Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 2357.0 1205 100.0
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 2071.6 1206 89.2
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1852.0 1209 80.2
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1835.8 1210 80.0
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1823.1 1210 78.9
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1819.7 1208 78.7
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1784.2 1208 77.3
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1781.9 1208 77.9
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1770.0 1210 76.1
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1760.7 1209 77.2
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1760.0 1210 75.8
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1758.4 1194 76.9
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1756.5 1210 75.9
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1755.3 1209 75.9
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1750.3 1209 75.9
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1749.6 1207 75.5
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1747.3 1209 77.3
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1746.9 1207 75.4
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1745.7 1211 75.8
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1745.3 1209 75.7
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1743.4 1210 75.1
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1740.7 1210 75.3
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1740.3 1210 75.0
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1738.8 1210 75.0
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1736.9 1210 75.4
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1736.1 1209 75.8
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1736.1 1210 75.1
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1725.7 1221 74.7
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1723.4 1212 74.5
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1721.1 1239 74.3
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1720.3 1228 73.5
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1719.9 1209 74.9
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1719.1 1211 74.9
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1713.0 1211 75.1
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1712.2 1206 75.2
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1711.4 1205 74.4
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1711.4 1211 73.7
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1708.7 1221 74.4
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1706.8 1211 73.6
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1699.1 1210 74.4
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1698.3 1210 73.3
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1691.0 1227 73.5
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1689.5 1212 73.3
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1689.5 1255 72.4
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1688.3 1259 72.1
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1686.0 1259 72.0
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1685.2 1212 73.0
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1684.8 1207 72.9
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1683.3 1226 72.8
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1681.8 1205 74.4
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1681.0 1211 73.2
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1679.5 1226 72.6
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1679.1 1259 71.9
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1678.3 1212 72.2
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1677.9 1267 70.0
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1677.5 1208 73.3
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 1676.4 1247 72.6
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 1671.8 1248 72.2
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1669.8 1235 72.3
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1669.8 1235 72.0
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1666.7 1211 73.1
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1665.6 1215 72.3
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 1661.4 1210 73.1
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1659.8 1210 72.6
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1657.5 1208 72.4
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1656.0 1211 72.3
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1652.1 1210 71.7
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1651.3 1209 72.0
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1651.0 1210 72.1
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1650.6 1216 72.0
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1647.9 1209 71.8
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1646.7 1208 71.1
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1641.3 1211 71.4
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1636.7 1209 71.1
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1634.4 1243 70.1
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1633.6 1219 71.1
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1626.7 1209 71.7
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1626.7 1209 71.5
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1625.1 1219 70.4
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1622.8 1231 70.1
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1622.4 1210 71.3
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1622.1 1206 71.4
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1620.1 1205 72.4
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1614.4 1270 67.9
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1614.0 1218 70.5
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1608.2 1212 71.0
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1604.0 1213 69.2
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1603.2 1208 70.9
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1596.3 1228 70.1
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 1595.1 1209 69.6
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 1594.3 1209 69.5
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1592.4 1210 69.7
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 1592.0 1209 69.3
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1591.6 1221 69.4
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1591.6 1212 69.2
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 1588.9 1215 69.3
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 1585.9 1209 69.3
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1583.9 1210 69.3
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 1583.9 1213 69.5
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1582.8 1210 69.5
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 1582.0 1220 69.3
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1581.6 1210 69.6
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1580.1 1271 67.5
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1575.8 1215 68.3
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1562.4 1101 73.9
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1562.4 1222 69.4
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1561.6 1109 73.4
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1560.8 1209 68.7
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1557.0 1213 68.4
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1554.7 1150 72.0
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1546.9 1208 69.8
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 1536.9 1156 70.7
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1526.9 1204 67.1
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1524.6 1214 68.4
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1523.5 1210 66.9
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1509.6 1210 66.4
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1501.1 1205 66.2
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1498.0 1205 65.9
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1468.0 984 78.3
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1449.1 1109 70.0
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1382.5 984 73.8
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1329.3 1063 68.6
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1294.3 1033 68.2
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1294.3 1004 68.7
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1278.5 1206 59.6
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1266.9 982 69.2
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1259.6 888 74.8
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1245.7 960 70.9
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1214.9 1015 67.2
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1202.2 811 78.3
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1198.7 1006 66.7
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1142.9 840 71.2
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1088.2 816 72.1
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1080.1 1203 55.4
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 8.2e-312 1074.7 808 70.7
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 8.8e-280 967.6 725 71.9
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 5.9e-276 954.9 1212 45.8
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 2.5e-274 949.5 576 83.2
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 1.6e-273 946.8 1247 45.0
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.2e-239 834.3 717 64.4
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 1.0e-235 821.2 604 74.2
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 3.9e-187 659.8 467 72.2
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 5.3e-160 569.7 396 72.7
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 5.2e-139 500.0 343 73.5
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 1.2e-135 488.8 933 39.3
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 3.5e-127 460.7 343 67.6
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 1.7e-126 458.4 343 67.3
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 4.6e-119 433.7 808 35.9
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 3.3e-117 427.6 652 43.1
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 7.8e-111 406.4 286 74.1
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 4.1e-104 384.0 1330 28.1
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 8.7e-94 349.7 265 66.4
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 1.6e-87 328.9 197 80.2
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 1.6e-84 318.9 182 83.5
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 2.0e-82 312.0 512 41.8
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 1.8e-78 298.9 278 61.5
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 3.1e-75 288.1 205 68.3
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 6.3e-68 263.8 259 61.4
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 4.1e-67 261.2 189 69.3
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 4.1e-67 261.2 142 90.1
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 6.9e-67 260.4 181 74.6
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 1.2e-55 223.0 187 64.2
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 2.4e-51 208.8 132 82.6
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 7.2e-48 197.2 152 70.4
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 1.0e-46 193.4 118 83.1
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 3.0e-46 191.8 142 70.4
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 2.8e-36 158.7 92 88.0
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 5.7e-29 134.4 86 76.7
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 7.5e-29 134.0 91 71.4
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 7.5e-29 134.0 91 71.4
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 5.7e-21 107.8 78 70.5
Nn3g20398 Nelumbo nucifera HOM05D003952 ORTHO05D005083 6.3e-20 104.4 83 67.5
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 2.3e-17 95.9 71 66.2
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 2.9e-17 95.5 59 76.3
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 4.3e-16 91.7 46 82.6
Lsat_1_v5_gn_5_15721 Lactuca sativa HOM05D001610 ORTHO05D001585 6.8e-14 84.3 107 51.4
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 4.6e-10 71.6 82 43.9


User provided reference genes

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