Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001162.1 Olea europaea HOM05D004325 ORTHO05D005470 1.7e-67 259.2 136 100.0
Cfa015290 Carpinus fangiana HOM05D004325 ORTHO05D005470 4.6e-60 234.6 136 90.4
CANSAT78G0850 Cannabis sativa HOM05D004325 ORTHO05D005470 7.8e-60 233.8 136 90.4
COL.COLO4_34588 Corchorus olitorius HOM05D004325 ORTHO05D005470 1.3e-59 233.0 133 89.5
Migut.N00036 Erythranthe guttata HOM05D004325 ORTHO05D005470 2.3e-59 232.3 136 89.7
VMungo0540G0568 Vigna mungo HOM05D004325 ORTHO05D005470 2.3e-59 232.3 136 87.5
Duzib151G0878 Durio zibethinus HOM05D004325 ORTHO05D005470 3.0e-59 231.9 131 90.8
Cc03_g00680 Coffea canephora HOM05D004325 ORTHO05D005470 3.9e-59 231.5 132 91.7
PGR004G2019 Punica granatum HOM05D004325 ORTHO05D005470 3.9e-59 231.5 136 87.5
Eucgr.E02007 Eucalyptus grandis HOM05D004325 ORTHO05D005470 5.1e-59 231.1 136 88.2
Thecc.04G303800 Theobroma cacao HOM05D004325 ORTHO05D005470 6.6e-59 230.7 136 87.5
GSVIVG01034969001 Vitis vinifera HOM05D004325 ORTHO05D005470 8.7e-59 230.3 129 92.2
arahy.Tifrunner.gnm1.ann1.H88EK8 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.1e-58 229.9 135 88.9
arahy.Tifrunner.gnm1.ann1.RG9184 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.1e-58 229.9 135 88.9
Haze_01324 Corylus avellana HOM05D004325 ORTHO05D005470 1.1e-58 229.9 134 88.1
Glyma.15G139100 Glycine max HOM05D004325 ORTHO05D005470 1.5e-58 229.6 136 86.0
arahy.Tifrunner.gnm1.ann1.NK7FC1 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.9e-58 229.2 135 88.1
Duzib052G1161 Durio zibethinus HOM05D004325 ORTHO05D005470 1.9e-58 229.2 133 88.0
CARHR287830 Cardamine hirsuta HOM05D004325 ORTHO05D005470 2.5e-58 228.8 133 88.0
Glyma.09G034400 Glycine max HOM05D004325 ORTHO05D005470 2.5e-58 228.8 136 86.0
MSTRG.24825 Avicennia marina HOM05D004325 ORTHO05D005470 3.3e-58 228.4 138 89.1
Lalb_Chr12g0200831 Lupinus albus HOM05D004325 ORTHO05D005470 3.3e-58 228.4 136 86.8
Peaxi162Scf00228g00059 Petunia axillaris HOM05D004325 ORTHO05D005470 3.3e-58 228.4 136 86.8
Gohir.A01G034900 Gossypium hirsutum HOM05D004325 ORTHO05D005470 4.3e-58 228.0 135 87.4
Phvul.006G119000 Phaseolus vulgaris HOM05D004325 ORTHO05D005470 4.3e-58 228.0 136 85.3
Atru.chr4.3046 Acer truncatum HOM05D004325 ORTHO05D005470 5.6e-58 227.6 128 90.6
TAR362G0217 Trochodendron aralioides HOM05D004325 ORTHO05D005470 7.3e-58 227.3 134 87.3
Ciclev10005911m.g Citrus clementina HOM05D004325 ORTHO05D005470 1.2e-57 226.5 133 86.5
Gohir.D01G023556 Gossypium hirsutum HOM05D004325 ORTHO05D005470 1.6e-57 226.1 135 87.4
Gorai.002G030800 Gossypium raimondii HOM05D004325 ORTHO05D005470 1.6e-57 226.1 135 87.4
Dinv44270 Davidia involucrata HOM05D004325 ORTHO05D005470 2.1e-57 225.7 127 92.9
Medtr2g033830 Medicago truncatula HOM05D004325 ORTHO05D005470 2.1e-57 225.7 133 88.0
