Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001270.1 Olea europaea HOM05D005728 ORTHO05D005733 1.6e-62 242.7 130 100.0
Oeu030182.1 Olea europaea HOM05D005728 ORTHO05D005733 4.0e-37 158.3 112 71.4
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 7.6e-20 100.9 104 53.8
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 3.5e-17 92.0 106 51.9
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 6.6e-16 87.8 106 49.1
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 1.9e-15 86.3 130 40.8
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 6.2e-14 81.3 127 42.5
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 9.0e-13 77.4 106 45.3
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 2.6e-12 75.9 133 39.8
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 5.8e-12 74.7 133 36.8
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 1.3e-11 73.6 130 40.8
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 3.8e-11 72.0 122 41.0
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 3.8e-11 72.0 134 38.8
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 8.4e-11 70.9 130 39.2
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 1.1e-10 70.5 133 39.1
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.1e-10 70.5 134 40.3
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 4.2e-10 68.6 131 38.2
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 5.4e-10 68.2 133 36.8
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 7.1e-10 67.8 133 36.1
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.6e-09 66.6 115 41.7
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 2.1e-09 66.2 130 36.2
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 2.1e-09 66.2 133 33.8
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 2.7e-09 65.9 139 36.0
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 6.0e-09 64.7 128 35.2
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 7.8e-09 64.3 102 42.2
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 7.8e-09 64.3 102 42.2
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 1.0e-08 63.9 128 35.9
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.3e-08 63.5 128 35.2
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 1.3e-08 63.5 112 39.3
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 1.3e-08 63.5 109 41.3
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.7e-08 63.2 134 36.6
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.7e-08 63.2 128 34.4
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.7e-08 63.2 133 33.8
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 1.7e-08 63.2 109 43.1
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 3.0e-08 62.4 127 37.8
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 3.9e-08 62.0 135 32.6
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 5.1e-08 61.6 128 33.6
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 5.1e-08 61.6 128 33.6
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 8.7e-08 60.8 133 34.6
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 1.9e-07 59.7 120 38.3
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 2.5e-07 59.3 110 38.2
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 2.5e-07 59.3 94 39.4
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 3.3e-07 58.9 128 29.7
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 3.3e-07 58.9 124 34.7
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 5.6e-07 58.2 112 38.4
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 7.3e-07 57.8 109 36.7
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 7.3e-07 57.8 94 38.3
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 7.3e-07 57.8 133 32.3
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 1.3e-06 57.0 106 36.8
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 1.3e-06 57.0 131 32.8
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 2.1e-06 56.2 135 31.9
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.1e-06 56.2 127 35.4
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 2.8e-06 55.8 108 35.2
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 2.8e-06 55.8 108 38.0
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 4.8e-06 55.1 108 33.3
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 8.1e-06 54.3 104 35.6
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 8.1e-06 54.3 112 38.4


User provided reference genes

Program Settings