Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 3.6e-42 174.5 88 100.0
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 1.8e-25 119.0 87 69.0
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 2.0e-24 115.5 85 65.9
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 1.3e-23 112.8 82 69.5
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 8.4e-23 110.2 83 67.5
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 1.1e-22 109.8 79 69.6
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 1.1e-22 109.8 83 68.7
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 2.7e-21 105.1 80 63.8
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 6.1e-21 104.0 83 66.3
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 1.0e-20 103.2 84 61.9
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 1.8e-20 102.4 84 61.9
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 2.3e-20 102.1 72 66.7
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 3.0e-20 101.7 70 72.9
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 3.0e-20 101.7 72 66.7
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 5.1e-20 100.9 75 68.0
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 6.7e-20 100.5 77 61.0
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 6.7e-20 100.5 81 58.0
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 6.7e-20 100.5 72 70.8
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 1.1e-19 99.8 77 63.6
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 1.1e-19 99.8 83 62.7
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 4.3e-19 97.8 76 60.5
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 4.3e-19 97.8 77 59.7
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 5.7e-19 97.4 86 64.0
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 5.7e-19 97.4 82 61.0
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 7.4e-19 97.1 84 58.3
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 7.4e-19 97.1 83 60.2
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 1.3e-18 96.3 71 63.4
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 1.6e-18 95.9 76 61.8
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 1.6e-18 95.9 87 59.8
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 2.8e-18 95.1 72 61.1
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 2.8e-18 95.1 74 62.2
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 3.7e-18 94.7 77 63.6
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 6.3e-18 94.0 72 59.7
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 1.8e-17 92.4 87 54.0
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 1.8e-17 92.4 71 59.2
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 2.4e-17 92.0 75 60.0
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 2.4e-17 92.0 77 61.0
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 3.1e-17 91.7 80 58.8
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 4.1e-17 91.3 74 58.1
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 4.1e-17 91.3 84 54.8
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 4.1e-17 91.3 77 59.7
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 5.3e-17 90.9 75 61.3
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 6.9e-17 90.5 76 57.9
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 9.0e-17 90.1 76 57.9
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 9.0e-17 90.1 77 62.3
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 9.0e-17 90.1 87 55.2
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 1.2e-16 89.7 88 56.8
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 1.5e-16 89.4 88 56.8
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 2.0e-16 89.0 69 60.9
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 2.0e-16 89.0 72 65.3
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 7.7e-16 87.0 73 61.6
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 7.7e-16 87.0 73 58.9
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 2.9e-15 85.1 65 67.7
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 2.9e-15 85.1 65 67.7
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 3.8e-15 84.7 78 55.1
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 8.5e-15 83.6 71 57.7
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 1.1e-14 83.2 68 60.3
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 1.1e-14 83.2 68 60.3
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.4e-14 82.8 74 60.8
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 1.9e-14 82.4 83 54.2
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 2.5e-14 82.0 159 37.1
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 7.2e-14 80.5 78 56.4
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 9.4e-14 80.1 75 56.0
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 2.1e-13 79.0 74 52.7
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 2.1e-13 79.0 84 57.1
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 2.7e-13 78.6 65 56.9
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 2.3e-12 75.5 65 55.4
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 1.3e-10 69.7 54 63.0
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 2.2e-10 68.9 50 66.0
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 6.9e-09 63.9 59 52.5
SEGI_19848 Sequoiadendron giganteum HOM05D008117 ORTHO05D010265 2.5e-06 55.5 62 46.8
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 4.2e-06 54.7 51 60.8


User provided reference genes

Program Settings