THA.LOC104827099 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 2.1e-57 225.7 128 90.6
ECA233G2476 Erigeron canadensis HOM05D004325 ORTHO05D005470 2.8e-57 225.3 131 87.8
Thhalv10004957m.g Eutrema salsugineum HOM05D004325 ORTHO05D005470 2.8e-57 225.3 131 87.8
Manes.03G206300 Manihot esculenta HOM05D004325 ORTHO05D005470 2.8e-57 225.3 136 86.0
THA.LOC104802708 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 2.8e-57 225.3 136 85.3
TAR633G1272 Trochodendron aralioides HOM05D004325 ORTHO05D005470 2.8e-57 225.3 134 86.6
AT5G49510 Arabidopsis thaliana HOM05D004325 ORTHO05D005470 3.6e-57 224.9 131 88.5
Carub.0008s0936 Capsella rubella HOM05D004325 ORTHO05D005470 3.6e-57 224.9 131 88.5
Lj6g0013793 Lotus japonicus HOM05D004325 ORTHO05D005470 3.6e-57 224.9 136 85.3
RcHm_v2.0_Chr4g0425791 Rosa chinensis HOM05D004325 ORTHO05D005470 6.2e-57 224.2 136 85.3
AL8G23260 Arabidopsis lyrata HOM05D004325 ORTHO05D005470 8.1e-57 223.8 131 87.8
CSS0027180 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 8.1e-57 223.8 134 84.3
Cpa.g.sc9.38 Carica papaya HOM05D004325 ORTHO05D005470 8.1e-57 223.8 128 89.1
Ca_00969_v3 Cicer arietinum L. HOM05D004325 ORTHO05D005470 8.1e-57 223.8 131 88.5
PSO421G0271 Papaver somniferum HOM05D004325 ORTHO05D005470 8.1e-57 223.8 134 84.3
Prupe.1G115000 Prunus persica HOM05D004325 ORTHO05D005470 8.1e-57 223.8 133 87.2
Actinidia13352 Actinidia chinensis HOM05D004325 ORTHO05D005470 1.4e-56 223.0 131 87.8
FvH4_4g20250 Fragaria vesca HOM05D004325 ORTHO05D005470 1.4e-56 223.0 136 85.3
MBI19_g03261_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 1.4e-56 223.0 132 87.1
vmacro15176 Vaccinium macrocarpon HOM05D004325 ORTHO05D005470 1.4e-56 223.0 131 88.5
PSO832G3679 Papaver somniferum HOM05D004325 ORTHO05D005470 1.8e-56 222.6 132 85.6
Hma1.2p1_0013F.1_g008360 Hydrangea macrophylla HOM05D004325 ORTHO05D005470 2.4e-56 222.2 129 88.4
TPR.G28959 Trifolium pratense HOM05D004325 ORTHO05D005470 2.4e-56 222.2 131 87.8
TPR.G30807 Trifolium pratense HOM05D004325 ORTHO05D005470 2.4e-56 222.2 132 87.1
CiPaw.01G136700 Carya illinoinensis HOM05D004325 ORTHO05D005470 3.1e-56 221.9 129 88.4
Psat1g162400 Pisum sativum HOM05D004325 ORTHO05D005470 3.1e-56 221.9 131 87.8
Sed0024233 Sechium edule HOM05D004325 ORTHO05D005470 3.1e-56 221.9 138 84.8
CAN.G945.3 Capsicum annuum HOM05D004325 ORTHO05D005470 5.2e-56 221.1 136 86.0
ClCG05G006650 Citrullus lanatus HOM05D004325 ORTHO05D005470 5.2e-56 221.1 138 83.3
Os12g0562900 Oryza sativa ssp. japonica HOM05D004325 ORTHO05D005470 5.2e-56 221.1 132 87.1
Sed0016650 Sechium edule HOM05D004325 ORTHO05D005470 5.2e-56 221.1 138 84.1
TWI73G0086 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 5.2e-56 221.1 133 85.0
