Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002060.1 Olea europaea HOM05D001336 ORTHO05D034236 5.1e-54 214.2 108 100.0
Oeu051273.1 Olea europaea HOM05D001336 ORTHO05D001211 1.0e-25 120.2 84 72.6
Dinv25873 Davidia involucrata HOM05D001336 ORTHO05D001211 2.5e-24 115.5 84 72.6
TWI34G1494 Tripterygium wilfordii HOM05D001336 ORTHO05D001211 7.9e-23 110.5 84 67.9
COL.COLO4_29848 Corchorus olitorius HOM05D001336 ORTHO05D001211 5.7e-21 104.4 84 63.1
Potri.002G067100 Populus trichocarpa HOM05D001336 ORTHO05D001211 7.4e-21 104.0 84 64.3
Potri.005G193100 Populus trichocarpa HOM05D001336 ORTHO05D001211 7.4e-21 104.0 84 64.3
Sabra05G0147600 Salix brachista HOM05D001336 ORTHO05D001211 1.7e-20 102.8 82 63.4
CiPaw.15G015400 Carya illinoinensis HOM05D001336 ORTHO05D001211 2.2e-20 102.4 84 64.3
Gohir.A05G244000 Gossypium hirsutum HOM05D001336 ORTHO05D001211 2.8e-20 102.1 87 62.1
Nitab4.5_0002497g0010 Nicotiana tabacum HOM05D001336 ORTHO05D001211 2.8e-20 102.1 84 60.7
Gohir.D05G245000 Gossypium hirsutum HOM05D001336 ORTHO05D001211 3.7e-20 101.7 84 63.1
Gorai.009G254800 Gossypium raimondii HOM05D001336 ORTHO05D001211 3.7e-20 101.7 84 63.1
Cpa.g.sc21.209 Carica papaya HOM05D001336 ORTHO05D001211 4.8e-20 101.3 84 61.9
GSVIVG01034544001 Vitis vinifera HOM05D001336 ORTHO05D001211 8.2e-20 100.5 84 63.1
CAN.G1215.2 Capsicum annuum HOM05D001336 ORTHO05D001211 1.1e-19 100.1 84 59.5
Ciclev10000559m.g Citrus clementina HOM05D001336 ORTHO05D001211 1.1e-19 100.1 85 60.0
FAN27G1886 Fragaria x ananassa HOM05D001336 ORTHO05D001211 1.4e-19 99.8 84 60.7
Lj7A375T59 Lonicera japonica HOM05D001336 ORTHO05D001211 1.4e-19 99.8 84 60.7
Cc10_g14450 Coffea canephora HOM05D001336 ORTHO05D001211 1.8e-19 99.4 84 63.1
FvH4_2g13560 Fragaria vesca HOM05D001336 ORTHO05D001211 1.8e-19 99.4 84 60.7
FAN24G0876 Fragaria x ananassa HOM05D001336 ORTHO05D001211 1.8e-19 99.4 84 60.7
Sabra02G0053200 Salix brachista HOM05D001336 ORTHO05D001211 1.8e-19 99.4 84 61.9
CSS0039304 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.4e-19 99.0 84 58.3
Migut.C00988 Erythranthe guttata HOM05D001336 ORTHO05D001211 2.4e-19 99.0 85 61.2
MD10G1026500 Malus domestica HOM05D001336 ORTHO05D001211 3.1e-19 98.6 84 60.7
Nitab4.5_0001062g0110 Nicotiana tabacum HOM05D001336 ORTHO05D001211 3.1e-19 98.6 84 60.7
CANSAT25G1624 Cannabis sativa HOM05D001336 ORTHO05D001211 5.3e-19 97.8 82 58.5
Actinidia04760 Actinidia chinensis HOM05D001336 ORTHO05D001211 9.1e-19 97.1 84 60.7
Migut.N03210 Erythranthe guttata HOM05D001336 ORTHO05D001211 9.1e-19 97.1 84 59.5
FAN15G2668 Fragaria x ananassa HOM05D001336 ORTHO05D001211 9.1e-19 97.1 84 60.7
Phvul.004G093900 Phaseolus vulgaris HOM05D001336 ORTHO05D001211 9.1e-19 97.1 84 58.3
Thecc.08G153900 Theobroma cacao HOM05D001336 ORTHO05D001211 9.1e-19 97.1 84 59.5
Lj2g0005253 Lotus japonicus HOM05D001336 ORTHO05D001211 1.2e-18 96.7 84 59.5
Prupe.8G032700 Prunus persica HOM05D001336 ORTHO05D001211 1.2e-18 96.7 84 58.3
RcHm_v2.0_Chr6g0275171 Rosa chinensis HOM05D001336 ORTHO05D001211 1.2e-18 96.7 82 59.8
VMungo0720G3164 Vigna mungo HOM05D001336 ORTHO05D001211 1.2e-18 96.7 82 61.0
