Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 6.6e-105 384.0 192 100.0
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 1.5e-80 303.1 194 82.0
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 1.0e-60 237.3 190 67.9
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 6.5e-60 234.6 196 64.8
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 7.2e-59 231.1 192 65.6
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 7.2e-59 231.1 189 65.1
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.6e-58 229.9 189 66.1
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 7.9e-58 227.6 201 61.2
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 3.9e-57 225.3 189 64.0
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 6.7e-57 224.6 189 63.0
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 1.1e-56 223.8 189 63.5
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 2.5e-56 222.6 195 64.6
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 4.3e-56 221.9 190 64.2
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 1.3e-55 220.3 195 63.1
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.8e-55 219.2 190 63.7
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 3.7e-55 218.8 189 63.0
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 3.7e-55 218.8 189 62.4
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 4.8e-55 218.4 191 61.8
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 8.2e-55 217.6 198 60.1
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 8.2e-55 217.6 189 61.9
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 1.4e-54 216.9 189 62.4
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 1.4e-54 216.9 191 61.8
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 1.8e-54 216.5 193 62.7
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 2.4e-54 216.1 189 61.9
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 2.4e-54 216.1 194 61.3
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 3.1e-54 215.7 189 61.9
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.2e-53 213.8 196 61.7
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 1.5e-53 213.4 190 62.6
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 2.0e-53 213.0 190 59.5
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 2.0e-53 213.0 189 63.5
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 2.0e-53 213.0 191 60.2
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 2.6e-53 212.6 189 59.8
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 3.4e-53 212.2 193 62.2
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 3.4e-53 212.2 189 61.9
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 4.5e-53 211.8 189 60.8
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 5.9e-53 211.5 189 59.8
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 7.7e-53 211.1 189 61.4
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 1.0e-52 210.7 194 63.9
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 1.0e-52 210.7 189 60.3
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.3e-52 210.3 204 60.3
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 1.7e-52 209.9 189 59.8
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 3.8e-52 208.8 197 59.4
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 1.1e-51 207.2 189 59.8
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 1.4e-51 206.8 189 59.8
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 1.9e-51 206.5 192 58.9
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 1.9e-51 206.5 189 61.4
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 2.5e-51 206.1 200 58.0
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 5.5e-51 204.9 191 59.7
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 7.2e-51 204.5 196 57.7
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 7.2e-51 204.5 189 58.7
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 1.2e-50 203.8 189 59.3
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 1.2e-50 203.8 189 57.7
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 2.1e-50 203.0 189 58.2
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 2.1e-50 203.0 191 59.7
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 3.6e-50 202.2 191 57.1
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 4.7e-50 201.8 191 56.0
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 4.7e-50 201.8 189 58.2
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 6.1e-50 201.4 189 59.8
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 6.1e-50 201.4 191 58.1
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.0e-49 200.7 194 59.3
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 1.0e-49 200.7 190 61.1
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.4e-49 200.3 191 58.1
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.8e-49 199.9 191 58.6
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 2.3e-49 199.5 196 57.1
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 3.0e-49 199.1 189 56.6
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 5.1e-49 198.4 191 59.2
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 8.8e-49 197.6 196 53.6
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 8.8e-49 197.6 198 58.1
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 8.8e-49 197.6 191 58.6
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.5e-48 196.8 191 58.6
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 2.0e-48 196.4 195 62.1
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 2.0e-48 196.4 191 58.1
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 3.3e-48 195.7 190 58.4
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 4.4e-48 195.3 189 56.1
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 4.4e-48 195.3 189 56.1
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 4.4e-48 195.3 191 56.5
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 4.4e-48 195.3 190 57.4
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.3e-47 193.7 191 57.1
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 1.3e-47 193.7 193 57.5
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 2.8e-47 192.6 192 57.3
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 3.7e-47 192.2 190 60.0
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 4.8e-47 191.8 190 55.8
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 6.3e-47 191.4 192 56.8
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 1.4e-46 190.3 190 57.4
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.4e-46 190.3 188 54.8
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 3.1e-46 189.1 187 58.3
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 3.1e-46 189.1 190 56.3
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 4.1e-46 188.7 200 54.5
