G21222 Arabidopsis thaliana HOM05D000055 ORTHO05D003950 4.1e-22 110.5 165 70.9
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 4.1e-22 110.5 167 35.9
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 5.3e-22 110.2 165 71.5
arahy.Tifrunner.gnm1.ann1.Z43HYI Arachis hypogaea HOM05D003689 ORTHO05D003950 7.0e-22 109.8 165 70.9
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 7.0e-22 109.8 167 34.7
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 7.0e-22 109.8 167 44.9
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 7.0e-22 109.8 165 72.1
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 1.2e-21 109.0 165 68.5
Thhalv10012659m.g Eutrema salsugineum HOM05D000055 ORTHO05D003950 1.2e-21 109.0 165 69.7
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.2e-21 109.0 165 69.7
Sp6g23340 Schrenkiella parvula HOM05D000055 ORTHO05D003950 1.2e-21 109.0 165 69.7
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 1.6e-21 108.6 165 66.7
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 2.0e-21 108.2 165 50.9
Carub.0006s1949 Capsella rubella HOM05D000055 ORTHO05D003950 2.0e-21 108.2 165 69.7
Lalb_Chr16g0388171 Lupinus albus HOM05D003689 ORTHO05D003950 2.0e-21 108.2 165 70.3
Hund09215 Selenicereus undatus HOM05D003689 ORTHO05D003950 2.0e-21 108.2 165 66.1
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 2.6e-21 107.8 165 69.7
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 4.5e-21 107.1 165 69.1
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 4.5e-21 107.1 165 69.7
Glyma.14G141800 Glycine max HOM05D003689 ORTHO05D003950 5.9e-21 106.7 165 68.5
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 7.7e-21 106.3 167 34.1
CARHR191690 Cardamine hirsuta HOM05D000055 ORTHO05D003950 1.0e-20 105.9 165 69.7
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 1.0e-20 105.9 165 67.9
AL6G32800 Arabidopsis lyrata HOM05D000055 ORTHO05D003950 1.3e-20 105.5 165 69.1
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 1.3e-20 105.5 165 70.9
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 1.3e-20 105.5 165 69.1
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 2.2e-20 104.8 167 61.7
A10p18880 Brassica napus HOM05D000055 ORTHO05D003950 2.2e-20 104.8 165 69.1
C09p54880 Brassica napus HOM05D000055 ORTHO05D003950 2.2e-20 104.8 165 69.1
BolC9t58349H Brassica oleracea HOM05D000055 ORTHO05D003950 2.2e-20 104.8 165 69.1
BraA10t43967Z Brassica rapa HOM05D000055 ORTHO05D003950 2.2e-20 104.8 165 69.1
Eucgr.C02891 Eucalyptus grandis HOM05D003689 ORTHO05D003950 2.2e-20 104.8 164 69.5
THA.LOC104799204 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 2.9e-20 104.4 167 61.1
ClCG06G008630 Citrullus lanatus HOM05D003689 ORTHO05D003950 3.8e-20 104.0 165 69.7
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 3.8e-20 104.0 165 66.7
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 6.5e-20 103.2 167 63.5
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 6.5e-20 103.2 167 63.5
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 6.5e-20 103.2 167 63.5
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 6.5e-20 103.2 165 55.2
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 6.5e-20 103.2 165 69.7
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea HOM05D003689 ORTHO05D003950 8.5e-20 102.8 165 69.1
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 8.5e-20 102.8 167 34.1
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 8.5e-20 102.8 167 63.5
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 8.5e-20 102.8 167 63.5
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 1.5e-19 102.1 165 35.8
EL10Ac8g18468 Beta vulgaris HOM05D003689 ORTHO05D003950 1.9e-19 101.7 160 39.4
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.9e-19 101.7 165 55.8
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 1.9e-19 101.7 165 33.9
PGR044G1205 Punica granatum HOM05D003689 ORTHO05D003950 1.9e-19 101.7 165 67.3
MELO3C025352.2 Cucumis melo HOM05D003689 ORTHO05D003950 4.2e-19 100.5 165 69.1
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 9.4e-19 99.4 165 48.5
CSS0016195 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 9.4e-19 99.4 55 83.6
Aqoxy7G03846 Aquilegia oxysepala HOM05D003689 ORTHO05D003950 1.2e-18 99.0 165 70.3
HanXRQChr06g0180011 Helianthus annuus HOM05D003689 ORTHO05D003950 1.2e-18 99.0 165 70.3
Sc23g0005900 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.2e-18 99.0 165 67.3
CsaV3_1G025520 Cucumis sativus L. HOM05D003689 ORTHO05D003950 1.6e-18 98.6 165 68.5
arahy.Tifrunner.gnm1.ann1.SBHH31 Arachis hypogaea HOM05D003689 ORTHO05D003950 2.1e-18 98.2 165 67.9
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea HOM05D003689 ORTHO05D003950 3.6e-18 97.4 165 67.9
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 3.6e-18 97.4 165 64.8
arahy.Tifrunner.gnm1.ann1.3U27PV Arachis hypogaea HOM05D003689 ORTHO05D003950 4.7e-18 97.1 165 67.9
Lalb_Chr14g0362401 Lupinus albus HOM05D003689 ORTHO05D003950 4.7e-18 97.1 165 67.3
