Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001699.1 Olea europaea HOM05D002887 ORTHO05D003159 1.6e-54 215.7 101 100.0
Oeu029657.1 Olea europaea HOM05D002887 ORTHO05D003159 4.3e-47 191.0 100 88.0
MSTRG.19965 Avicennia marina HOM05D002887 ORTHO05D003159 3.0e-40 168.3 101 74.3
Cc09_g10430 Coffea canephora HOM05D002887 ORTHO05D003159 3.9e-40 167.9 101 78.2
Lj5A175G92 Lonicera japonica HOM05D002887 ORTHO05D003159 3.3e-39 164.9 98 76.5
Migut.B00042 Erythranthe guttata HOM05D002887 ORTHO05D003159 1.3e-38 162.9 101 72.3
SalBow1G7852 Salvia bowleyana HOM05D002887 ORTHO05D003159 1.1e-37 159.8 101 71.3
QL11p052640 Quercus lobata HOM05D002887 ORTHO05D003159 2.4e-37 158.7 93 78.5
Prupe.8G170700 Prunus persica HOM05D002887 ORTHO05D003159 5.3e-37 157.5 101 72.3
Ciclev10028005m.g Citrus clementina HOM05D002887 ORTHO05D003159 6.9e-37 157.1 101 72.3
arahy.Tifrunner.gnm1.ann1.DJ9YQ7 Arachis hypogaea HOM05D002887 ORTHO05D003159 2.0e-36 155.6 101 73.3
SGA_v2.0_scaffold32G13321 Striga asiatica HOM05D002887 ORTHO05D003159 2.6e-36 155.2 100 71.0
CANSAT25G0878 Cannabis sativa HOM05D002887 ORTHO05D003159 3.4e-36 154.8 101 69.3
Duzib248G0120 Durio zibethinus HOM05D002887 ORTHO05D003159 3.4e-36 154.8 101 71.3
Lalb_Chr06g0163831 Lupinus albus HOM05D002887 ORTHO05D003159 3.4e-36 154.8 101 71.3
PGR142G2418 Punica granatum HOM05D002887 ORTHO05D003159 3.4e-36 154.8 102 70.6
Lj5g0021290 Lotus japonicus HOM05D002887 ORTHO05D003159 1.0e-35 153.3 101 71.3
Dinv14138 Davidia involucrata HOM05D002887 ORTHO05D003159 1.3e-35 152.9 101 73.3
MD05G1127000 Malus domestica HOM05D002887 ORTHO05D003159 1.3e-35 152.9 98 73.5
Atru.chr5.3466 Acer truncatum HOM05D002887 ORTHO05D003159 1.7e-35 152.5 97 74.2
Cfa005310 Carpinus fangiana HOM05D002887 ORTHO05D003159 1.7e-35 152.5 93 75.3
DCAR_022829 Daucus carota HOM05D002887 ORTHO05D003159 1.7e-35 152.5 101 70.3
Actinidia20539 Actinidia chinensis HOM05D002887 ORTHO05D003159 2.2e-35 152.1 101 74.3
arahy.Tifrunner.gnm1.ann1.HJG5YQ Arachis hypogaea HOM05D002887 ORTHO05D003159 3.8e-35 151.4 101 72.3
CSS0044899 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 3.8e-35 151.4 101 72.3
Ah.01g023360 Amaranthus hybridus HOM05D002887 ORTHO05D003159 6.5e-35 150.6 101 70.3
AUR62009999 Chenopodium quinoa HOM05D002887 ORTHO05D003159 8.4e-35 150.2 101 69.3
AUR62012987 Chenopodium quinoa HOM05D002887 ORTHO05D003159 8.4e-35 150.2 101 69.3
Haze_02083 Corylus avellana HOM05D002887 ORTHO05D003159 8.4e-35 150.2 93 74.2
Psat6g232960 Pisum sativum HOM05D002887 ORTHO05D003159 8.4e-35 150.2 101 72.3
Sed0003666 Sechium edule HOM05D002887 ORTHO05D003159 8.4e-35 150.2 99 70.7
EL10Ac9g21324 Beta vulgaris HOM05D002887 ORTHO05D003159 1.1e-34 149.8 101 69.3
TPR.G2454 Trifolium pratense HOM05D002887 ORTHO05D003159 1.1e-34 149.8 101 72.3
FAN15G2445 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.9e-34 149.1 99 69.7
Manes.11G098300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.9e-34 149.1 101 67.3
Nn6g31882 Nelumbo nucifera HOM05D002887 ORTHO05D003159 1.9e-34 149.1 95 72.6
Sc08g0002650 Simmondsia chinensis HOM05D002887 ORTHO05D003159 3.2e-34 148.3 101 67.3