Sc25g0003210 Simmondsia chinensis HOM05D004325 ORTHO05D005470 6.9e-56 220.7 134 82.1
Ah.13g071390 Amaranthus hybridus HOM05D004325 ORTHO05D005470 9.0e-56 220.3 136 83.1
unitig_0.g2580 Utricularia gibba HOM05D004325 ORTHO05D005470 9.0e-56 220.3 135 83.0
Nitab4.5_0004165g0020 Nicotiana tabacum HOM05D004325 ORTHO05D005470 1.2e-55 219.9 136 86.0
Sp2g19810 Schrenkiella parvula HOM05D004325 ORTHO05D005470 1.2e-55 219.9 131 86.3
SpUn0021_0040 Schrenkiella parvula HOM05D004325 ORTHO05D005470 1.2e-55 219.9 131 86.3
HPP92_027563 Vanilla planifolia HOM05D004325 ORTHO05D005470 1.2e-55 219.9 128 87.5
Aa31LG11G8140 Aethionema arabicum HOM05D004325 ORTHO05D005470 1.5e-55 219.5 145 81.4
BcaB04g19615 Brassica carinata HOM05D004325 ORTHO05D005470 1.5e-55 219.5 133 84.2
MD13G1150800 Malus domestica HOM05D004325 ORTHO05D005470 1.5e-55 219.5 133 85.0
Sabra08G0078100 Salix brachista HOM05D004325 ORTHO05D005470 1.5e-55 219.5 137 85.4
Solyc05g053390.4 Solanum lycopersicum HOM05D004325 ORTHO05D005470 1.5e-55 219.5 136 86.0
Sopen05g031900 Solanum pennellii HOM05D004325 ORTHO05D005470 1.5e-55 219.5 136 86.0
CsaV3_3G015280 Cucumis sativus L. HOM05D004325 ORTHO05D005470 2.0e-55 219.2 138 82.6
BcaC04g23736 Brassica carinata HOM05D004325 ORTHO05D005470 2.6e-55 218.8 131 85.5
C09p05230 Brassica napus HOM05D004325 ORTHO05D005470 2.6e-55 218.8 131 85.5
MD16G1151300 Malus domestica HOM05D004325 ORTHO05D005470 2.6e-55 218.8 133 84.2
PGSC0003DMG400027209 Solanum tuberosum HOM05D004325 ORTHO05D005470 3.4e-55 218.4 136 86.0
ATR0693G272 Amborella trichopoda HOM05D004325 ORTHO05D005470 4.4e-55 218.0 132 84.8
A09p04850 Brassica napus HOM05D004325 ORTHO05D005470 4.4e-55 218.0 131 85.5
AUR62039261 Chenopodium quinoa HOM05D004325 ORTHO05D005470 4.4e-55 218.0 134 82.8
Eucgr.D01575 Eucalyptus grandis HOM05D004325 ORTHO05D005470 4.4e-55 218.0 136 83.8
Potri.008G103400 Populus trichocarpa HOM05D004325 ORTHO05D005470 4.4e-55 218.0 137 84.7
SGA_v2.0_scaffold528G52737 Striga asiatica HOM05D004325 ORTHO05D005470 4.4e-55 218.0 155 77.4
BraA09t36122Z Brassica rapa HOM05D004325 ORTHO05D005470 5.8e-55 217.6 131 84.7
CSS0047955 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 5.8e-55 217.6 129 86.0
PSO063G1209 Papaver somniferum HOM05D004325 ORTHO05D005470 5.8e-55 217.6 132 83.3
PSO724G0368 Papaver somniferum HOM05D004325 ORTHO05D005470 7.6e-55 217.2 132 83.3
A06p38330 Brassica napus HOM05D004325 ORTHO05D005470 9.9e-55 216.9 131 85.5
C07p39920 Brassica napus HOM05D004325 ORTHO05D005470 9.9e-55 216.9 131 85.5
BolC7t44524H Brassica oleracea HOM05D004325 ORTHO05D005470 9.9e-55 216.9 131 85.5
BraA06t26747Z Brassica rapa HOM05D004325 ORTHO05D005470 9.9e-55 216.9 131 85.5
Rhsim02G0002800 Rhododendron simsii HOM05D004325 ORTHO05D005470 1.3e-54 216.5 129 86.8
