Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 1.1e-121 439.9 215 100.0
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 8.7e-106 387.1 211 89.1
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 1.4e-87 326.6 216 75.0
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 9.1e-87 323.9 221 73.3
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 3.0e-82 308.9 216 70.4
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 2.8e-80 302.4 226 70.4
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 4.1e-79 298.5 226 67.7
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 9.1e-79 297.4 226 69.5
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.6e-78 296.6 226 68.6
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 5.9e-78 294.7 221 69.7
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 5.9e-78 294.7 226 67.3
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 1.7e-77 293.1 219 70.3
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 1.7e-77 293.1 221 67.4
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 2.2e-77 292.7 225 66.7
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 6.5e-77 291.2 226 68.1
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 8.5e-77 290.8 224 66.5
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 1.1e-76 290.4 226 66.4
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.5e-76 290.0 224 66.5
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 1.5e-76 290.0 226 67.3
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 1.9e-76 289.7 221 66.1
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 2.5e-76 289.3 224 66.1
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 4.2e-76 288.5 219 68.9
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 4.2e-76 288.5 208 70.2
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 4.2e-76 288.5 224 66.1
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 4.2e-76 288.5 226 64.6
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 5.5e-76 288.1 224 66.1
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 7.2e-76 287.7 226 66.4
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 1.2e-75 287.0 226 67.7
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 1.6e-75 286.6 218 69.7
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 2.7e-75 285.8 223 66.8
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 8.0e-75 284.3 227 64.8
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 3.0e-74 282.3 235 63.4
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 4.0e-74 282.0 220 68.2
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 8.8e-74 280.8 222 67.1
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 1.2e-73 280.4 226 65.0
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 1.5e-73 280.0 222 62.2
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 9.8e-73 277.3 228 64.9
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 9.8e-73 277.3 228 64.9
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 2.2e-72 276.2 219 68.9
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 2.2e-72 276.2 224 65.2
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 2.8e-72 275.8 221 63.8
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 3.7e-72 275.4 226 62.4
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 3.7e-72 275.4 226 64.2
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 8.3e-72 274.2 228 64.0
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 1.4e-71 273.5 229 62.9
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 2.4e-71 272.7 229 60.7
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 4.1e-71 271.9 222 62.6
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 9.1e-71 270.8 223 59.6
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 1.2e-70 270.4 229 62.9
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 1.6e-70 270.0 222 62.6
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 2.0e-70 269.6 219 62.1
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 2.0e-70 269.6 225 63.1
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 2.0e-70 269.6 219 62.6
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 2.7e-70 269.2 222 62.6
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 5.9e-70 268.1 226 62.4
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 5.9e-70 268.1 221 67.0
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 1.0e-69 267.3 227 61.2
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 2.9e-69 265.8 224 62.9
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 3.8e-69 265.4 223 61.9
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 5.0e-69 265.0 222 60.8
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.5e-68 263.5 222 63.1
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.9e-68 263.1 223 58.7
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 3.2e-68 262.3 221 63.8
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 4.2e-68 261.9 221 63.3
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 9.4e-68 260.8 224 58.5
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 1.2e-67 260.4 224 62.5
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 1.6e-67 260.0 222 63.5
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 2.7e-67 259.2 232 59.9
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 2.7e-67 259.2 214 62.1
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 4.7e-67 258.5 222 61.7
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 3.0e-66 255.8 214 61.2
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 4.0e-66 255.4 211 61.6
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 8.8e-66 254.2 210 63.8
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 1.5e-65 253.4 223 60.5
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 2.6e-65 252.7 216 61.1
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 3.4e-65 252.3 219 61.6
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 4.4e-65 251.9 238 57.6
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 5.7e-65 251.5 223 59.6
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 7.5e-65 251.1 212 59.4
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 1.7e-64 250.0 226 62.4
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 8.3e-64 247.7 212 60.8
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 8.3e-64 247.7 210 61.4
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 1.4e-63 246.9 228 59.2
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 3.1e-63 245.7 219 58.9
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 1.2e-62 243.8 222 59.0
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 3.5e-62 242.3 224 59.4
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 1.0e-61 240.7 217 59.9
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 1.0e-61 240.7 226 56.2
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 2.3e-61 239.6 224 59.8
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 6.6e-61 238.0 210 57.6
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 8.6e-61 237.7 208 61.5
