Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002046.1 Olea europaea HOM05D000272 ORTHO05D000164 5.2e-99 364.4 184 100.0
Oeu018649.1 Olea europaea HOM05D000272 ORTHO05D000164 1.3e-52 210.3 140 81.4
Oeu047117.2 Olea europaea HOM05D000272 ORTHO05D000164 1.6e-28 130.2 139 56.8
MSTRG.11664 Avicennia marina HOM05D000272 ORTHO05D000164 1.8e-19 100.1 142 47.2
Peaxi162Scf00136g00045 Petunia axillaris HOM05D000272 ORTHO05D000164 2.4e-19 99.8 145 40.7
Sopen08g019010 Solanum pennellii HOM05D000272 ORTHO05D000164 6.9e-19 98.2 142 42.3
PGSC0003DMG400029946 Solanum tuberosum HOM05D000272 ORTHO05D000164 9.1e-19 97.8 142 41.5
Solyc08g065420.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 7.7e-18 94.7 142 41.5
CSS0026906 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 2.2e-17 93.2 146 41.8
TAR383G0776 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.1e-16 90.9 146 40.4
GSVIVG01035361001 Vitis vinifera HOM05D000272 ORTHO05D000164 9.4e-16 87.8 141 39.7
Actinidia14708 Actinidia chinensis HOM05D000272 ORTHO05D000164 1.2e-15 87.4 142 38.7
Dinv23432 Davidia involucrata HOM05D000272 ORTHO05D000164 1.2e-15 87.4 138 42.0
Dinv27977 Davidia involucrata HOM05D000272 ORTHO05D000164 2.1e-15 86.7 142 39.4
Nitab4.5_0004160g0020 Nicotiana tabacum HOM05D000272 ORTHO05D000164 7.9e-15 84.7 139 38.1
CAN.G117.4 Capsicum annuum HOM05D000272 ORTHO05D000164 1.0e-14 84.3 140 38.6
CSS0006877 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 1.4e-14 84.0 142 41.5
TAR626G1020 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.4e-14 84.0 146 40.4
Thecc.09G052700 Theobroma cacao HOM05D000272 ORTHO05D000164 2.3e-14 83.2 142 40.1
Duzib187G0615 Durio zibethinus HOM05D000272 ORTHO05D000164 3.0e-14 82.8 142 39.4
Duzib150G1201 Durio zibethinus HOM05D000272 ORTHO05D000164 6.7e-14 81.6 142 39.4
QL02p001377 Quercus lobata HOM05D000272 ORTHO05D000164 6.7e-14 81.6 146 37.0
TAR624G0764 Trochodendron aralioides HOM05D000272 ORTHO05D000164 6.7e-14 81.6 105 44.8
Nitab4.5_0001584g0080 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.1e-13 80.9 139 37.4
Rhsim07G0142800 Rhododendron simsii HOM05D000272 ORTHO05D000164 2.0e-13 80.1 100 47.0
Actinidia01194 Actinidia chinensis HOM05D000272 ORTHO05D000164 7.4e-13 78.2 138 39.1
RcHm_v2.0_Chr6g0310681 Rosa chinensis HOM05D000272 ORTHO05D000164 9.7e-13 77.8 86 47.7
CiPaw.15G040000 Carya illinoinensis HOM05D000272 ORTHO05D000164 4.8e-12 75.5 142 38.7
FAN15G3216 Fragaria x ananassa HOM05D000272 ORTHO05D000164 6.3e-12 75.1 86 46.5
FAN27G1277 Fragaria x ananassa HOM05D000272 ORTHO05D000164 6.3e-12 75.1 86 46.5
Prupe.1G413700 Prunus persica HOM05D000272 ORTHO05D000164 6.3e-12 75.1 76 52.6
Cc08_g10440 Coffea canephora HOM05D000272 ORTHO05D000164 1.1e-11 74.3 129 40.3
