Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 0.0e+00 1665.2 856 100.0
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.9e-308 1062.4 805 69.3
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 2.4e-308 1062.0 805 69.2
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 3.0e-306 1055.0 800 70.6
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 3.4e-302 1041.6 804 68.0
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 4.4e-302 1041.2 806 67.5
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 3.2e-300 1035.0 805 67.6
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 3.2e-300 1035.0 802 66.7
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 4.6e-299 1031.2 803 67.2
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 5.1e-298 1027.7 803 67.6
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 1.1e-297 1026.5 803 66.9
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 3.3e-297 1025.0 835 64.6
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 4.3e-297 1024.6 803 67.1
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 1.4e-295 1019.6 799 68.2
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 3.4e-294 1015.0 808 67.2
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 3.8e-293 1011.5 804 65.5
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 1.9e-292 1009.2 810 65.9
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 1.3e-290 1003.0 802 65.3
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 1.1e-289 1000.0 804 64.7
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 4.8e-288 994.6 804 65.5
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 5.3e-287 991.1 802 64.6
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 2.0e-286 989.2 762 67.5
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 2.6e-286 988.8 805 64.7
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 3.0e-282 975.3 802 65.5
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 8.1e-280 967.2 808 64.2
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 5.3e-279 964.5 806 63.0
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 2.6e-278 962.2 812 62.7
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 2.9e-277 958.7 809 63.3
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 3.8e-277 958.4 803 63.3
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 3.8e-277 958.4 803 63.3
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.9e-276 956.1 802 62.7
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 3.2e-276 955.3 808 63.4
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 3.2e-276 955.3 818 63.1
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 4.2e-276 954.9 803 65.3
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 7.1e-276 954.1 801 62.9
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 7.1e-276 954.1 801 62.8
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 9.3e-276 953.7 805 63.6
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 1.6e-275 953.0 803 65.3
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 2.1e-275 952.6 805 63.6
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 6.0e-275 951.0 802 64.3
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 6.0e-275 951.0 806 62.3
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 7.9e-275 950.7 803 62.8
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 5.1e-274 948.0 803 63.1
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 3.3e-273 945.3 802 64.0
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 5.7e-273 944.5 804 64.1
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 6.3e-272 941.0 802 63.1
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 1.1e-271 940.3 802 62.8
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 3.1e-271 938.7 763 64.1
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 4.1e-271 938.3 805 63.1
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 9.0e-271 937.2 806 62.0
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 5.9e-270 934.5 806 61.7
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 1.7e-269 932.9 805 61.9
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 1.9e-268 929.5 802 61.6
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 2.5e-268 929.1 802 61.2
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.3e-266 922.5 808 62.7
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 8.7e-266 920.6 812 61.0
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 2.0e-262 909.4 807 60.2
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 2.2e-261 906.0 811 60.3
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 1.9e-260 902.9 808 59.9
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 2.7e-259 899.0 806 60.7
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 3.6e-259 898.7 839 59.5
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 5.1e-258 894.8 799 61.3
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 2.0e-257 892.9 751 62.8
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 2.8e-256 889.0 803 59.8
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 3.7e-256 888.6 812 60.1
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 2.4e-255 885.9 799 60.2
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 6.9e-255 884.4 808 59.0
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 9.1e-255 884.0 807 59.1
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 3.8e-253 878.6 835 57.2
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 3.2e-252 875.5 807 58.5
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 7.2e-252 874.4 806 58.7
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 9.4e-252 874.0 809 59.2
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 1.2e-251 873.6 805 58.1
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 2.1e-251 872.8 808 58.4
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 2.1e-251 872.8 802 59.4
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 3.0e-250 869.0 822 58.0
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 3.9e-250 868.6 806 57.9
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 1.1e-249 867.1 803 58.9
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 2.0e-249 866.3 751 63.1
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 5.7e-249 864.8 849 55.5
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 9.7e-249 864.0 813 58.1
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 3.1e-247 859.0 807 58.5
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 5.3e-247 858.2 798 58.0
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 7.7e-246 854.4 808 57.7
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.0e-245 854.0 754 60.9
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 1.8e-242 843.2 808 57.7
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 3.8e-237 825.5 802 56.7
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 2.1e-235 819.7 802 56.6
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 8.0e-235 817.8 779 58.2
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 9.8e-233 810.8 769 57.1
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 1.7e-224 783.5 808 53.6
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 4.0e-218 762.3 696 61.4
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 4.4e-217 758.8 649 63.2
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 3.3e-212 742.7 804 51.1
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 5.2e-210 735.3 817 51.2
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 3.3e-204 716.1 763 54.5
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 1.6e-195 687.2 797 49.9
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 1.2e-190 671.0 758 49.5
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 3.4e-169 599.7 440 69.8
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 3.8e-160 569.7 525 59.6
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 6.7e-157 558.9 744 46.5
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 8.0e-118 429.1 794 36.9
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 2.6e-116 424.1 797 35.8
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 6.3e-115 419.5 776 35.8
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 2.1e-94 351.3 310 61.3
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 1.3e-83 315.5 933 29.8
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 1.3e-46 192.6 189 60.8
TAR629G0105 Trochodendron aralioides HOM05D006510 ORTHO05D008171 4.7e-25 120.9 79 73.4
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 2.8e-14 85.1 57 70.2
Solyc01g011180.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.0e-12 79.0 51 72.5
BcaB01g03423 Brassica carinata HOM05D001990 ORTHO05D002033 5.9e-12 77.4 102 48.0
Solyc01g011190.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 1.0e-11 76.6 51 66.7
BraA03t11594Z Brassica rapa HOM05D006510 ORTHO05D008171 2.8e-06 58.5 95 41.1


User provided reference genes

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