Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001799.2 Olea europaea HOM05D005154 ORTHO05D006270 1.3e-202 709.5 372 100.0
Oeu032406.1 Olea europaea HOM05D005154 ORTHO05D006270 7.5e-129 464.5 423 64.3
MSTRG.3768 Avicennia marina HOM05D005154 ORTHO05D006270 7.8e-78 295.0 371 50.7
SalBow3G4482 Salvia bowleyana HOM05D005154 ORTHO05D006270 2.4e-71 273.5 371 47.4
SalBow3G3886 Salvia bowleyana HOM05D005154 ORTHO05D006270 4.2e-71 272.7 371 47.4
MSTRG.2575 Avicennia marina HOM05D005154 ORTHO05D006270 2.1e-70 270.4 373 47.2
SalBow5G0552 Salvia bowleyana HOM05D005154 ORTHO05D006270 2.1e-67 260.4 372 47.0
Migut.H02344 Erythranthe guttata HOM05D005154 ORTHO05D006270 3.8e-64 249.6 374 46.5
SGA_v2.0_scaffold111G31501 Striga asiatica HOM05D005154 ORTHO05D006270 2.3e-61 240.4 377 45.1
Dinv13215 Davidia involucrata HOM05D005154 ORTHO05D006270 4.3e-60 236.1 390 45.6
PGSC0003DMG400016159 Solanum tuberosum HOM05D005154 ORTHO05D006270 2.1e-59 233.8 321 48.3
Sopen11g004840 Solanum pennellii HOM05D005154 ORTHO05D006270 1.8e-58 230.7 321 47.4
CSS0008069 Camellia sinensis var. sinensis HOM05D005154 ORTHO05D006270 5.3e-58 229.2 387 44.2
Cc07_g14830 Coffea canephora HOM05D005154 ORTHO05D006270 5.3e-58 229.2 302 49.3
Migut.L00147 Erythranthe guttata HOM05D005154 ORTHO05D006270 6.9e-58 228.8 361 47.1
Solyc11g009070.2 Solanum lycopersicum HOM05D005154 ORTHO05D006270 6.9e-58 228.8 388 44.1
Nitab4.5_0004570g0010 Nicotiana tabacum HOM05D005154 ORTHO05D006270 9.0e-58 228.4 293 50.5
CAN.G905.36 Capsicum annuum HOM05D005154 ORTHO05D006270 5.8e-57 225.7 384 42.4
Actinidia28853 Actinidia chinensis HOM05D005154 ORTHO05D006270 1.7e-56 224.2 384 42.4
SGA_v2.0_scaffold335G49113 Striga asiatica HOM05D005154 ORTHO05D006270 4.2e-55 219.5 356 44.9
Peaxi162Scf00381g00914 Petunia axillaris HOM05D005154 ORTHO05D006270 1.0e-53 214.9 378 42.9
Cfa002623 Carpinus fangiana HOM05D005154 ORTHO05D006270 1.3e-53 214.5 361 42.4
vmacro18586 Vaccinium macrocarpon HOM05D005154 ORTHO05D006270 5.1e-53 212.6 385 42.6
HanXRQChr14g0445521 Helianthus annuus HOM05D005154 ORTHO05D006270 6.7e-53 212.2 271 48.7
Lsat_1_v5_gn_2_66460 Lactuca sativa HOM05D005154 ORTHO05D006270 8.7e-53 211.8 362 43.1
Hma1.2p1_0019F.1_g013610 Hydrangea macrophylla HOM05D005154 ORTHO05D006270 1.9e-52 210.7 378 42.1
Rhsim08G0012700 Rhododendron simsii HOM05D005154 ORTHO05D006270 1.9e-52 210.7 369 40.7
Ciclev10026087m.g Citrus clementina HOM05D005154 ORTHO05D006270 2.8e-51 206.8 382 40.3
Thecc.01G097800 Theobroma cacao HOM05D005154 ORTHO05D006270 3.7e-51 206.5 374 40.6
Haze_24881 Corylus avellana HOM05D005154 ORTHO05D006270 3.1e-50 203.4 364 41.5
Haze_24872 Corylus avellana HOM05D005154 ORTHO05D006270 4.0e-50 203.0 364 41.5
Manes.12G131800 Manihot esculenta HOM05D005154 ORTHO05D006270 1.2e-49 201.4 366 42.6
COL.COLO4_27276 Corchorus olitorius HOM05D005154 ORTHO05D006270 2.0e-49 200.7 376 41.2
Actinidia20002 Actinidia chinensis HOM05D005154 ORTHO05D006270 1.3e-48 198.0 327 44.0
CiPaw.03G144000 Carya illinoinensis HOM05D005154 ORTHO05D006270 2.9e-48 196.8 370 39.7
Nn5g28615 Nelumbo nucifera HOM05D005154 ORTHO05D006270 8.4e-48 195.3 293 45.4
