Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 9.1e-77 290.0 134 100.0
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 5.6e-42 174.5 131 63.4
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 5.2e-40 167.9 140 61.4
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 5.2e-40 167.9 140 61.4
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 2.6e-39 165.6 135 59.3
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 4.9e-38 161.4 118 63.6
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 6.4e-38 161.0 110 69.1
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.8e-37 159.5 118 66.9
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 4.1e-37 158.3 114 64.9
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 3.5e-36 155.2 132 60.6
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 4.6e-36 154.8 132 59.8
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 7.8e-36 154.1 112 65.2
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 1.0e-35 153.7 135 58.5
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.0e-35 153.7 112 63.4
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 1.3e-35 153.3 133 58.6
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 1.9e-34 149.4 138 57.2
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 1.9e-34 149.4 141 56.0
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 4.3e-34 148.3 109 66.1
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 9.5e-34 147.1 109 65.1
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 1.2e-33 146.7 130 57.7
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.6e-33 146.4 113 61.1
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 4.7e-33 144.8 138 55.8
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 6.2e-33 144.4 129 55.0
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.4e-32 143.3 116 57.8
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 3.1e-32 142.1 114 59.6
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 3.1e-32 142.1 108 69.4
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 4.0e-32 141.7 122 60.7
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 5.2e-32 141.4 112 59.8
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 1.2e-31 140.2 137 54.0
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 1.2e-31 140.2 127 53.5
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 1.2e-31 140.2 141 55.3
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 5.8e-31 137.9 144 50.7
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 5.8e-31 137.9 140 54.3
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 5.8e-31 137.9 133 56.4
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 5.8e-31 137.9 137 53.3
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 1.3e-30 136.7 142 52.8
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 1.7e-30 136.3 118 59.3
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 1.7e-30 136.3 130 55.4
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.7e-30 136.3 130 55.4
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 2.2e-30 136.0 142 50.7
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 2.2e-30 136.0 116 57.8
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 2.2e-30 136.0 137 53.3
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 2.9e-30 135.6 138 50.7
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 2.9e-30 135.6 118 55.9
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 4.9e-30 134.8 138 50.7
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 6.4e-30 134.4 138 50.7
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 6.4e-30 134.4 144 49.3
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 8.3e-30 134.0 142 50.0
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 8.3e-30 134.0 142 50.0
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 8.3e-30 134.0 141 49.6
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 8.3e-30 134.0 134 49.3
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 1.9e-29 132.9 119 57.1
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 2.4e-29 132.5 133 57.1
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 2.4e-29 132.5 131 55.0
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 3.2e-29 132.1 136 51.5
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 3.2e-29 132.1 141 52.5
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 4.1e-29 131.7 140 50.7
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 4.1e-29 131.7 130 54.6
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 5.4e-29 131.3 141 53.2
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 5.4e-29 131.3 130 53.8
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 5.4e-29 131.3 141 49.6
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 7.0e-29 131.0 136 50.7
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 7.0e-29 131.0 138 49.3
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 7.0e-29 131.0 138 47.8
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 9.2e-29 130.6 138 50.0
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 9.2e-29 130.6 143 49.0
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 1.2e-28 130.2 127 54.3
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 1.2e-28 130.2 122 54.9
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 2.0e-28 129.4 138 48.6
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 2.7e-28 129.0 136 50.7
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 3.5e-28 128.6 153 50.3
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 4.6e-28 128.3 120 55.0
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 6.0e-28 127.9 96 65.6
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 7.8e-28 127.5 131 56.5
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 1.0e-27 127.1 124 50.0
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 3.9e-27 125.2 129 53.5
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 5.0e-27 124.8 109 56.9
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.1e-26 123.6 61 88.5
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.1e-26 123.6 129 51.2
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 1.5e-26 123.2 123 50.4
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 1.9e-26 122.9 137 50.4
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 2.5e-26 122.5 133 52.6
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 3.3e-26 122.1 140 50.7
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 3.3e-26 122.1 185 40.5
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 3.3e-26 122.1 133 51.9
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 7.3e-26 120.9 109 55.0
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 7.3e-26 120.9 136 53.7
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.2e-25 120.2 154 45.5
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.2e-25 120.2 141 51.8
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 1.6e-25 119.8 144 50.0
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.6e-25 119.8 113 56.6
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 2.1e-25 119.4 121 50.4
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 6.2e-25 117.9 119 53.8
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 1.1e-24 117.1 134 49.3
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 1.4e-24 116.7 116 56.9
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 1.4e-24 116.7 110 55.5
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 2.3e-24 115.9 112 55.4
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 6.8e-24 114.4 120 50.0
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 6.8e-24 114.4 141 46.8
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 8.9e-24 114.0 107 57.0
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 2.0e-23 112.8 125 53.6
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 2.6e-23 112.5 133 45.9
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 4.4e-23 111.7 134 49.3
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 5.8e-23 111.3 137 48.9
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 5.8e-23 111.3 137 48.9
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 5.8e-23 111.3 101 58.4
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 7.5e-23 110.9 129 44.2
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 7.5e-23 110.9 129 44.2
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 7.5e-23 110.9 102 57.8
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 9.8e-23 110.5 137 46.0
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.7e-22 109.8 116 49.1
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 2.2e-22 109.4 89 61.8
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 3.7e-22 108.6 89 59.6
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 6.4e-22 107.8 107 52.3
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 8.3e-22 107.5 96 55.2
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 1.1e-21 107.1 107 54.2
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 3.2e-21 105.5 103 52.4
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 4.1e-21 105.1 71 67.6
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 7.1e-21 104.4 66 71.2
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 9.2e-21 104.0 61 72.1
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 3.5e-20 102.1 59 72.9
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 1.7e-19 99.8 112 52.7
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 1.7e-19 99.8 64 68.8
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 1.7e-19 99.8 114 50.9
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 6.6e-19 97.8 119 43.7
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.5e-18 96.7 153 41.2
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 2.5e-18 95.9 110 51.8
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 5.6e-18 94.7 109 54.1
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 9.5e-18 94.0 107 47.7
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 4.7e-17 91.7 65 66.2
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 4.7e-17 91.7 117 45.3
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 1.2e-15 87.0 64 60.9
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 3.4e-15 85.5 52 69.2
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 5.8e-15 84.7 52 69.2
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 5.8e-15 84.7 129 40.3
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 7.6e-15 84.3 90 53.3
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 9.9e-15 84.0 50 68.0
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 9.9e-15 84.0 128 42.2
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 5.4e-13 78.2 54 64.8
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 5.4e-13 78.2 112 49.1
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 2.7e-12 75.9 49 61.2
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 6.6e-11 71.2 96 44.8
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 1.5e-10 70.1 47 68.1
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 5.6e-10 68.2 64 54.7
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 2.8e-09 65.9 34 85.3
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 6.8e-08 61.2 107 42.1
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 1.5e-07 60.1 50 54.0
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 3.4e-07 58.9 50 56.0
vmacro01351 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 5.8e-07 58.2 89 43.8
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 7.6e-07 57.8 37 70.3
SalBow1G0501 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.2e-06 56.2 63 46.0
SalBow1G4992 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.8e-06 55.5 63 44.4
SalBow1G3820 Salvia bowleyana HOM05D004542 ORTHO05D005380 4.9e-06 55.1 82 37.8
SEGI_34151 Sequoiadendron giganteum HOM05D004542 ORTHO05D005380 6.4e-06 54.7 35 68.6
vmacro01352 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 8.4e-06 54.3 25 92.0


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