Hund11985 Selenicereus undatus HOM05D004325 ORTHO05D005470 1.3e-54 216.5 133 81.2
AUR62016229 Chenopodium quinoa HOM05D004325 ORTHO05D005470 1.7e-54 216.1 133 82.7
Potri.010G147600 Populus trichocarpa HOM05D004325 ORTHO05D005470 2.9e-54 215.3 137 83.9
Nitab4.5_0000647g0250 Nicotiana tabacum HOM05D004325 ORTHO05D005470 3.8e-54 214.9 136 84.6
HanXRQChr17g0569361 Helianthus annuus HOM05D004325 ORTHO05D005470 1.1e-53 213.4 131 84.0
Lsat_1_v5_gn_1_117981 Lactuca sativa HOM05D004325 ORTHO05D005470 1.1e-53 213.4 125 88.0
Hund03133 Selenicereus undatus HOM05D004325 ORTHO05D005470 1.1e-53 213.4 132 83.3
Zm00001eb136920 Zea mays HOM05D004325 ORTHO05D005470 1.1e-53 213.4 132 84.1
Lalb_Chr13g0298551 Lupinus albus HOM05D004325 ORTHO05D005470 1.4e-53 213.0 136 81.6
Nitab4.5_0000177g0050 Nicotiana tabacum HOM05D004325 ORTHO05D005470 4.2e-53 211.5 144 78.5
Nitab4.5_0000891g0010 Nicotiana tabacum HOM05D004325 ORTHO05D005470 4.2e-53 211.5 144 78.5
Zm00001eb028520 Zea mays HOM05D004325 ORTHO05D005470 1.2e-52 209.9 128 85.2
CDE01G0033 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 1.6e-52 209.5 136 78.7
FAN12G3971 Fragaria x ananassa HOM05D004325 ORTHO05D005470 1.7e-51 206.1 169 68.6
Eucgr.E01982 Eucalyptus grandis HOM05D004325 ORTHO05D005470 6.6e-51 204.1 123 87.0
FAN07G0536 Fragaria x ananassa HOM05D004325 ORTHO05D005470 2.5e-50 202.2 178 65.2
Aqoxy3G01635 Aquilegia oxysepala HOM05D004325 ORTHO05D005470 7.3e-50 200.7 131 80.2
Sabra10G0113800 Salix brachista HOM05D004325 ORTHO05D005470 3.1e-48 195.3 181 63.5
Lj3A833G34 Lonicera japonica HOM05D004325 ORTHO05D005470 6.9e-48 194.1 110 92.7
BolC9t53449H Brassica oleracea HOM05D004325 ORTHO05D005470 4.5e-47 191.4 191 58.6
TWI09G1034 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 2.2e-46 189.1 130 77.7
SEGI_09014 Sequoiadendron giganteum HOM05D004325 ORTHO05D005470 2.9e-46 188.7 131 72.5
Mapoly0057s0039 Marchantia polymorpha HOM05D004325 ORTHO05D005470 6.4e-46 187.6 124 74.2
Sopen01g024490 Solanum pennellii HOM05D004325 ORTHO05D005470 8.4e-46 187.2 110 88.2
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 1.9e-45 186.0 109 89.0
EL10Ac3g05527 Beta vulgaris HOM05D004325 ORTHO05D005470 7.1e-45 184.1 109 84.4
SMO116G0307 Selaginella moellendorffii HOM05D004325 ORTHO05D005470 1.2e-44 183.3 125 72.0
Pp3c8_18130 Physcomitrium patens HOM05D004325 ORTHO05D005470 3.7e-41 171.8 128 68.0
Eucgr.D01598 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.4e-40 169.9 109 82.6
AagrBONN_evm.TU.Sc2ySwM_344.4436 Anthoceros agrestis HOM05D004325 ORTHO05D005470 3.1e-40 168.7 129 64.3
Eucgr.E01999 Eucalyptus grandis HOM05D004325 ORTHO05D005470 3.1e-40 168.7 136 69.1
Eucgr.D01586 Eucalyptus grandis HOM05D004325 ORTHO05D005470 9.0e-40 167.2 102 83.3
Nn3g21742 Nelumbo nucifera HOM05D004325 ORTHO05D005470 2.0e-39 166.0 134 69.4
