Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001717.1 Olea europaea HOM05D002434 ORTHO05D049469 2.7e-74 282.0 145 100.0
Oeu001718.2 Olea europaea HOM05D002434 ORTHO05D002743 4.6e-58 228.0 125 94.4
MSTRG.13355 Avicennia marina HOM05D002434 ORTHO05D002743 3.2e-19 99.0 124 47.6
Cc11_g15570 Coffea canephora HOM05D002434 ORTHO05D002743 7.1e-19 97.8 122 45.9
Oeu049179.1 Olea europaea HOM05D002434 ORTHO05D002743 4.6e-18 95.1 123 48.0
SalBow8G0068 Salvia bowleyana HOM05D002434 ORTHO05D002743 3.0e-17 92.4 122 47.5
DCAR_024444 Daucus carota HOM05D002434 ORTHO05D002743 6.7e-17 91.3 126 48.4
Nitab4.5_0006332g0010 Nicotiana tabacum HOM05D002434 ORTHO05D002743 2.5e-16 89.4 126 45.2
Migut.E00195 Erythranthe guttata HOM05D002434 ORTHO05D002743 4.3e-16 88.6 124 48.4
Solyc04g039620.2 Solanum lycopersicum HOM05D002434 ORTHO05D002743 4.3e-16 88.6 120 50.0
Sopen04g015790 Solanum pennellii HOM05D002434 ORTHO05D002743 4.3e-16 88.6 120 50.0
Nitab4.5_0000370g0050 Nicotiana tabacum HOM05D002434 ORTHO05D002743 9.7e-16 87.4 125 45.6
CSS0042281 Camellia sinensis var. sinensis HOM05D002434 ORTHO05D002743 2.8e-15 85.9 85 54.1
SGA_v2.0_scaffold87G27083 Striga asiatica HOM05D002434 ORTHO05D002743 3.7e-15 85.5 83 54.2
CAN.G7.21 Capsicum annuum HOM05D002434 ORTHO05D002743 6.3e-15 84.7 120 42.5
vmacro01129 Vaccinium macrocarpon HOM05D002434 ORTHO05D002743 2.4e-14 82.8 85 49.4
Rhsim12G0041100 Rhododendron simsii HOM05D002434 ORTHO05D002743 6.9e-14 81.3 122 38.5
Peaxi162Scf00342g00011 Petunia axillaris HOM05D002434 ORTHO05D002743 1.2e-13 80.5 85 56.5
Lj3A1057G78 Lonicera japonica HOM05D002434 ORTHO05D002743 2.0e-13 79.7 135 41.5
Thecc.02G257500 Theobroma cacao HOM05D002434 ORTHO05D002743 5.9e-13 78.2 83 47.0
Duzib268G0415 Durio zibethinus HOM05D002434 ORTHO05D002743 1.0e-12 77.4 83 44.6
TAR622G0635 Trochodendron aralioides HOM05D002434 ORTHO05D002743 1.7e-12 76.6 126 38.1
MBI10_g00735_MAGBIO Magnolia biondii HOM05D002434 ORTHO05D002743 2.2e-12 76.3 112 44.6
Actinidia08141 Actinidia chinensis HOM05D002434 ORTHO05D002743 2.9e-12 75.9 85 49.4
Lsat_1_v5_gn_8_150721 Lactuca sativa HOM05D002434 ORTHO05D002743 2.9e-12 75.9 93 46.2
CANSAT01G0888 Cannabis sativa HOM05D002434 ORTHO05D002743 1.4e-11 73.6 135 40.7
Duzib251G0820 Durio zibethinus HOM05D002434 ORTHO05D002743 1.4e-11 73.6 83 45.8
Cpa.g.sc33.6 Carica papaya HOM05D002434 ORTHO05D002743 1.9e-11 73.2 89 47.2
CDE06G1974 Ceratophyllum demersum HOM05D002434 ORTHO05D002743 2.5e-11 72.8 84 47.6
TWI18G1153 Tripterygium wilfordii HOM05D002434 ORTHO05D002743 2.5e-11 72.8 121 38.8