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 8.6e-61 237.7 226 58.0
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 1.1e-60 237.3 226 57.5
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.5e-60 236.9 222 59.5
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 4.3e-60 235.3 222 59.5
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 5.6e-60 235.0 222 59.0
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 9.5e-60 234.2 219 56.6
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 1.6e-59 233.4 227 59.0
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 2.8e-59 232.6 216 58.8
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 2.8e-59 232.6 216 58.8
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 3.6e-59 232.3 223 55.6
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 4.7e-59 231.9 214 57.5
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 8.0e-59 231.1 217 55.3
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 1.4e-58 230.3 215 56.7
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 5.2e-58 228.4 219 55.7
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 5.2e-58 228.4 219 55.7
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 5.2e-58 228.4 219 55.7
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 5.2e-58 228.4 214 56.5
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 8.9e-58 227.6 219 55.3
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.2e-57 227.3 214 57.0
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.5e-57 226.9 243 52.3
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 1.5e-57 226.9 210 54.3
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 5.7e-57 224.9 219 54.8
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 5.7e-57 224.9 219 55.7
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 9.8e-57 224.2 210 54.3
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 1.3e-56 223.8 215 54.9
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 8.3e-56 221.1 168 66.1
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 2.4e-55 219.5 216 55.1
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 3.2e-55 219.2 142 72.5
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 4.1e-55 218.8 215 53.0
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 4.1e-55 218.8 229 52.8
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 5.4e-55 218.4 250 52.8
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 7.0e-55 218.0 215 52.6
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 7.0e-55 218.0 233 51.9
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 1.6e-54 216.9 212 56.6
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 2.0e-54 216.5 189 59.8
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 1.0e-53 214.2 211 55.9
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 2.3e-53 213.0 219 54.8
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 2.3e-53 213.0 188 60.1
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 2.5e-52 209.5 226 50.0
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 7.3e-52 208.0 237 48.5
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 3.6e-51 205.7 197 53.3
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 3.6e-51 205.7 224 50.0
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 8.0e-51 204.5 193 55.4
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 3.1e-50 202.6 152 65.8
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 5.2e-50 201.8 215 51.6
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 8.9e-50 201.1 182 57.1
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.2e-49 200.7 219 52.1
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 2.0e-49 199.9 196 51.5
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 7.5e-49 198.0 199 50.8
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 4.9e-48 195.3 222 51.8
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 1.4e-47 193.7 148 62.2
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 1.4e-47 193.7 140 65.0
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 3.2e-47 192.6 222 51.8
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 3.2e-47 192.6 185 55.1
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 1.6e-46 190.3 159 59.7
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 1.3e-45 187.2 143 60.8
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 1.7e-45 186.8 222 49.1
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 3.9e-45 185.7 222 48.2
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.5e-44 183.7 221 48.9
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 2.5e-44 183.0 215 47.9
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 2.1e-43 179.9 219 47.9
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 2.8e-43 179.5 218 50.5
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 2.8e-43 179.5 230 47.4
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 4.7e-43 178.7 222 45.5
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 4.7e-43 178.7 126 63.5
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 4.0e-42 175.6 222 48.2
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 1.7e-40 170.2 218 47.7
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 2.2e-40 169.9 154 59.7
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 1.4e-39 167.2 123 65.0
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 4.6e-38 162.2 128 60.9
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 2.3e-37 159.8 128 58.6
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 6.6e-37 158.3 126 59.5
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 1.1e-36 157.5 272 40.4
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 2.1e-35 153.3 132 56.8
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 2.8e-35 152.9 106 66.0
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 1.4e-34 150.6 138 54.3
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 2.3e-34 149.8 130 56.2
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 4.1e-31 139.0 98 68.4
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 4.1e-31 139.0 129 51.2
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 5.1e-29 132.1 208 43.3
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 1.2e-27 127.5 215 36.7
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 1.1e-26 124.4 224 40.6
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 1.1e-26 124.4 224 40.6
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 4.4e-25 119.0 85 69.4
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 1.5e-20 104.0 63 73.0
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 7.6e-17 91.7 54 72.2
CSS0045152 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 1.7e-16 90.5 109 52.3
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 4.6e-14 82.4 52 71.2
SGA_v2.0_scaffold1G00707 Striga asiatica HOM05D003890 ORTHO05D004514 1.7e-08 63.9 129 37.2
SGA_v2.0_scaffold141G35518 Striga asiatica HOM05D000145 ORTHO05D399266 2.4e-07 60.1 82 43.9


User provided reference genes

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