Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.0e-54 216.5 110 100.0
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 2.4e-35 152.1 116 71.6
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 2.7e-34 148.7 119 68.1
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 1.5e-32 142.9 116 66.4
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.5e-32 142.9 126 63.5
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 9.5e-32 140.2 120 64.2
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.2e-31 139.8 116 69.0
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.6e-31 138.3 117 69.2
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.6e-31 138.3 117 69.2
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.6e-31 138.3 120 64.2
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 3.6e-31 138.3 115 64.3
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 4.7e-31 137.9 119 63.9
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 6.2e-31 137.5 119 63.9
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 1.4e-30 136.3 119 63.0
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 2.3e-30 135.6 118 65.3
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 2.0e-29 132.5 118 63.6
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 3.4e-29 131.7 121 62.0
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 5.8e-29 131.0 117 61.5
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 9.9e-29 130.2 115 63.5
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 3.7e-28 128.3 113 63.7
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 8.3e-28 127.1 110 64.5
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 1.9e-27 125.9 127 58.3
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 3.2e-27 125.2 123 56.9
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 4.1e-27 124.8 122 59.0
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 5.4e-27 124.4 111 65.8
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 5.4e-27 124.4 127 56.7
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 7.1e-27 124.0 116 58.6
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 7.1e-27 124.0 118 60.2
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 7.1e-27 124.0 111 64.0
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 9.2e-27 123.6 119 59.7
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.2e-26 123.2 122 59.0
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 3.5e-26 121.7 110 55.5
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.5e-26 121.7 121 59.5
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 4.6e-26 121.3 116 62.1
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 4.6e-26 121.3 121 58.7
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 6.0e-26 120.9 118 61.9
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 6.0e-26 120.9 125 57.6
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 7.8e-26 120.6 135 53.3
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 1.0e-25 120.2 128 53.1
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.0e-25 120.2 119 58.8
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 1.3e-25 119.8 120 56.7
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.7e-25 119.4 117 59.8
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.7e-25 119.4 115 60.0
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 2.3e-25 119.0 119 58.0
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 3.0e-25 118.6 127 53.5
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 5.1e-25 117.9 113 59.3
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 5.1e-25 117.9 120 57.5
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 6.6e-25 117.5 115 60.0
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 6.6e-25 117.5 115 60.0
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.5e-24 116.3 116 60.3
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 1.5e-24 116.3 121 57.9
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 1.9e-24 115.9 131 51.1
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 3.3e-24 115.2 127 53.5
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 4.3e-24 114.8 127 57.5
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 5.6e-24 114.4 119 58.0
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 5.6e-24 114.4 128 56.2
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 9.5e-24 113.6 130 53.1
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 1.2e-23 113.2 118 56.8
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.6e-23 112.8 130 55.4
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 2.1e-23 112.5 126 53.2
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 2.8e-23 112.1 120 55.0
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 2.8e-23 112.1 120 55.0
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 2.8e-23 112.1 130 50.8
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 2.8e-23 112.1 127 52.8
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 3.6e-23 111.7 119 55.5
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 4.7e-23 111.3 116 56.9
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.7e-23 111.3 130 51.5
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 6.2e-23 110.9 123 54.5
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 8.1e-23 110.5 120 55.8
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 8.1e-23 110.5 119 54.6
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 1.4e-22 109.8 129 51.9
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.8e-22 109.4 123 53.7
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 3.1e-22 108.6 130 51.5
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 3.1e-22 108.6 133 52.6
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 6.8e-22 107.5 104 58.7
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.2e-21 106.7 117 53.8
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 1.5e-21 106.3 124 50.0
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 3.4e-21 105.1 126 49.2
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 5.8e-21 104.4 125 52.0
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 7.6e-21 104.0 126 53.2
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 1.3e-20 103.2 119 49.6
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 2.9e-20 102.1 126 48.4
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 6.4e-20 100.9 131 49.6
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 8.4e-20 100.5 107 54.2
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 8.4e-20 100.5 107 54.2
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.1e-19 100.1 95 58.9
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.9e-19 99.4 119 49.6
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.3e-17 92.4 71 67.6
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 1.5e-16 89.7 122 47.5
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.9e-16 89.4 115 48.7
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 2.1e-15 85.9 62 67.7
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 2.0e-13 79.3 118 46.6
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 2.6e-13 79.0 42 85.7
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 1.3e-12 76.6 133 39.1
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.4e-11 73.2 111 44.1
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 3.5e-10 68.6 56 60.7
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 6.0e-10 67.8 48 75.0


User provided reference genes

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