Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 5.6e-95 350.9 172 100.0
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 1.1e-63 246.9 175 72.6
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 5.3e-29 131.7 168 45.8
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.2e-26 122.5 182 46.7
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.2e-25 120.6 171 46.8
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.9e-24 115.5 182 45.6
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 3.9e-24 115.5 163 46.0
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 1.1e-23 114.0 171 43.9
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 1.1e-23 114.0 180 43.3
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 5.7e-23 111.7 166 42.2
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 2.2e-22 109.8 166 41.6
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 4.8e-22 108.6 175 45.1
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 8.2e-22 107.8 167 38.3
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 3.1e-21 105.9 150 44.7
MSTRG.6725 Avicennia marina HOM05D008142 ORTHO05D009674 2.0e-20 103.2 169 43.2
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.1e-18 97.4 179 41.9
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.4e-18 97.1 173 41.0
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 4.2e-18 95.5 173 38.2
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 7.2e-18 94.7 175 42.3
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 3.9e-16 89.0 174 39.1
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.1e-15 87.4 175 35.4
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 4.4e-15 85.5 197 36.0
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 5.7e-15 85.1 189 36.5
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 1.3e-14 84.0 148 38.5
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 1.7e-14 83.6 188 33.5
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 4.8e-14 82.0 188 35.6
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 6.3e-14 81.6 176 36.9
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 1.1e-13 80.9 175 37.1
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 1.4e-13 80.5 157 38.9
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 4.1e-13 79.0 165 38.2
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.3e-13 78.6 200 37.0
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 6.9e-13 78.2 192 36.5
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 1.2e-12 77.4 174 36.8
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.2e-12 77.4 166 38.0
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 2.6e-12 76.3 169 33.7
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.0e-11 74.3 187 33.7
DCAR_013786 Daucus carota HOM05D019704 ORTHO05D009674 6.5e-11 71.6 178 35.4
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.4e-10 70.5 152 36.8
Gohir.D01G033300 Gossypium hirsutum HOM05D023069 ORTHO05D009674 2.5e-10 69.7 165 34.5
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.2e-10 69.3 159 34.0
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 3.2e-10 69.3 157 35.7
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 7.2e-10 68.2 173 35.3
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.6e-09 67.0 180 35.6
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 1.6e-09 67.0 124 41.9
Gorai.002G040400 Gossypium raimondii HOM05D023069 ORTHO05D009674 2.1e-09 66.6 165 33.9
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.1e-09 66.6 153 35.3
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.1e-09 66.6 180 33.9
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 2.7e-09 66.2 159 33.3
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.7e-09 66.2 159 33.3
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.7e-09 65.5 153 34.6
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.0e-08 64.3 159 33.3
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.0e-08 64.3 153 34.6
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.0e-08 64.3 153 34.6
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 1.0e-08 64.3 171 35.1
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.0e-08 64.3 173 34.1
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.4e-08 63.9 153 34.0
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.8e-08 63.5 174 35.1
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.3e-08 63.2 169 32.0
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 3.0e-08 62.8 171 33.9
Gohir.A01G042700 Gossypium hirsutum HOM05D023069 ORTHO05D009674 3.9e-08 62.4 165 30.9
MBI10_g02220_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 3.9e-08 62.4 141 34.8
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 5.2e-08 62.0 151 33.8
Nitab4.5_0025344g0010 Nicotiana tabacum HOM05D065472 ORTHO05D022967 5.2e-08 62.0 100 39.0
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 5.2e-08 62.0 179 31.3
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 5.2e-08 62.0 169 32.5
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 6.7e-08 61.6 153 32.7
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 6.7e-08 61.6 151 33.8
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 8.8e-08 61.2 184 32.6
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 1.1e-07 60.8 158 36.7
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 1.5e-07 60.5 180 34.4
DCAR_017571 Daucus carota HOM05D019704 ORTHO05D009674 2.0e-07 60.1 178 32.6
DCAR_025853 Daucus carota HOM05D019704 ORTHO05D009674 2.0e-07 60.1 178 32.6
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.0e-07 60.1 178 30.3
Nitab4.5_0000923g0030 Nicotiana tabacum HOM05D065472 ORTHO05D022967 3.3e-07 59.3 161 30.4
SGA_v2.0_scaffold73G24334 Striga asiatica HOM05D019704 ORTHO05D009674 3.3e-07 59.3 169 33.1
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 5.7e-07 58.5 153 32.7
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 5.7e-07 58.5 154 31.8
COL.COLO4_17431 Corchorus olitorius HOM05D023069 ORTHO05D009674 1.3e-06 57.4 125 36.0
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 1.7e-06 57.0 180 29.4
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 1.7e-06 57.0 146 31.5
DCAR_017570 Daucus carota HOM05D019704 ORTHO05D009674 3.7e-06 55.8 179 31.3
Thecc.07G144300 Theobroma cacao HOM05D023069 ORTHO05D009674 4.8e-06 55.5 107 37.4
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 6.3e-06 55.1 181 30.4


User provided reference genes

Program Settings