MD16G1099000 Malus domestica HOM05D002434 ORTHO05D002743 4.2e-11 72.0 117 41.0
Ah.03g133140 Amaranthus hybridus HOM05D002434 ORTHO05D002743 5.5e-11 71.6 120 41.7
PSO478G4409 Papaver somniferum HOM05D002434 ORTHO05D002743 5.5e-11 71.6 111 43.2
Prupe.1G247200 Prunus persica HOM05D002434 ORTHO05D002743 5.5e-11 71.6 115 37.4
Hund25383 Selenicereus undatus HOM05D002434 ORTHO05D002743 9.4e-11 70.9 116 41.4
Nn3g16748 Nelumbo nucifera HOM05D002434 ORTHO05D002743 1.2e-10 70.5 132 39.4
AUR62005447 Chenopodium quinoa HOM05D002434 ORTHO05D002743 1.6e-10 70.1 119 37.0
Sc14g0008700 Simmondsia chinensis HOM05D002434 ORTHO05D002743 1.6e-10 70.1 127 39.4
THA.LOC104809581 Tarenaya hassleriana HOM05D002434 ORTHO05D002743 2.1e-10 69.7 119 37.0
PGR119G2379 Punica granatum HOM05D002434 ORTHO05D002743 2.7e-10 69.3 133 36.1
Gorai.012G172700 Gossypium raimondii HOM05D002434 ORTHO05D002743 3.6e-10 68.9 82 43.9
CiPaw.06G068700 Carya illinoinensis HOM05D002434 ORTHO05D002743 6.1e-10 68.2 129 37.2
HanXRQChr08g0208081 Helianthus annuus HOM05D002434 ORTHO05D002743 6.1e-10 68.2 62 54.8
C05p09090 Brassica napus HOM05D002434 ORTHO05D002743 7.9e-10 67.8 118 39.0
Gohir.A04G136500 Gossypium hirsutum HOM05D002434 ORTHO05D002743 7.9e-10 67.8 84 41.7
QL03p058514 Quercus lobata HOM05D002434 ORTHO05D002743 1.4e-09 67.0 86 47.7
AT1G10700 Arabidopsis thaliana HOM05D002434 ORTHO05D002743 1.8e-09 66.6 118 39.8
Haze_12191 Corylus avellana HOM05D002434 ORTHO05D002743 1.8e-09 66.6 95 45.3
ECA233G0836 Erigeron canadensis HOM05D002434 ORTHO05D002743 1.8e-09 66.6 131 37.4
Aqoxy3G01162 Aquilegia oxysepala HOM05D002434 ORTHO05D002743 3.0e-09 65.9 106 38.7
Gohir.D04G179600 Gossypium hirsutum HOM05D002434 ORTHO05D002743 3.0e-09 65.9 81 43.2
TPR.G38744 Trifolium pratense HOM05D002434 ORTHO05D002743 3.0e-09 65.9 123 38.2
Carub.0001s1019 Capsella rubella HOM05D002434 ORTHO05D002743 3.9e-09 65.5 119 37.8
CARHR010880 Cardamine hirsuta HOM05D002434 ORTHO05D002743 3.9e-09 65.5 132 37.9
Cfa009200 Carpinus fangiana HOM05D002434 ORTHO05D002743 3.9e-09 65.5 89 44.9
COL.COLO4_24247 Corchorus olitorius HOM05D002434 ORTHO05D002743 3.9e-09 65.5 53 58.5
Ciclev10031735m.g Citrus clementina HOM05D002434 ORTHO05D002743 5.1e-09 65.1 86 41.9
Glyma.02G038000 Glycine max HOM05D002434 ORTHO05D002743 5.1e-09 65.1 128 35.9
CSS0046708 Camellia sinensis var. sinensis HOM05D002434 ORTHO05D002743 8.8e-09 64.3 43 62.8
Thhalv10007773m.g Eutrema salsugineum HOM05D002434 ORTHO05D002743 8.8e-09 64.3 131 35.9
Lalb_Chr16g0381991 Lupinus albus HOM05D002434 ORTHO05D002743 8.8e-09 64.3 132 34.1
FvH4_4g25920 Fragaria vesca HOM05D002434 ORTHO05D002743 1.1e-08 63.9 76 38.2