Potri.007G095600 Populus trichocarpa HOM05D005154 ORTHO05D006270 2.5e-47 193.7 323 41.8
TAR633G1456 Trochodendron aralioides HOM05D005154 ORTHO05D006270 2.5e-47 193.7 344 44.2
Eucgr.I00513 Eucalyptus grandis HOM05D005154 ORTHO05D006270 3.2e-47 193.4 290 45.2
Lj4g0010322 Lotus japonicus HOM05D005154 ORTHO05D006270 3.2e-47 193.4 342 39.5
MD00G1037300 Malus domestica HOM05D005154 ORTHO05D006270 1.6e-46 191.0 374 40.1
Glyma.05G176600 Glycine max HOM05D005154 ORTHO05D006270 2.1e-46 190.7 269 47.2
QL06p048470 Quercus lobata HOM05D005154 ORTHO05D006270 4.6e-46 189.5 374 39.6
Duzib147G1408 Durio zibethinus HOM05D005154 ORTHO05D006270 7.9e-46 188.7 360 40.8
Atru.chr3.1372 Acer truncatum HOM05D005154 ORTHO05D006270 2.3e-45 187.2 378 39.2
TAR362G0353 Trochodendron aralioides HOM05D005154 ORTHO05D006270 1.1e-44 184.9 276 45.3
Prupe.6G191100 Prunus persica HOM05D005154 ORTHO05D006270 1.5e-44 184.5 265 49.1
Sabra05G0060000 Salix brachista HOM05D005154 ORTHO05D006270 5.7e-44 182.6 368 37.0
Sabra07G0078700 Salix brachista HOM05D005154 ORTHO05D006270 5.7e-44 182.6 369 38.5
TWI77G0548 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 5.7e-44 182.6 361 38.8
PSO447G0271 Papaver somniferum HOM05D005154 ORTHO05D006270 7.4e-44 182.2 367 39.5
Gorai.003G040700 Gossypium raimondii HOM05D005154 ORTHO05D006270 9.7e-44 181.8 373 37.8
Nn1g06223 Nelumbo nucifera HOM05D005154 ORTHO05D006270 1.6e-43 181.0 269 44.2
Potri.005G073500 Populus trichocarpa HOM05D005154 ORTHO05D006270 2.2e-43 180.6 368 37.0
TWI53G2081 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 3.7e-43 179.9 363 37.7
PGR004G1180 Punica granatum HOM05D005154 ORTHO05D006270 6.3e-43 179.1 255 45.9
VMungo0251G0355 Vigna mungo HOM05D005154 ORTHO05D006270 8.2e-43 178.7 279 42.7
Hund13599 Selenicereus undatus HOM05D005154 ORTHO05D006270 1.4e-42 177.9 288 41.7
RcHm_v2.0_Chr2g0112751 Rosa chinensis HOM05D005154 ORTHO05D006270 2.4e-42 177.2 349 39.8
PSO210G3532 Papaver somniferum HOM05D005154 ORTHO05D006270 3.1e-42 176.8 356 39.6
Gohir.A02G128100 Gossypium hirsutum HOM05D005154 ORTHO05D006270 4.1e-42 176.4 372 37.1
Ca_17754_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 6.9e-42 175.6 269 44.2
arahy.Tifrunner.gnm1.ann1.LGH16T Arachis hypogaea HOM05D005154 ORTHO05D006270 9.0e-42 175.3 337 38.3
Glyma.08G134000 Glycine max HOM05D005154 ORTHO05D006270 9.0e-42 175.3 167 61.1
unitig_899.g14551 Utricularia gibba HOM05D005154 ORTHO05D006270 9.0e-42 175.3 373 38.3
arahy.Tifrunner.gnm1.ann1.0B7H6P Arachis hypogaea HOM05D005154 ORTHO05D006270 2.0e-41 174.1 355 37.5
TPR.G6195 Trifolium pratense HOM05D005154 ORTHO05D006270 3.4e-41 173.3 264 43.9
Duzib187G0267 Durio zibethinus HOM05D005154 ORTHO05D006270 5.9e-41 172.6 368 38.3
FAN19G2087 Fragaria x ananassa HOM05D005154 ORTHO05D006270 1.3e-40 171.4 283 43.5
FAN28G0994 Fragaria x ananassa HOM05D005154 ORTHO05D006270 1.3e-40 171.4 343 39.4
Medtr8g089995 Medicago truncatula HOM05D005154 ORTHO05D006270 1.3e-40 171.4 264 42.8
FAN23G2516 Fragaria x ananassa HOM05D005154 ORTHO05D006270 2.2e-40 170.6 283 43.1