MELO3C013321.2 Cucumis melo HOM05D002887 ORTHO05D003159 4.2e-34 147.9 101 68.3
CsaV3_7G001330 Cucumis sativus L. HOM05D002887 ORTHO05D003159 4.2e-34 147.9 101 68.3
Medtr1g114010 Medicago truncatula HOM05D002887 ORTHO05D003159 4.2e-34 147.9 101 70.3
FAN20G1407 Fragaria x ananassa HOM05D002887 ORTHO05D003159 5.5e-34 147.5 101 67.3
Gohir.D12G036800 Gossypium hirsutum HOM05D002887 ORTHO05D003159 7.2e-34 147.1 97 71.1
Gorai.008G038000 Gossypium raimondii HOM05D002887 ORTHO05D003159 7.2e-34 147.1 97 71.1
Cpa.g.sc20.128 Carica papaya HOM05D002887 ORTHO05D003159 9.3e-34 146.7 97 72.2
Ca_03284_v3 Cicer arietinum L. HOM05D002887 ORTHO05D003159 9.3e-34 146.7 101 71.3
Rhsim11G0194600 Rhododendron simsii HOM05D002887 ORTHO05D003159 9.3e-34 146.7 101 71.3
Sabra04G0120900 Salix brachista HOM05D002887 ORTHO05D003159 9.3e-34 146.7 101 68.3
Hund00008 Selenicereus undatus HOM05D002887 ORTHO05D003159 9.3e-34 146.7 98 68.4
Phvul.007G016400 Phaseolus vulgaris HOM05D002887 ORTHO05D003159 1.2e-33 146.4 101 72.3
FvH4_2g15790 Fragaria vesca HOM05D002887 ORTHO05D003159 1.6e-33 146.0 97 69.1
FAN24G2689 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.6e-33 146.0 97 69.1
Nitab4.5_0003679g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.6e-33 146.0 102 64.7
Nitab4.5_0004557g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.1e-33 145.6 102 64.7
Peaxi162Scf00362g00430 Petunia axillaris HOM05D002887 ORTHO05D003159 2.1e-33 145.6 98 65.3
Potri.004G179571 Populus trichocarpa HOM05D002887 ORTHO05D003159 2.1e-33 145.6 101 68.3
Thecc.02G053100 Theobroma cacao HOM05D002887 ORTHO05D003159 2.7e-33 145.2 98 68.4
TAR625G0093 Trochodendron aralioides HOM05D002887 ORTHO05D003159 2.7e-33 145.2 101 68.3
RcHm_v2.0_Chr6g0279151 Rosa chinensis HOM05D002887 ORTHO05D003159 3.5e-33 144.8 98 69.4
GSVIVG01023957001 Vitis vinifera HOM05D002887 ORTHO05D003159 3.5e-33 144.8 101 69.3
FAN27G1571 Fragaria x ananassa HOM05D002887 ORTHO05D003159 4.6e-33 144.4 101 66.3
PGSC0003DMG400018645 Solanum tuberosum HOM05D002887 ORTHO05D003159 4.6e-33 144.4 99 65.7
Gohir.A12G035800 Gossypium hirsutum HOM05D002887 ORTHO05D003159 7.9e-33 143.7 97 69.1
Aqoxy6G01915 Aquilegia oxysepala HOM05D002887 ORTHO05D003159 1.0e-32 143.3 101 67.3
ClCG02G003820 Citrullus lanatus HOM05D002887 ORTHO05D003159 1.0e-32 143.3 101 66.3
Eucgr.I01466 Eucalyptus grandis HOM05D002887 ORTHO05D003159 1.0e-32 143.3 101 67.3
CAN.G588.111 Capsicum annuum HOM05D002887 ORTHO05D003159 2.3e-32 142.1 102 62.7
Glyma.20G105000 Glycine max HOM05D002887 ORTHO05D003159 2.3e-32 142.1 101 69.3
Solyc01g111890.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 3.9e-32 141.4 99 63.6
Sopen01g053930 Solanum pennellii HOM05D002887 ORTHO05D003159 3.9e-32 141.4 99 63.6
COL.COLO4_18011 Corchorus olitorius HOM05D002887 ORTHO05D003159 5.1e-32 141.0 97 68.0
PSO541G1018 Papaver somniferum HOM05D002887 ORTHO05D003159 6.7e-32 140.6 101 63.4
TWI75G1235 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.9e-31 139.0 87 74.7
VMungo0720G3147 Vigna mungo HOM05D002887 ORTHO05D003159 2.5e-31 138.7 102 70.6
PSO675G9002 Papaver somniferum HOM05D002887 ORTHO05D003159 5.7e-31 137.5 101 62.4