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 5.3e-46 188.3 189 54.5
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 1.2e-45 187.2 199 52.8
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 1.5e-45 186.8 190 57.4
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 2.6e-45 186.0 190 56.8
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 7.7e-45 184.5 189 53.4
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 1.7e-44 183.3 190 54.2
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 2.9e-44 182.6 190 53.2
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 3.8e-44 182.2 189 57.1
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 3.8e-44 182.2 190 54.2
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 3.8e-44 182.2 191 53.4
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 6.5e-44 181.4 194 57.2
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 4.7e-42 175.3 193 56.0
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 1.0e-41 174.1 192 54.2
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 1.8e-41 173.3 207 53.6
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 3.0e-41 172.6 198 51.5
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 3.0e-41 172.6 197 52.8
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 2.6e-40 169.5 192 52.1
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 2.6e-40 169.5 194 52.1
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 3.3e-40 169.1 190 52.1
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 4.4e-40 168.7 192 52.6
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.7e-39 166.8 195 52.3
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.7e-39 166.8 197 51.3
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 1.1e-38 164.1 193 54.9
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 1.4e-38 163.7 218 45.0
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.8e-38 163.3 188 46.8
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 4.1e-38 162.2 198 52.0
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 9.1e-38 161.0 189 50.8
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.0e-36 157.5 191 50.8
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.3e-36 157.1 189 48.1
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.7e-36 156.8 207 51.2
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 2.2e-36 156.4 189 48.1
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 6.5e-36 154.8 193 48.7
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 6.5e-36 154.8 191 51.3
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 8.5e-36 154.5 194 48.5
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.9e-35 153.3 196 48.5
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 9.4e-35 151.0 191 48.2
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 3.6e-34 149.1 189 49.2
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 1.0e-33 147.5 191 47.6
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 1.2e-32 144.1 204 44.6
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 1.5e-32 143.7 174 48.9
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 2.8e-31 139.4 154 50.0
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 1.1e-30 137.5 152 52.6
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 1.2e-29 134.0 199 45.2
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 2.7e-29 132.9 189 45.0
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 4.5e-29 132.1 190 48.9
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.7e-28 130.2 189 41.8
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 3.8e-28 129.0 98 68.4
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 1.1e-27 127.5 190 44.2
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 1.5e-27 127.1 192 40.6
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 1.9e-27 126.7 191 42.4
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 1.9e-27 126.7 190 43.7
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 7.2e-27 124.8 189 41.8
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 9.4e-27 124.4 194 45.4
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 1.6e-26 123.6 192 41.1
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 1.6e-26 123.6 194 45.4
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 2.7e-26 122.9 194 44.3
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 4.7e-26 122.1 154 50.0
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 1.0e-25 120.9 202 42.6
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.0e-25 120.9 193 40.9
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 2.0e-24 116.7 192 39.1
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 3.4e-24 115.9 190 38.4
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 3.4e-24 115.9 207 43.0
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 4.4e-24 115.5 189 38.1
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 4.4e-24 115.5 195 41.0
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 5.7e-24 115.2 211 38.9
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 1.7e-23 113.6 189 37.0
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 4.8e-23 112.1 191 40.3
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 1.1e-22 110.9 189 36.5
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 1.1e-22 110.9 189 36.5
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 1.4e-22 110.5 189 40.2
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 9.1e-22 107.8 192 38.5
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 1.6e-21 107.1 191 39.3
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 1.6e-21 107.1 197 40.6
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 4.5e-21 105.5 189 39.2
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 2.9e-20 102.8 198 38.9
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 7.2e-19 98.2 206 37.9
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 2.8e-18 96.3 186 37.1
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 2.8e-18 96.3 90 57.8
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 3.0e-17 92.8 197 37.1
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 1.5e-16 90.5 159 40.9
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 9.8e-16 87.8 214 36.9
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 1.8e-14 83.6 153 39.9
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 8.9e-09 64.7 147 38.1
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 1.5e-08 63.9 161 34.8
MBI01_g34161_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 2.6e-08 63.2 142 35.2
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 4.1e-06 55.8 156 35.3


User provided reference genes

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