FvH4_1g20490 Fragaria vesca HOM05D005154 ORTHO05D006270 5.0e-40 169.5 283 43.1
CsaV3_6G045320 Cucumis sativus L. HOM05D005154 ORTHO05D006270 6.5e-40 169.1 366 37.4
MELO3C007745.2 Cucumis melo HOM05D005154 ORTHO05D006270 4.2e-39 166.4 370 37.3
EL10Ac6g15137 Beta vulgaris HOM05D005154 ORTHO05D006270 7.2e-39 165.6 381 37.5
MBI02_g02178_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 2.7e-38 163.7 250 44.0
THA.LOC104807680 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 6.1e-38 162.5 250 44.0
Phvul.002G257700 Phaseolus vulgaris HOM05D005154 ORTHO05D006270 1.0e-37 161.8 256 42.6
AUR62001985 Chenopodium quinoa HOM05D005154 ORTHO05D006270 1.3e-37 161.4 256 42.6
Ca_16517_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 1.3e-37 161.4 282 40.8
Sc03g0000070 Simmondsia chinensis HOM05D005154 ORTHO05D006270 1.3e-37 161.4 293 39.2
Lalb_Chr07g0185271 Lupinus albus HOM05D005154 ORTHO05D006270 3.0e-37 160.2 268 42.5
Gohir.D03G039500 Gossypium hirsutum HOM05D005154 ORTHO05D006270 8.7e-37 158.7 241 44.0
THA.LOC104798878 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 4.3e-36 156.4 231 42.9
Carub.0008s2612 Capsella rubella HOM05D005154 ORTHO05D006270 9.7e-36 155.2 268 42.2
Cpa.g.sc55.88 Carica papaya HOM05D005154 ORTHO05D006270 9.7e-36 155.2 198 51.5
MELO3C017601.2 Cucumis melo HOM05D005154 ORTHO05D006270 2.2e-35 154.1 353 35.7
Sp2g28350 Schrenkiella parvula HOM05D005154 ORTHO05D006270 2.8e-35 153.7 182 51.1
BolC2t12462H Brassica oleracea HOM05D005154 ORTHO05D006270 3.7e-35 153.3 272 39.7
Aqoxy6G00745 Aquilegia oxysepala HOM05D005154 ORTHO05D006270 4.8e-35 152.9 379 34.6
Sed0021389 Sechium edule HOM05D005154 ORTHO05D006270 4.8e-35 152.9 337 38.6
A02p43800 Brassica napus HOM05D005154 ORTHO05D006270 8.2e-35 152.1 272 40.4
BraA02t09304Z Brassica rapa HOM05D005154 ORTHO05D006270 8.2e-35 152.1 272 40.4
ECA238G2162 Erigeron canadensis HOM05D005154 ORTHO05D001925 8.2e-35 152.1 217 46.1
Thhalv10004756m.g Eutrema salsugineum HOM05D005154 ORTHO05D006270 8.2e-35 152.1 276 40.6
AL8G42810 Arabidopsis lyrata HOM05D005154 ORTHO05D006270 1.8e-34 151.0 277 40.1
Sed0002157 Sechium edule HOM05D005154 ORTHO05D006270 1.8e-34 151.0 286 38.5
CARHR279200 Cardamine hirsuta HOM05D005154 ORTHO05D006270 3.1e-34 150.2 166 54.8
ClCG07G017400 Citrullus lanatus HOM05D005154 ORTHO05D006270 3.1e-34 150.2 354 35.3
Lj2C542T5 Lonicera japonica HOM05D005154 ORTHO05D006270 3.1e-34 150.2 214 44.9
Aa31LG1G16710 Aethionema arabicum HOM05D005154 ORTHO05D006270 4.1e-34 149.8 255 42.7
A06p32100 Brassica napus HOM05D005154 ORTHO05D006270 5.3e-34 149.4 254 41.3
BolC3t18339H Brassica oleracea HOM05D002046 ORTHO05D002180 5.3e-34 149.4 257 41.2
BraA06t26139Z Brassica rapa HOM05D005154 ORTHO05D006270 5.3e-34 149.4 254 41.3
BcaC01g02761 Brassica carinata HOM05D005154 ORTHO05D006270 1.2e-33 148.3 257 40.9
Medtr3g086990 Medicago truncatula HOM05D005154 ORTHO05D006270 2.0e-33 147.5 328 36.9
C03p60830 Brassica napus HOM05D005154 ORTHO05D006270 2.6e-33 147.1 257 41.2
CDE05G0874 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 1.3e-32 144.8 275 41.1