FAN24G1584 Fragaria x ananassa HOM05D000577 ORTHO05D000164 1.4e-11 73.9 86 46.5
Gohir.D07G022500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.8e-11 73.6 132 38.6
Gorai.001G023100 Gossypium raimondii HOM05D000272 ORTHO05D000164 1.8e-11 73.6 132 38.6
FvH4_2g32060 Fragaria vesca HOM05D000272 ORTHO05D000164 2.4e-11 73.2 86 46.5
Hma1.2p1_0482F.1_g162600 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 3.1e-11 72.8 72 56.9
FAN20G0304 Fragaria x ananassa HOM05D000272 ORTHO05D000164 7.0e-11 71.6 86 45.3
Sabra18G0049400 Salix brachista HOM05D000272 ORTHO05D000164 9.1e-11 71.2 134 36.6
Ciclev10010212m.g Citrus clementina HOM05D000272 ORTHO05D000164 2.0e-10 70.1 141 36.9
Gohir.A07G022116 Gossypium hirsutum HOM05D000272 ORTHO05D000164 2.0e-10 70.1 132 37.1
COL.COLO4_21044 Corchorus olitorius HOM05D000272 ORTHO05D000164 3.5e-10 69.3 124 37.1
Manes.16G079300 Manihot esculenta HOM05D000272 ORTHO05D000164 1.7e-09 67.0 139 36.7
Duzib168G0983 Durio zibethinus HOM05D000272 ORTHO05D000164 2.2e-09 66.6 133 35.3
MBI04_g11712_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 2.2e-09 66.6 124 34.7
ECA246G4237 Erigeron canadensis HOM05D000272 ORTHO05D000164 3.8e-09 65.9 145 34.5
Actinidia30307 Actinidia chinensis HOM05D000272 ORTHO05D000164 5.0e-09 65.5 138 36.2
CiPaw.16G029100 Carya illinoinensis HOM05D000272 ORTHO05D000164 2.5e-08 63.2 139 33.8
Sabra06G0178900 Salix brachista HOM05D000272 ORTHO05D000164 2.5e-08 63.2 144 31.9
MD08G1043600 Malus domestica HOM05D000272 ORTHO05D000164 5.5e-08 62.0 73 45.2
MD15G1061000 Malus domestica HOM05D000272 ORTHO05D000164 9.4e-08 61.2 73 45.2
vmacro00150 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 1.2e-07 60.8 145 36.6
Medtr1g016490 Medicago truncatula HOM05D000272 ORTHO05D000164 2.1e-07 60.1 81 40.7
Psat6g019760 Pisum sativum HOM05D000272 ORTHO05D000164 2.1e-07 60.1 139 33.1
Ca_13174_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 4.7e-07 58.9 147 32.7
Lsat_1_v5_gn_3_24340 Lactuca sativa HOM05D000272 ORTHO05D000164 4.7e-07 58.9 149 31.5
TWI32G1306 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 4.7e-07 58.9 84 39.3
HanXRQChr17g0538451 Helianthus annuus HOM05D000272 ORTHO05D000164 6.1e-07 58.5 147 33.3
Aqoxy7G01252 Aquilegia oxysepala HOM05D001205 ORTHO05D001087 1.4e-06 57.4 143 32.2
DCAR_007725 Daucus carota HOM05D000272 ORTHO05D000164 1.8e-06 57.0 147 31.3
Nn6g35429 Nelumbo nucifera HOM05D000272 ORTHO05D000164 3.0e-06 56.2 150 32.0
PGR044G0114 Punica granatum HOM05D000272 ORTHO05D000164 3.0e-06 56.2 60 43.3
TWI34G1359 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 3.0e-06 56.2 140 31.4
PSO210G7454 Papaver somniferum HOM05D000272 ORTHO05D000164 5.2e-06 55.5 149 29.5
MSTRG.14049 Avicennia marina HOM05D000272 ORTHO05D000164 6.7e-06 55.1 138 36.2


User provided reference genes

Program Settings