Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 0.0e+00 1171.0 602 100.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.1e-201 707.2 602 62.8
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.3e-194 683.7 556 63.5
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 6.3e-194 681.4 598 61.4
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.8e-193 679.9 598 61.0
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 1.6e-189 666.8 579 61.8
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 3.6e-189 665.6 591 59.9
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 3.0e-188 662.5 585 59.5
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 3.0e-188 662.5 596 57.2
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 2.0e-187 659.8 580 59.0
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.8e-185 653.3 596 57.7
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 1.3e-183 647.1 580 60.2
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 6.5e-183 644.8 595 56.8
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 6.5e-183 644.8 595 57.8
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.1e-182 644.0 595 56.3
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.5e-182 643.7 571 58.3
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.5e-182 642.9 593 57.5
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 4.7e-181 638.6 624 55.6
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.1e-179 634.0 594 56.9
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 2.0e-179 633.3 572 58.4
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 1.3e-178 630.6 594 55.7
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 9.1e-177 624.4 562 57.3
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 2.0e-176 623.2 596 56.4
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 3.2e-174 615.9 599 54.8
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 4.2e-174 615.5 596 56.0
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.2e-173 614.0 619 53.0
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.7e-173 612.8 597 55.9
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 6.8e-172 608.2 630 54.6
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 1.2e-171 607.4 597 54.4
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 4.4e-171 605.5 596 53.4
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.3e-170 604.0 581 54.0
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 1.4e-169 600.5 605 53.2
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.8e-169 600.1 596 53.9
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.0e-167 594.3 584 53.6
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.3e-167 594.0 584 54.3
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 2.9e-167 592.8 614 54.1
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 2.9e-167 592.8 588 54.4
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 1.1e-166 590.9 582 53.3
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.5e-166 589.7 569 54.1
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 4.2e-166 589.0 567 55.4
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 7.2e-166 588.2 593 52.8
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 6.1e-165 585.1 614 51.5
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 6.8e-164 581.6 581 52.7
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 2.6e-163 579.7 571 53.6
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 5.7e-163 578.6 587 52.5
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 6.3e-162 575.1 608 51.5
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 1.1e-161 574.3 631 50.1
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.2e-160 570.9 569 53.6
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.0e-160 570.1 569 53.6
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 5.9e-160 568.5 599 50.8
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 3.8e-159 565.8 581 52.5
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 1.5e-158 563.9 580 52.2
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 1.9e-158 563.5 560 55.0
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 2.5e-158 563.1 576 51.7
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.0e-157 558.1 569 53.3
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 4.0e-156 555.8 618 49.8
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 2.0e-155 553.5 584 52.2
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 2.6e-155 553.1 594 52.2
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 2.6e-155 553.1 450 60.4
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 2.6e-155 553.1 587 51.8
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 7.5e-155 551.6 679 45.9
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 2.9e-154 549.7 569 52.2
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 3.7e-154 549.3 584 52.7
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 9.2e-153 544.7 586 51.5
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.6e-152 543.9 576 51.4
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 2.0e-152 543.5 587 50.8
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 4.6e-152 542.3 590 51.0
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 4.6e-152 542.3 573 50.4
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.0e-151 541.2 681 45.2
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 3.0e-151 539.7 577 51.5
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 1.1e-150 537.7 577 51.1
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.9e-150 537.0 586 51.2
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 3.3e-150 536.2 579 50.9
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 2.1e-149 533.5 579 50.8
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 3.6e-149 532.7 587 49.9
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 2.9e-146 523.1 640 47.5
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 6.2e-141 505.4 524 51.9
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 1.3e-138 497.7 681 43.6
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 3.9e-135 486.1 555 49.0
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 5.6e-134 482.3 418 61.5
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 5.8e-131 472.2 574 49.3
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 2.2e-130 470.3 586 45.7
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.1e-126 458.0 572 49.5
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 4.3e-126 456.1 449 56.3
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 5.6e-126 455.7 584 46.1
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 6.9e-124 448.7 449 51.9
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.0e-123 447.2 456 51.3
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.4e-121 440.3 419 53.5
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 4.3e-118 429.5 441 53.7
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 5.6e-118 429.1 419 51.8
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 2.0e-115 420.6 636 41.7
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 1.8e-111 407.5 429 53.4
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 4.3e-110 402.9 493 45.0
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 7.4e-110 402.1 380 56.6
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 6.2e-109 399.1 420 53.1
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.4e-105 387.9 470 47.9
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.8e-103 380.9 373 52.8
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 5.6e-102 375.9 417 47.0
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.1e-94 351.7 583 38.4
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 6.9e-92 342.4 632 36.7
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 4.8e-85 319.7 585 35.4
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 7.2e-81 305.8 319 54.5
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 2.0e-62 244.6 604 29.8
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 7.0e-60 236.1 245 51.4
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 2.7e-51 207.6 211 52.1
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 4.2e-49 200.3 272 41.9
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 2.6e-46 191.0 195 51.8
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 3.6e-40 170.6 160 55.0
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 3.4e-38 164.1 221 43.9
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 1.6e-35 155.2 615 26.2
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 3.7e-29 134.0 315 31.4
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 5.0e-26 123.6 211 34.6
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 1.4e-23 115.5 112 58.9
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 2.4e-20 104.8 176 43.2
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 3.3e-17 94.4 78 61.5
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 6.8e-15 86.7 329 28.6
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 8.9e-15 86.3 77 58.4
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 5.8e-14 83.6 95 51.6
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.3e-13 82.4 65 61.5
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 2.1e-11 75.1 47 70.2
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 1.4e-07 62.4 70 51.4
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.4e-07 62.4 70 51.4
CAN.G404.26 Capsicum annuum HOM05D006452 ORTHO05D008068 2.0e-06 58.5 62 45.2
MBI05_g22668_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 9.9e-06 56.2 62 50.0


User provided reference genes

Program Settings