Peaxi162Scf00599g00218 Petunia axillaris HOM05D001336 ORTHO05D001211 1.5e-18 96.3 84 57.1
Phvul.007G080800 Phaseolus vulgaris HOM05D001336 ORTHO05D001211 1.5e-18 96.3 82 61.0
Glyma.02G081000 Glycine max HOM05D001336 ORTHO05D001211 2.0e-18 95.9 84 58.3
Ah.05g167910 Amaranthus hybridus HOM05D001336 ORTHO05D001211 2.6e-18 95.5 81 58.0
TAR381G0385 Trochodendron aralioides HOM05D001336 ORTHO05D001211 3.4e-18 95.1 84 59.5
Nn5g28761 Nelumbo nucifera HOM05D001336 ORTHO05D001211 4.5e-18 94.7 84 57.1
AL1G51660 Arabidopsis lyrata HOM05D001336 ORTHO05D001211 1.3e-17 93.2 87 58.6
AT1G43620 Arabidopsis thaliana HOM05D001336 ORTHO05D001211 1.3e-17 93.2 87 58.6
Eucgr.F02699 Eucalyptus grandis HOM05D001336 ORTHO05D001211 1.7e-17 92.8 84 58.3
PGR042G0120 Punica granatum HOM05D001336 ORTHO05D001211 2.2e-17 92.4 82 57.3
PGSC0003DMG400024097 Solanum tuberosum HOM05D001336 ORTHO05D001211 2.2e-17 92.4 85 56.5
EL10Ac1g01557 Beta vulgaris HOM05D001336 ORTHO05D001211 2.9e-17 92.0 82 59.8
Lj5g0024627 Lotus japonicus HOM05D001336 ORTHO05D001211 2.9e-17 92.0 82 57.3
Solyc04g071540.4 Solanum lycopersicum HOM05D001336 ORTHO05D001211 5.0e-17 91.3 86 54.7
Sopen04g027520 Solanum pennellii HOM05D001336 ORTHO05D001211 5.0e-17 91.3 86 54.7
MSTRG.1090 Avicennia marina HOM05D001336 ORTHO05D001211 1.1e-16 90.1 84 57.1
Glyma.10G224000 Glycine max HOM05D001336 ORTHO05D001211 1.1e-16 90.1 82 57.3
THA.LOC104803035 Tarenaya hassleriana HOM05D001336 ORTHO05D001211 1.1e-16 90.1 88 56.8
Oeu046043.1 Olea europaea HOM05D001336 ORTHO05D001211 1.4e-16 89.7 84 57.1
arahy.Tifrunner.gnm1.ann1.7NV4RJ Arachis hypogaea HOM05D001336 ORTHO05D001211 2.5e-16 89.0 82 58.5
TPR.G22159 Trifolium pratense HOM05D001336 ORTHO05D001211 2.5e-16 89.0 82 54.9
arahy.Tifrunner.gnm1.ann1.X8HV17 Arachis hypogaea HOM05D001336 ORTHO05D001211 3.2e-16 88.6 90 54.4
Glyma.20G167900 Glycine max HOM05D001336 ORTHO05D001211 3.2e-16 88.6 85 57.6
AUR62026689 Chenopodium quinoa HOM05D001336 ORTHO05D001211 4.2e-16 88.2 84 56.0
Ca_10679_v3 Cicer arietinum L. HOM05D001336 ORTHO05D001211 4.2e-16 88.2 80 56.2
SalBow7G1553 Salvia bowleyana HOM05D001336 ORTHO05D001211 4.2e-16 88.2 86 55.8
SalBow7G2140 Salvia bowleyana HOM05D001336 ORTHO05D001211 4.2e-16 88.2 86 55.8
CARHR035650 Cardamine hirsuta HOM05D001336 ORTHO05D001211 5.5e-16 87.8 87 55.2
AUR62013593 Chenopodium quinoa HOM05D001336 ORTHO05D001211 5.5e-16 87.8 80 57.5
Thhalv10005442m.g Eutrema salsugineum HOM05D001336 ORTHO05D001211 5.5e-16 87.8 87 55.2
Lalb_Chr21g0305511 Lupinus albus HOM05D001336 ORTHO05D001211 7.2e-16 87.4 85 57.6
Manes.18G092800 Manihot esculenta HOM05D001336 ORTHO05D001211 1.2e-15 86.7 81 58.0
Carub.0001s3461 Capsella rubella HOM05D001336 ORTHO05D001211 1.6e-15 86.3 87 54.0
ECA246G4709 Erigeron canadensis HOM05D001336 ORTHO05D001211 1.6e-15 86.3 85 55.3
MD05G1027200 Malus domestica HOM05D001336 ORTHO05D001211 2.1e-15 85.9 80 58.8
Sp1g32510 Schrenkiella parvula HOM05D001336 ORTHO05D001211 3.6e-15 85.1 87 54.0
ATR0820G028 Amborella trichopoda HOM05D001336 ORTHO05D000153 6.1e-15 84.3 82 56.1
Aqoxy5G02066 Aquilegia oxysepala HOM05D001336 ORTHO05D001211 1.0e-14 83.6 82 54.9
