Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 2.8e-124 448.7 235 100.0
Oeu019418.1 Olea europaea HOM05D004036 ORTHO05D004576 2.9e-20 103.2 58 82.8
Oeu003545.1 Olea europaea HOM05D010458 ORTHO05D007849 3.8e-20 102.8 59 83.1
Oeu042658.1 Olea europaea HOM05D010458 ORTHO05D291435 6.1e-18 95.5 97 53.6
Oeu064485.1 Olea europaea HOM05D010458 ORTHO05D007849 1.5e-16 90.9 112 49.1
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 3.1e-14 83.2 64 62.5
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 5.3e-14 82.4 64 62.5
Oeu006037.1 Olea europaea HOM05D065694 ORTHO05D289674 9.1e-14 81.6 132 42.4
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 2.0e-13 80.5 66 57.6
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 2.6e-13 80.1 63 63.5
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 3.5e-13 79.7 64 57.8
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 3.5e-13 79.7 64 57.8
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 4.5e-13 79.3 67 56.7
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 5.9e-13 79.0 64 59.4
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 5.9e-13 79.0 66 60.6
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 7.7e-13 78.6 56 66.1
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 7.7e-13 78.6 66 59.1
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 1.0e-12 78.2 67 56.7
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 1.0e-12 78.2 63 61.9
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.3e-12 77.8 63 61.9
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 1.3e-12 77.8 63 57.1
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.7e-12 77.4 66 57.6
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.2e-12 77.0 60 61.7
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 2.2e-12 77.0 66 57.6
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 2.2e-12 77.0 64 56.2
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 2.9e-12 76.6 66 54.5
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 3.8e-12 76.3 56 66.1
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 3.8e-12 76.3 64 56.2
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 3.8e-12 76.3 64 56.2
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 3.8e-12 76.3 63 57.1
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 3.8e-12 76.3 64 56.2
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 5.0e-12 75.9 63 58.7
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 5.0e-12 75.9 63 58.7
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 6.5e-12 75.5 63 57.1
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 6.5e-12 75.5 64 59.4
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 6.5e-12 75.5 63 57.1
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 6.5e-12 75.5 64 56.2
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 6.5e-12 75.5 64 59.4
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 8.5e-12 75.1 57 63.2
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 8.5e-12 75.1 64 56.2
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 1.1e-11 74.7 64 57.8
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 1.1e-11 74.7 56 60.7
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 1.1e-11 74.7 55 63.6
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 1.5e-11 74.3 63 55.6
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 1.5e-11 74.3 58 60.3
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 1.5e-11 74.3 58 60.3
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 1.5e-11 74.3 64 54.7
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 1.9e-11 73.9 65 56.9
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.9e-11 73.9 66 54.5
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 2.5e-11 73.6 64 54.7
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 2.5e-11 73.6 64 53.1
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 3.2e-11 73.2 55 63.6
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 3.2e-11 73.2 55 63.6
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 3.2e-11 73.2 54 63.0
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 4.2e-11 72.8 63 57.1
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 4.2e-11 72.8 64 53.1
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 4.2e-11 72.8 54 61.1
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 5.5e-11 72.4 64 53.1
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 5.5e-11 72.4 57 61.4
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 5.5e-11 72.4 61 59.0
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 5.5e-11 72.4 54 59.3
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 5.5e-11 72.4 62 54.8
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 9.4e-11 71.6 57 59.6
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 9.4e-11 71.6 61 54.1
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 9.4e-11 71.6 64 51.6
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 9.4e-11 71.6 64 51.6
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 1.2e-10 71.2 64 51.6
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 1.2e-10 71.2 57 63.2
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 1.6e-10 70.9 54 61.1
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 1.6e-10 70.9 63 55.6
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 2.1e-10 70.5 53 66.0
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 2.7e-10 70.1 54 61.1
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 2.7e-10 70.1 55 60.0
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 3.6e-10 69.7 54 61.1
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 4.7e-10 69.3 63 52.4
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 4.7e-10 69.3 63 54.0
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 4.7e-10 69.3 54 61.1
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 4.7e-10 69.3 54 57.4
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 6.1e-10 68.9 62 54.8
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 6.1e-10 68.9 53 60.4
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 8.0e-10 68.6 54 57.4
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.0e-09 68.2 54 55.6
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 1.0e-09 68.2 55 58.2
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 1.0e-09 68.2 53 64.2
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 1.4e-09 67.8 54 55.6
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 1.4e-09 67.8 54 57.4
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 1.8e-09 67.4 55 60.0
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 1.8e-09 67.4 59 55.9
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 1.8e-09 67.4 53 62.3
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 2.3e-09 67.0 53 60.4
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 2.3e-09 67.0 53 60.4
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 3.0e-09 66.6 54 57.4
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.0e-09 66.6 55 58.2
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 3.0e-09 66.6 53 62.3
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 5.2e-09 65.9 54 53.7
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.2e-09 65.9 55 58.2
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 5.2e-09 65.9 54 61.1
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 5.2e-09 65.9 56 53.6
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 6.7e-09 65.5 53 58.5
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 8.8e-09 65.1 57 54.4
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 1.2e-08 64.7 53 62.3
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 2.6e-08 63.5 52 59.6
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 3.3e-08 63.2 51 54.9
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 5.7e-08 62.4 48 58.3
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 7.5e-08 62.0 65 50.8
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 7.5e-08 62.0 53 52.8
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 1.3e-07 61.2 53 54.7
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 1.3e-07 61.2 57 47.4
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.3e-07 61.2 56 50.0
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 1.7e-07 60.8 53 54.7
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.7e-07 60.8 54 51.9
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.7e-07 60.8 56 53.6
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 3.7e-07 59.7 54 51.9
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 4.8e-07 59.3 54 55.6
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 6.3e-07 58.9 53 56.6
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 6.3e-07 58.9 53 50.9
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.1e-06 58.2 57 49.1
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 1.4e-06 57.8 55 50.9
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 1.8e-06 57.4 51 52.9
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 2.4e-06 57.0 52 55.8
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 3.1e-06 56.6 48 52.1
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 4.1e-06 56.2 54 48.1
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 5.3e-06 55.8 48 54.2
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 9.1e-06 55.1 36 63.9


User provided reference genes

Program Settings