arahy.Tifrunner.gnm1.ann1.EDC6ME Arachis hypogaea HOM05D003689 ORTHO05D003950 6.1e-18 96.7 165 67.3
arahy.Tifrunner.gnm1.ann1.K2CPZ4 Arachis hypogaea HOM05D003689 ORTHO05D003950 6.1e-18 96.7 165 67.3
MBI04_g29969_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 6.1e-18 96.7 165 67.3
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 1.4e-17 95.5 165 69.1
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 3.0e-17 94.4 165 66.7
Lalb_Chr14g0371561 Lupinus albus HOM05D003689 ORTHO05D003950 3.0e-17 94.4 165 68.5
SGA_v2.0_scaffold163G38088 Striga asiatica HOM05D003689 ORTHO05D003950 3.0e-17 94.4 165 64.8
Atru.chr7.2161 Acer truncatum HOM05D003689 ORTHO05D003950 6.7e-17 93.2 165 66.1
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 6.7e-17 93.2 165 66.7
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 6.7e-17 93.2 165 66.7
MSTRG.6008 Avicennia marina HOM05D003689 ORTHO05D003950 8.8e-17 92.8 140 43.6
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 8.8e-17 92.8 165 67.9
Lsat_1_v5_gn_8_95421 Lactuca sativa HOM05D003689 ORTHO05D003950 8.8e-17 92.8 165 69.7
Solyc07g032380.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.5e-16 92.0 54 79.6
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 2.0e-16 91.7 165 63.6
Migut.J01154 Erythranthe guttata HOM05D003689 ORTHO05D003950 5.7e-16 90.1 57 71.9
Ca_12812_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 2.8e-15 87.8 165 65.5
Actinidia32678 Actinidia chinensis HOM05D003689 ORTHO05D003950 8.2e-15 86.3 49 81.6
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 8.2e-15 86.3 165 64.2
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 8.2e-15 86.3 54 72.2
COL.COLO4_34846 Corchorus olitorius HOM05D001279 ORTHO05D001636 1.4e-14 85.5 165 66.7
PGR102G1523 Punica granatum HOM05D003689 ORTHO05D003950 1.4e-14 85.5 165 65.5
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 1.8e-14 85.1 58 65.5
Ah.14g082150 Amaranthus hybridus HOM05D003689 ORTHO05D003950 4.1e-14 84.0 165 62.4
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 5.3e-14 83.6 165 65.5
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 5.3e-14 83.6 165 65.5
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 1.2e-13 82.4 49 75.5
EL10Ac8g18479 Beta vulgaris HOM05D003689 ORTHO05D003950 2.0e-13 81.6 165 59.4
BcaC04g19516 Brassica carinata HOM05D000055 ORTHO05D000057 2.0e-13 81.6 61 57.4
ECA238G3870 Erigeron canadensis HOM05D003689 ORTHO05D009814 2.0e-13 81.6 165 67.3
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 2.0e-13 81.6 57 63.2
AUR62021489 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.7e-13 81.3 165 62.4
Actinidia32677 Actinidia chinensis HOM05D001279 ORTHO05D003950 3.5e-13 80.9 45 82.2
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 3.5e-13 80.9 165 64.2
MD02G1045100 Malus domestica HOM05D003689 ORTHO05D003950 4.5e-13 80.5 59 69.5
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 4.5e-13 80.5 165 59.4
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 4.5e-13 80.5 165 59.4
AUR62010979 Chenopodium quinoa HOM05D003689 ORTHO05D003950 7.7e-13 79.7 165 61.8
Nn7g35992 Nelumbo nucifera HOM05D003689 ORTHO05D003950 1.7e-12 78.6 45 71.1
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 8.5e-12 76.3 165 58.2
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 1.1e-11 75.9 165 58.8
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 1.5e-11 75.5 165 61.2
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 2.5e-11 74.7 63 54.0
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 2.5e-11 74.7 121 38.8
Cpa.g.sc78.82 Carica papaya HOM05D003689 ORTHO05D003950 3.2e-11 74.3 45 71.1
MBI04_g43860_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 3.2e-11 74.3 141 37.6
Lj4g0026082 Lotus japonicus HOM05D003689 ORTHO05D003950 5.5e-11 73.6 53 66.0
EL10Ac8g18465 Beta vulgaris HOM05D003689 ORTHO05D003950 9.4e-11 72.8 42 76.2
EL10Ac8g18466 Beta vulgaris HOM05D003689 ORTHO05D003950 9.4e-11 72.8 42 76.2
EL10Ac8g18472 Beta vulgaris HOM05D003689 ORTHO05D003950 9.4e-11 72.8 42 76.2
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 1.6e-10 72.0 165 61.8
Cpa.g.sc23.95 Carica papaya HOM05D003689 ORTHO05D003950 2.1e-10 71.6 41 75.6
Migut.E01508 Erythranthe guttata HOM05D003689 ORTHO05D003950 2.1e-10 71.6 44 65.9
Medtr8g103480 Medicago truncatula HOM05D003689 ORTHO05D003950 8.0e-10 69.7 165 60.0
Os01g0228400 Oryza sativa ssp. japonica HOM05D003689 ORTHO05D003950 4.4e-08 63.9 56 50.0
Psat7g013440 Pisum sativum HOM05D003689 ORTHO05D003950 4.4e-08 63.9 42 59.5
FAN23G2385 Fragaria x ananassa HOM05D003689 ORTHO05D003950 8.3e-07 59.7 122 34.4
Nn8g39148 Nelumbo nucifera HOM05D003689 ORTHO05D003950 1.4e-06 58.9 114 32.5
Pp3c16_9240 Physcomitrium patens HOM05D041143 ORTHO05D003950 1.8e-06 58.5 165 57.0
Psat0s586g0040 Pisum sativum HOM05D003689 ORTHO05D003950 1.8e-06 58.5 48 62.5
ECA234G0433 Erigeron canadensis HOM05D003689 ORTHO05D003950 3.1e-06 57.8 38 65.8


User provided reference genes

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