DCAR_014435 Daucus carota HOM05D001336 ORTHO05D001211 1.4e-14 83.2 87 52.9
DCAR_014437 Daucus carota HOM05D001336 ORTHO05D001211 1.4e-14 83.2 87 52.9
Medtr1g098640 Medicago truncatula HOM05D001336 ORTHO05D001211 1.8e-14 82.8 85 54.1
MELO3C008339.2 Cucumis melo HOM05D001336 ORTHO05D001211 2.3e-14 82.4 82 52.4
Aa31LG6G9890 Aethionema arabicum HOM05D001336 ORTHO05D001211 3.9e-14 81.6 87 52.9
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 3.9e-14 81.6 83 56.6
arahy.Tifrunner.gnm1.ann1.GJL8UB Arachis hypogaea HOM05D001336 ORTHO05D001211 3.9e-14 81.6 83 56.6
Psat6g200840 Pisum sativum HOM05D001336 ORTHO05D001211 3.9e-14 81.6 80 55.0
Sed0022213 Sechium edule HOM05D001336 ORTHO05D001211 3.9e-14 81.6 85 54.1
ClCG08G007010 Citrullus lanatus HOM05D001336 ORTHO05D001211 5.2e-14 81.3 84 51.2
HPP92_001990 Vanilla planifolia HOM05D001336 ORTHO05D001211 5.2e-14 81.3 84 48.8
CsaV3_6G005200 Cucumis sativus L. HOM05D001336 ORTHO05D001211 1.5e-13 79.7 82 51.2
MBI09_g38855_MAGBIO Magnolia biondii HOM05D001336 ORTHO05D001211 1.5e-13 79.7 84 53.6
AUR62026696 Chenopodium quinoa HOM05D001336 ORTHO05D001211 3.3e-13 78.6 73 57.5
EL10Ac1g01563 Beta vulgaris HOM05D001336 ORTHO05D001211 4.4e-13 78.2 84 52.4
A10p07800 Brassica napus HOM05D001336 ORTHO05D001211 4.4e-13 78.2 87 52.9
BraSC36t46022Z Brassica rapa HOM05D001336 ORTHO05D001211 4.4e-13 78.2 87 52.9
Os01g0867600 Oryza sativa ssp. japonica HOM05D001336 ORTHO05D001211 7.4e-13 77.4 83 53.0
BcaB07g33980 Brassica carinata HOM05D001336 ORTHO05D001211 1.3e-12 76.6 87 50.6
BcaC08g42815 Brassica carinata HOM05D001336 ORTHO05D001211 1.3e-12 76.6 87 51.7
C06p00270 Brassica napus HOM05D001336 ORTHO05D001211 1.3e-12 76.6 87 51.7
Migut.N03211 Erythranthe guttata HOM05D001336 ORTHO05D001211 2.4e-11 72.4 75 50.7
SGA_v2.0_scaffold48G18005 Striga asiatica HOM05D001336 ORTHO05D001211 3.1e-11 72.0 85 48.2
AUR62013600 Chenopodium quinoa HOM05D001336 ORTHO05D001211 2.6e-10 68.9 57 64.9
AUR62028489 Chenopodium quinoa HOM05D001336 ORTHO05D001211 2.6e-10 68.9 57 64.9
Hund17440 Selenicereus undatus HOM05D001336 ORTHO05D001211 4.5e-10 68.2 70 57.1
CiPaw.16G011800 Carya illinoinensis HOM05D000092 ORTHO05D000042 7.7e-10 67.4 55 56.4
CiPaw.16G011300 Carya illinoinensis HOM05D001336 ORTHO05D034236 1.1e-08 63.5 45 60.0
HPP92_013764 Vanilla planifolia HOM05D001336 ORTHO05D001211 1.1e-08 63.5 84 42.9
Lsat_1_v5_gn_6_100521 Lactuca sativa HOM05D001336 ORTHO05D001211 3.2e-08 62.0 57 59.6
CiPaw.16G011700 Carya illinoinensis HOM05D001336 ORTHO05D034236 4.2e-08 61.6 50 58.0
Lsat_1_v5_gn_6_100401 Lactuca sativa HOM05D001336 ORTHO05D001211 4.0e-06 55.1 73 38.4
Nitab4.5_0000456g0010 Nicotiana tabacum HOM05D001336 ORTHO05D001211 5.2e-06 54.7 79 45.6
Nitab4.5_0009814g0030 Nicotiana tabacum HOM05D001336 ORTHO05D001211 5.2e-06 54.7 79 45.6
MBI10_g43788_MAGBIO Magnolia biondii HOM05D001336 ORTHO05D001211 8.8e-06 53.9 74 43.2
Solyc04g051150.3 Solanum lycopersicum HOM05D001336 ORTHO05D001211 8.8e-06 53.9 79 44.3
Sopen04g022440 Solanum pennellii HOM05D001336 ORTHO05D001211 8.8e-06 53.9 79 44.3


User provided reference genes

Program Settings