TWI79G0907 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.3e-30 136.3 101 67.3
CiPaw.05G086400 Carya illinoinensis HOM05D002887 ORTHO05D003159 1.6e-30 136.0 107 63.6
Duzib132G0895 Durio zibethinus HOM05D002887 ORTHO05D003159 1.6e-30 136.0 97 67.0
MD05G1089200 Malus domestica HOM05D002887 ORTHO05D003159 2.2e-30 135.6 103 68.0
MD10G1130200 Malus domestica HOM05D002887 ORTHO05D003159 2.2e-30 135.6 103 68.0
ECA246G2827 Erigeron canadensis HOM05D002887 ORTHO05D003159 4.8e-30 134.4 102 60.8
HanXRQChr17g0543831 Helianthus annuus HOM05D002887 ORTHO05D003159 1.1e-29 133.3 102 61.8
Lsat_1_v5_gn_3_47320 Lactuca sativa HOM05D002887 ORTHO05D003159 1.1e-29 133.3 102 59.8
Potri.009G139500 Populus trichocarpa HOM05D002887 ORTHO05D003159 2.4e-29 132.1 94 66.0
CiPaw.06G119200 Carya illinoinensis HOM05D002887 ORTHO05D003159 4.1e-29 131.3 81 72.8
vmacro02299 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 4.1e-29 131.3 97 64.9
Os03g0135400 Oryza sativa ssp. japonica HOM05D002887 ORTHO05D003159 1.5e-28 129.4 95 65.3
THA.LOC104804318 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 2.6e-28 128.6 91 67.0
A09p11180 Brassica napus HOM05D002887 ORTHO05D003159 1.7e-27 125.9 92 64.1
CDE05G3170 Ceratophyllum demersum HOM05D002887 ORTHO05D003159 2.2e-27 125.6 101 60.4
unitig_37.g12833 Utricularia gibba HOM05D002887 ORTHO05D003159 2.2e-27 125.6 84 63.1
BcaC04g22994 Brassica carinata HOM05D002887 ORTHO05D003159 2.9e-27 125.2 92 64.1
C09p13220 Brassica napus HOM05D002887 ORTHO05D003159 2.9e-27 125.2 92 64.1
BolC9t54215H Brassica oleracea HOM05D002887 ORTHO05D003159 2.9e-27 125.2 92 64.1
CDE05G0350 Ceratophyllum demersum HOM05D002887 ORTHO05D003159 2.9e-27 125.2 101 60.4
HPP92_003489 Vanilla planifolia HOM05D002887 ORTHO05D003159 8.5e-27 123.6 95 63.2
HPP92_026887 Vanilla planifolia HOM05D002887 ORTHO05D003159 8.5e-27 123.6 95 63.2
BraA09t36760Z Brassica rapa HOM05D002887 ORTHO05D003159 1.9e-26 122.5 92 63.0
CARHR107340 Cardamine hirsuta HOM05D002887 ORTHO05D003159 2.5e-26 122.1 92 63.0
Aa31LG8G14210 Aethionema arabicum HOM05D002887 ORTHO05D003159 4.2e-26 121.3 103 58.3
Thhalv10022585m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 4.2e-26 121.3 103 58.3
BcaB07g31745 Brassica carinata HOM05D002887 ORTHO05D003159 7.2e-26 120.6 87 65.5
Sp3g30310 Schrenkiella parvula HOM05D002887 ORTHO05D003159 7.2e-26 120.6 99 60.6
AL3G49810 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 1.2e-25 119.8 103 58.3
AT2G17020 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 1.2e-25 119.8 103 58.3
Carub.0003s3090 Capsella rubella HOM05D002887 ORTHO05D003159 4.6e-25 117.9 87 64.4
ATR0661G100 Amborella trichopoda HOM05D002887 ORTHO05D003159 5.7e-23 110.9 101 58.4
Oeu022292.1 Olea europaea HOM05D002887 ORTHO05D003159 2.6e-20 102.1 59 81.4
SEGI_36055 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 3.9e-16 88.2 101 49.5
MD10G1130400 Malus domestica HOM05D002887 ORTHO05D003159 1.8e-13 79.3 101 46.5
Pp3c16_16630 Physcomitrium patens HOM05D002887 ORTHO05D003159 3.1e-13 78.6 78 48.7
TWI79G0472 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 3.6e-09 65.1 62 51.6


User provided reference genes

Program Settings