QL06p012738 Quercus lobata HOM05D004325 ORTHO05D005470 1.1e-37 160.2 99 83.8
Eucgr.D01580 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.9e-34 149.4 93 82.8
CiPaw.02G073600 Carya illinoinensis HOM05D004325 ORTHO05D005470 1.6e-33 146.4 154 57.1
Eucgr.D01581 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.9e-30 135.6 82 86.6
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 2.5e-29 132.5 92 77.2
MELO3C006723.2 Cucumis melo HOM05D004325 ORTHO05D005470 1.6e-28 129.8 85 76.5
CDE12G0495 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 2.7e-28 129.0 93 73.1
HPP92_017247 Vanilla planifolia HOM05D004325 ORTHO05D005470 7.9e-28 127.5 75 85.3
Glyma.07G238200 Glycine max HOM05D004325 ORTHO05D005470 6.7e-27 124.4 75 84.0
MBI14_g36884_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 6.7e-27 124.4 104 69.2
Eucgr.D01577 Eucalyptus grandis HOM05D004325 ORTHO05D005470 8.7e-27 124.0 102 66.7
MSTRG.3849 Avicennia marina HOM05D004325 ORTHO05D005470 1.5e-26 123.2 82 75.6
CBR_g12436 Chara braunii HOM05D004325 ORTHO05D005470 2.5e-26 122.5 91 64.8
Glyma.17G035301 Glycine max HOM05D004325 ORTHO05D005470 7.4e-26 120.9 101 69.3
MCO08G322 Micromonas commoda HOM05D004325 ORTHO05D005470 1.1e-24 117.1 117 48.7
PRCOL_00000812 Prasinoderma coloniale HOM05D004325 ORTHO05D005470 1.8e-24 116.3 125 45.6
Haze_26161 Corylus avellana HOM05D004325 ORTHO05D005470 1.3e-22 110.2 132 41.7
Actinidia18462 Actinidia chinensis HOM05D004325 ORTHO05D005470 5.0e-22 108.2 69 82.6
Cre06.g261650 Chlamydomonas reinhardtii HOM05D004325 ORTHO05D005470 4.6e-20 101.7 117 41.0
Actinidia31558 Actinidia chinensis HOM05D004325 ORTHO05D005470 3.3e-18 95.5 62 79.0
Eucgr.E01978 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.5e-15 86.7 60 71.7
HPP92_017255 Vanilla planifolia HOM05D004325 ORTHO05D005470 8.5e-14 80.9 45 91.1
CSS0004484 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.9e-13 79.7 111 52.3
CSS0039135 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 5.5e-13 78.2 111 51.4
CSS0044452 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 5.5e-13 78.2 111 51.4
CSS0031168 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 2.1e-12 76.3 111 50.5
CSS0013046 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 2.7e-12 75.9 111 50.5
DCAR_026989 Daucus carota HOM05D004325 ORTHO05D005470 8.8e-11 70.9 40 87.5
QL06p012730 Quercus lobata HOM05D004325 ORTHO05D005470 1.5e-10 70.1 35 100.0
Solyc01g058597.1 Solanum lycopersicum HOM05D004325 ORTHO05D005470 4.4e-10 68.6 36 91.7
TPR.G25439 Trifolium pratense HOM05D004325 ORTHO05D005470 3.1e-08 62.4 109 41.3
Actinidia14254 Actinidia chinensis HOM05D004325 ORTHO05D005470 2.9e-06 55.8 36 80.6


User provided reference genes

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