FAN12G1207 Fragaria x ananassa HOM05D002434 ORTHO05D002743 1.1e-08 63.9 76 38.2
FAN12G4011 Fragaria x ananassa HOM05D002434 ORTHO05D002743 1.1e-08 63.9 76 38.2
BolC5t29652H Brassica oleracea HOM05D002434 ORTHO05D002743 1.5e-08 63.5 126 34.9
Lalb_Chr09g0326181 Lupinus albus HOM05D002434 ORTHO05D002743 1.5e-08 63.5 133 35.3
FAN22G0243 Fragaria x ananassa HOM05D002434 ORTHO05D002743 2.0e-08 63.2 76 38.2
Sp1g09400 Schrenkiella parvula HOM05D002434 ORTHO05D002743 2.0e-08 63.2 132 36.4
GSVIVG01004085001 Vitis vinifera HOM05D002434 ORTHO05D002743 2.0e-08 63.2 124 39.5
BcaC05g24957 Brassica carinata HOM05D002434 ORTHO05D002743 2.5e-08 62.8 129 34.9
A06p07520 Brassica napus HOM05D002434 ORTHO05D002743 2.5e-08 62.8 131 35.1
BraA06t23956Z Brassica rapa HOM05D002434 ORTHO05D002743 2.5e-08 62.8 131 35.1
AUR62024295 Chenopodium quinoa HOM05D002434 ORTHO05D002743 2.5e-08 62.8 61 52.5
Eucgr.H02515 Eucalyptus grandis HOM05D002434 ORTHO05D002743 3.3e-08 62.4 53 58.5
Manes.12G024200 Manihot esculenta HOM05D002434 ORTHO05D002743 3.3e-08 62.4 51 58.8
MD13G1098100 Malus domestica HOM05D002434 ORTHO05D002743 4.3e-08 62.0 116 37.9
Hund06021 Selenicereus undatus HOM05D002434 ORTHO05D002743 4.3e-08 62.0 120 39.2
Aa31LG1G4130 Aethionema arabicum HOM05D002434 ORTHO05D002743 5.7e-08 61.6 87 43.7
AL1G21570 Arabidopsis lyrata HOM05D002434 ORTHO05D002743 5.7e-08 61.6 118 38.1
ATR0585G082 Amborella trichopoda HOM05D002434 ORTHO05D002743 9.7e-08 60.8 53 50.9
FAN07G1884 Fragaria x ananassa HOM05D002434 ORTHO05D002743 1.3e-07 60.5 115 31.3
CsaV3_5G031230 Cucumis sativus L. HOM05D002434 ORTHO05D002743 2.8e-07 59.3 95 41.1
Potri.010G045000 Populus trichocarpa HOM05D002434 ORTHO05D002743 4.8e-07 58.5 34 76.5
RcHm_v2.0_Chr4g0433381 Rosa chinensis HOM05D002434 ORTHO05D002743 8.2e-07 57.8 95 33.7
Atru.chr11.2116 Acer truncatum HOM05D002434 ORTHO05D002743 1.1e-06 57.4 85 36.5
Atru.chr11.2132 Acer truncatum HOM05D002434 ORTHO05D002743 1.1e-06 57.4 85 36.5
Psat2g094200 Pisum sativum HOM05D002434 ORTHO05D002743 2.4e-06 56.2 85 38.8
SEGI_11557 Sequoiadendron giganteum HOM05D002434 ORTHO05D049469 2.4e-06 56.2 37 64.9
Ca_04579_v3 Cicer arietinum L. HOM05D002434 ORTHO05D002743 4.1e-06 55.5 51 51.0
VMungo1215G1496 Vigna mungo HOM05D002434 ORTHO05D002743 4.1e-06 55.5 136 30.9
unitig_21.g20869 Utricularia gibba HOM05D002434 ORTHO05D002743 5.3e-06 55.1 52 50.0
Phvul.002G150900 Phaseolus vulgaris HOM05D002434 ORTHO05D002743 6.9e-06 54.7 133 31.6
Zm00001eb154480 Zea mays HOM05D002434 ORTHO05D002743 6.9e-06 54.7 53 49.1


User provided reference genes

Program Settings