ATR1133G017 Amborella trichopoda HOM05D005154 ORTHO05D006270 5.0e-32 142.9 214 45.3
C02p63960 Brassica napus HOM05D005154 ORTHO05D006270 2.5e-31 140.6 202 46.0
Lj4A897G79 Lonicera japonica HOM05D005154 ORTHO05D006270 3.2e-31 140.2 210 45.7
AT5G65250 Arabidopsis thaliana HOM05D005154 ORTHO05D006270 2.7e-30 137.1 179 48.6
Psat5g090640 Pisum sativum HOM05D005154 ORTHO05D006270 4.7e-30 136.3 271 38.4
CiPaw.04G102700 Carya illinoinensis HOM05D005154 ORTHO05D006270 3.9e-29 133.3 262 42.7
unitig_748.g8652 Utricularia gibba HOM05D005154 ORTHO05D006270 2.0e-28 131.0 191 45.5
MBI02_g27971_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 5.7e-28 129.4 248 42.7
SEGI_40329 Sequoiadendron giganteum HOM05D005154 ORTHO05D006270 5.7e-28 129.4 184 44.6
ClCG01G018660 Citrullus lanatus HOM05D005154 ORTHO05D006270 7.4e-28 129.0 445 30.8
Sed0027637 Sechium edule HOM05D005154 ORTHO05D006270 9.7e-28 128.6 345 33.0
HPP92_016780 Vanilla planifolia HOM05D005154 ORTHO05D006270 1.3e-27 128.3 107 64.5
GSVIVG01006633001 Vitis vinifera HOM05D005154 ORTHO05D006270 4.1e-26 123.2 194 43.8
AUR62003820 Chenopodium quinoa HOM05D005154 ORTHO05D006270 4.5e-25 119.8 205 41.0
Os08g0484800 Oryza sativa ssp. japonica HOM05D005154 ORTHO05D006270 4.5e-25 119.8 214 39.3
DCAR_014210 Daucus carota HOM05D005154 ORTHO05D006270 2.9e-24 117.1 213 38.0
Psat7g056800 Pisum sativum HOM05D005154 ORTHO05D006270 2.5e-23 114.0 206 40.8
BcaNung07054 Brassica carinata HOM05D005154 ORTHO05D006270 3.2e-23 113.6 86 70.9
CsaV3_UNG158170 Cucumis sativus L. HOM05D001364 ORTHO05D006270 3.2e-23 113.6 233 38.2
BcaB07g34227 Brassica carinata HOM05D005154 ORTHO05D006270 4.2e-23 113.2 166 45.8
PGR102G1872 Punica granatum HOM05D005154 ORTHO05D006270 8.0e-22 109.0 178 44.9
CDE05G3641 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 3.3e-20 103.6 131 49.6
MD01G1033600 Malus domestica HOM05D005154 ORTHO05D006270 4.1e-18 96.7 131 53.4
CsaV3_4G004630 Cucumis sativus L. HOM05D005154 ORTHO05D006270 1.3e-16 91.7 163 40.5
Actinidia28244 Actinidia chinensis HOM05D005154 ORTHO05D006270 5.2e-13 79.7 110 51.8
CBR_g50776 Chara braunii HOM05D002289 ORTHO05D004369 7.5e-12 75.9 87 48.3
Mapoly0112s0020 Marchantia polymorpha HOM05D005154 ORTHO05D006270 7.5e-12 75.9 128 37.5
CDE03G0147 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 9.7e-12 75.5 161 34.2
Nitab4.5_0000743g0090 Nicotiana tabacum HOM05D005154 ORTHO05D006270 1.7e-11 74.7 55 69.1
Pp3c10_24690 Physcomitrium patens HOM05D005154 ORTHO05D006270 2.8e-11 73.9 131 37.4
CsaV3_UNG129000 Cucumis sativus L. HOM05D005154 ORTHO05D006270 4.8e-11 73.2 146 37.7
CsaV3_UNG223540 Cucumis sativus L. HOM05D005154 ORTHO05D006270 1.8e-10 71.2 151 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1569 Anthoceros agrestis HOM05D005154 ORTHO05D006270 2.7e-09 67.4 127 36.2
SMO171G0129 Selaginella moellendorffii HOM05D005154 ORTHO05D006270 2.2e-08 64.3 124 35.5
Lj2C542T6 Lonicera japonica HOM05D005154 ORTHO05D006270 6.5e-08 62.8 154 37.0
CiPaw.11G071200 Carya illinoinensis HOM05D005154 ORTHO05D006270 1.2e-06 58.5 119 39.5


User provided reference genes

Program Settings