Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 1.3e-85 319.7 161 100.0
Oeu049536.1 Olea europaea HOM05D003766 ORTHO05D004607 2.5e-33 146.0 164 53.0
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 5.0e-21 105.1 165 41.8
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 6.5e-21 104.8 165 42.4
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 2.5e-20 102.8 163 42.3
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 2.1e-19 99.8 159 43.4
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 1.0e-18 97.4 165 42.4
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 1.0e-18 97.4 159 43.4
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.8e-18 96.7 164 40.2
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 2.6e-17 92.8 149 43.6
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 3.3e-17 92.4 159 43.4
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 9.7e-17 90.9 160 40.0
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 9.7e-17 90.9 167 40.7
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 9.7e-17 90.9 170 40.6
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 2.8e-16 89.4 161 41.6
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 6.3e-16 88.2 163 38.0
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.1e-15 87.4 167 38.9
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 1.4e-15 87.0 157 36.9
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.4e-15 87.0 154 38.3
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.4e-15 87.0 167 38.3
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 3.1e-15 85.9 154 37.7
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 3.1e-15 85.9 154 39.0
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 4.1e-15 85.5 156 35.9
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 5.3e-15 85.1 157 37.6
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 9.1e-15 84.3 155 36.8
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 9.1e-15 84.3 163 38.0
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 9.1e-15 84.3 162 36.4
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 9.1e-15 84.3 166 36.1
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 9.1e-15 84.3 160 38.1
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 1.5e-14 83.6 154 37.0
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 1.5e-14 83.6 169 36.7
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 1.5e-14 83.6 158 37.3
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 1.5e-14 83.6 163 36.2
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 2.0e-14 83.2 154 37.0
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 2.0e-14 83.2 157 36.9
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 2.0e-14 83.2 157 37.6
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 2.0e-14 83.2 157 37.6
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 2.6e-14 82.8 66 63.6
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 2.6e-14 82.8 169 36.7
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 3.4e-14 82.4 163 37.4
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 3.4e-14 82.4 166 34.9
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 4.5e-14 82.0 159 38.4
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 5.9e-14 81.6 152 37.5
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 5.9e-14 81.6 152 37.5
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 5.9e-14 81.6 152 37.5
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 7.7e-14 81.3 187 35.8
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 7.7e-14 81.3 171 35.1
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.0e-13 80.9 154 35.7
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 1.0e-13 80.9 166 37.3
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.0e-13 80.9 156 36.5
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 1.3e-13 80.5 65 60.0
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.3e-13 80.5 170 32.9
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 1.7e-13 80.1 149 36.9
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 1.7e-13 80.1 164 37.8
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 2.2e-13 79.7 80 52.5
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 3.8e-13 79.0 80 52.5
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 3.8e-13 79.0 148 38.5
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 6.5e-13 78.2 162 36.4
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 6.5e-13 78.2 159 35.8
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.1e-12 77.4 161 37.3
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 1.1e-12 77.4 168 33.9
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 1.1e-12 77.4 167 33.5
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.4e-12 77.0 149 36.9
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 1.4e-12 77.0 159 37.1
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 1.9e-12 76.6 176 35.2
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.9e-12 76.6 160 36.9
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.9e-12 76.6 167 34.7
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 2.5e-12 76.3 169 33.7
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 4.2e-12 75.5 169 37.3
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 5.5e-12 75.1 162 35.8
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 7.2e-12 74.7 162 37.0
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 7.2e-12 74.7 87 47.1
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 7.2e-12 74.7 167 35.3
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 9.4e-12 74.3 149 36.2
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.2e-11 73.9 180 31.1
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 1.6e-11 73.6 160 36.2
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.6e-11 73.6 161 37.3
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 1.6e-11 73.6 187 33.7
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 1.6e-11 73.6 167 37.1
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 1.6e-11 73.6 164 35.4
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 1.6e-11 73.6 74 52.7
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.1e-11 73.2 175 33.7
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 2.1e-11 73.2 79 46.8
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 2.1e-11 73.2 170 37.1
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 2.7e-11 72.8 168 31.5
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 3.6e-11 72.4 158 34.2
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 4.7e-11 72.0 149 36.2
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 4.7e-11 72.0 133 36.8
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 6.1e-11 71.6 148 35.8
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 6.1e-11 71.6 163 34.4
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.1e-11 71.6 170 35.9
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.1e-11 71.6 169 36.1
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 8.0e-11 71.2 171 33.3
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 1.0e-10 70.9 165 35.2
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 1.4e-10 70.5 163 34.4
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 1.4e-10 70.5 154 34.4
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 1.4e-10 70.5 170 34.7
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.4e-10 70.5 62 53.2
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 1.4e-10 70.5 65 53.8
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.3e-10 69.7 169 35.5
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 2.3e-10 69.7 163 32.5
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 2.3e-10 69.7 168 32.1
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 2.3e-10 69.7 155 34.2
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.0e-10 69.3 61 54.1
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 3.0e-10 69.3 164 35.4
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 3.9e-10 68.9 65 52.3
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 3.9e-10 68.9 163 35.0
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 5.2e-10 68.6 145 36.6
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 5.2e-10 68.6 150 36.7
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 5.2e-10 68.6 93 41.9
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 6.7e-10 68.2 63 52.4
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 6.7e-10 68.2 63 52.4
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 6.7e-10 68.2 65 55.4
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 6.7e-10 68.2 156 35.3
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 8.8e-10 67.8 79 45.6
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 8.8e-10 67.8 65 50.8
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 8.8e-10 67.8 65 52.3
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 1.1e-09 67.4 164 32.9
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.5e-09 67.0 62 56.5
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.0e-09 66.6 65 49.2
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 4.4e-09 65.5 61 52.5
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 7.4e-09 64.7 61 55.7
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 9.7e-09 64.3 67 50.7
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 9.7e-09 64.3 144 34.0
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.3e-08 63.9 168 32.7
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 1.3e-08 63.9 64 50.0
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 1.3e-08 63.9 154 31.2
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 1.7e-08 63.5 59 52.5
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 3.7e-08 62.4 169 29.6
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 4.8e-08 62.0 161 31.7
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 6.3e-08 61.6 161 31.7
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 8.2e-08 61.2 58 51.7
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 8.2e-08 61.2 160 31.9
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 1.1e-07 60.8 122 36.9
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 1.8e-07 60.1 129 36.4
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.6e-06 57.0 52 51.9
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 2.0e-06 56.6 118 33.9
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 7.7e-06 54.7 85 37.6
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 7.7e-06 54.7 81 39.5


User provided reference genes

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