Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 3.6e-172 608.2 317 100.0
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.4e-139 500.0 314 79.3
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 4.0e-139 498.4 303 81.8
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.2e-138 496.9 303 81.2
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.5e-138 496.5 313 80.2
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 3.4e-138 495.4 303 80.5
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.3e-137 493.4 314 79.3
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 2.8e-137 492.3 303 81.2
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 8.3e-137 490.7 304 80.6
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 2.7e-135 485.7 304 79.9
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 2.7e-135 485.7 306 79.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 3.5e-135 485.3 309 78.3
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.5e-135 485.3 303 80.2
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 4.5e-135 485.0 303 80.2
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.3e-134 483.4 313 78.0
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 5.0e-134 481.5 319 76.8
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 8.6e-134 480.7 320 76.6
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.5e-133 479.9 304 79.6
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 3.3e-133 478.8 310 77.1
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 1.2e-132 476.9 318 76.4
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 3.6e-132 475.3 317 75.7
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 8.0e-132 474.2 304 78.3
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 8.0e-132 474.2 303 80.5
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 8.0e-132 474.2 318 75.5
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.3e-131 472.6 304 77.6
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.3e-131 472.6 303 78.2
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 3.0e-131 472.2 303 78.2
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 3.0e-131 472.2 298 78.5
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 6.8e-131 471.1 305 77.0
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.8e-131 471.1 304 78.0
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 8.9e-131 470.7 302 77.8
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 1.2e-130 470.3 316 74.7
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.5e-130 469.9 303 76.6
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.0e-130 469.5 316 73.7
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.0e-130 469.5 306 76.8
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.4e-130 468.8 316 73.4
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 7.5e-130 467.6 299 78.3
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.3e-129 466.8 303 76.2
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 2.2e-129 466.1 306 76.1
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 2.2e-129 466.1 300 77.3
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.9e-129 465.7 311 75.9
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.7e-129 465.3 315 74.0
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 3.7e-129 465.3 298 77.9
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 4.9e-129 464.9 314 74.5
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.8e-128 463.0 316 72.8
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 3.2e-128 462.2 312 74.4
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 5.4e-128 461.5 308 76.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.2e-127 460.3 304 76.0
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.6e-127 459.9 306 76.8
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 1.6e-127 459.9 314 72.9
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.6e-127 459.9 304 76.0
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.0e-127 459.5 304 77.3
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 1.3e-126 456.8 303 74.6
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.7e-126 456.4 301 75.7
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.7e-126 456.4 305 75.4
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 2.3e-126 456.1 310 73.5
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 5.6e-125 451.4 304 77.6
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 7.3e-125 451.1 310 73.5
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.2e-124 450.3 358 67.6
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 4.7e-124 448.4 299 73.9
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.4e-123 446.8 278 79.9
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 3.1e-123 445.7 303 75.2
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.2e-122 443.7 295 78.0
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 3.4e-122 442.2 312 71.2
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 4.4e-122 441.8 312 71.2
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 9.8e-122 440.7 299 76.9
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.7e-121 439.9 296 73.6
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.7e-121 439.9 312 71.5
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.7e-121 439.9 312 71.5
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.7e-121 439.9 300 73.7
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.2e-121 439.5 295 75.6
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.9e-121 438.3 300 73.0
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 6.4e-121 438.0 300 73.3
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.9e-120 436.4 300 73.0
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 5.4e-120 434.9 305 72.1
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.7e-119 432.6 300 72.7
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 4.6e-119 431.8 298 73.8
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.3e-118 430.3 300 72.0
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 1.3e-118 430.3 300 72.7
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.6e-116 423.3 277 75.1
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 1.4e-112 410.2 298 72.5
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 2.7e-111 406.0 411 55.2
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.0e-110 404.1 309 65.7
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 6.6e-110 401.4 321 63.6
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 2.6e-106 389.4 304 66.1
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 5.8e-106 388.3 457 49.7
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.4e-104 381.7 288 66.0
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 3.0e-102 375.9 314 61.5
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 8.1e-100 367.9 403 51.4
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 6.0e-95 351.7 307 59.0
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 1.0e-94 350.9 229 76.9
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.7e-94 350.1 211 82.0
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.5e-90 337.0 316 57.6
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.1e-88 328.2 225 76.9
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.5e-82 310.5 316 51.9
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 2.4e-80 303.1 198 76.8
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.0e-79 298.5 204 76.0
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.0e-79 298.5 204 76.0
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 3.1e-75 286.2 167 85.0
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 7.6e-74 281.6 192 74.0
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 2.7e-71 273.1 166 82.5
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 7.9e-71 271.6 299 53.8
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.9e-69 266.9 184 73.4
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.9e-69 266.9 184 73.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.4e-67 260.8 167 79.0
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.1e-67 259.2 190 73.7
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.2e-65 253.4 258 48.4
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 6.7e-62 241.9 144 79.9
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.9e-59 231.9 147 76.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.9e-57 226.5 160 70.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 8.5e-57 224.9 191 62.3
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.4e-54 217.6 259 45.9
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.8e-52 209.9 141 73.0
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.7e-45 184.9 102 88.2
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 9.4e-32 141.7 107 62.6
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 4.7e-31 139.4 93 69.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 9.1e-27 125.2 238 34.0
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.5e-24 117.1 258 34.1
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.1e-23 114.0 80 71.2
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.0e-21 107.5 103 50.5
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 5.6e-16 89.4 48 83.3
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.0e-09 67.0 42 76.2


User provided reference genes

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