Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 3.1e-119 431.8 216 100.0
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.0e-82 310.5 210 76.2
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 3.4e-81 305.4 200 77.0
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 1.4e-74 283.5 200 74.0
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.4e-73 278.9 166 83.1
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.2e-72 276.2 163 82.8
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 2.9e-72 275.8 192 73.4
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 4.9e-72 275.0 165 79.4
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.4e-71 272.7 170 77.6
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 2.4e-71 272.7 192 72.9
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 4.1e-71 271.9 153 85.0
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 5.4e-71 271.6 177 75.7
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 7.0e-71 271.2 163 80.4
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 9.2e-71 270.8 166 79.5
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 9.2e-71 270.8 153 86.3
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 9.2e-71 270.8 153 86.3
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 1.2e-70 270.4 153 86.3
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 2.7e-70 269.2 160 81.2
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 3.5e-70 268.9 167 78.4
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 3.5e-70 268.9 167 78.4
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 3.5e-70 268.9 167 78.4
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 4.6e-70 268.5 164 79.9
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 5.9e-70 268.1 193 72.5
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 7.8e-70 267.7 158 79.7
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 1.3e-69 266.9 163 80.4
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.3e-69 266.9 196 68.9
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.7e-69 266.5 153 83.7
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 3.0e-69 265.8 152 84.2
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 3.0e-69 265.8 168 78.0
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 5.0e-69 265.0 194 69.6
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 6.6e-69 264.6 174 76.4
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 8.6e-69 264.2 163 80.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.1e-68 263.8 163 79.8
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 1.5e-68 263.5 187 72.2
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.5e-68 263.5 163 78.5
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 1.9e-68 263.1 174 74.1
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 1.9e-68 263.1 167 79.6
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 5.6e-68 261.5 163 76.1
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 7.3e-68 261.2 191 70.2
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 7.3e-68 261.2 161 80.7
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 1.2e-67 260.4 166 75.9
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.2e-67 260.4 162 79.6
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 1.2e-67 260.4 175 73.1
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 1.2e-67 260.4 166 78.9
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 1.2e-67 260.4 194 70.1
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 2.8e-67 259.2 175 73.1
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 2.8e-67 259.2 198 69.2
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.8e-67 259.2 159 81.8
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 2.8e-67 259.2 196 66.8
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 6.2e-67 258.1 158 79.7
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 6.2e-67 258.1 157 78.3
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 6.2e-67 258.1 206 68.4
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 6.2e-67 258.1 175 73.1
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 8.0e-67 257.7 153 79.1
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 8.0e-67 257.7 160 77.5
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 8.0e-67 257.7 176 73.9
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 8.0e-67 257.7 176 73.9
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 1.0e-66 257.3 153 82.4
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 2.3e-66 256.1 193 69.9
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 2.6e-65 252.7 165 75.8
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 3.4e-65 252.3 151 78.1
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 4.4e-65 251.9 148 81.8
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 5.8e-65 251.5 232 62.1
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 7.5e-65 251.1 164 74.4
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 4.9e-64 248.4 148 80.4
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 6.4e-64 248.1 156 76.9
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.4e-63 246.9 196 65.8
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.4e-63 246.9 190 68.9
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 2.4e-63 246.1 183 66.7
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 9.2e-63 244.2 149 78.5
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 1.2e-62 243.8 159 76.7
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 1.2e-62 243.8 161 75.2
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 3.0e-61 239.2 148 79.7
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 5.0e-61 238.4 155 73.5
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 1.5e-60 236.9 143 82.5
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.9e-60 236.5 138 82.6
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 4.3e-60 235.3 141 83.0
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 4.3e-60 235.3 141 83.0
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 2.1e-59 233.0 162 72.2
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 5.8e-57 224.9 172 66.9
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 3.7e-56 222.2 219 57.5
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 4.9e-56 221.9 192 62.5
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.9e-55 219.9 160 71.9
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 1.9e-55 219.9 143 74.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 3.2e-55 219.2 193 62.2
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 7.1e-55 218.0 152 70.4
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.1e-54 216.5 132 78.8
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 3.5e-54 215.7 148 68.2
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 4.6e-54 215.3 145 72.4
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.9e-52 209.9 152 65.1
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.9e-52 209.9 151 68.2
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 1.2e-51 207.2 124 79.0
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 3.1e-50 202.6 152 63.2
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 2.1e-46 189.9 170 62.9
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 1.9e-44 183.3 129 67.4
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 6.2e-43 178.3 158 57.6
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 4.0e-42 175.6 157 58.0
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 5.8e-41 171.8 103 75.7
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 2.2e-40 169.9 115 70.4
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 2.4e-39 166.4 153 57.5
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 9.3e-39 164.5 124 70.2
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 5.1e-37 158.7 149 55.7
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 1.9e-36 156.8 162 53.1
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 5.6e-36 155.2 94 77.7
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 7.3e-36 154.8 168 53.6
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.4e-34 150.6 96 77.1
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.2e-30 137.5 79 77.2
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 1.2e-30 137.5 149 51.0
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 3.3e-28 129.4 160 39.4
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 4.6e-22 109.0 151 46.4
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-20 102.8 72 68.1
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.2e-14 84.3 79 58.2
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 9.0e-10 68.2 42 78.6


User provided reference genes

Program Settings