Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.6e-269 930.6 469 100.0
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.2e-218 762.3 473 81.8
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 8.3e-218 760.4 469 81.7
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.4e-217 759.6 471 81.3
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.8e-217 759.2 471 83.0
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 2.4e-217 758.8 468 81.0
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.1e-217 758.4 476 80.9
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 2.0e-216 755.7 471 81.1
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.7e-216 755.4 472 81.1
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.5e-216 755.0 472 80.9
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 4.5e-216 754.6 469 81.2
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 4.5e-216 754.6 477 80.7
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 5.9e-216 754.2 488 77.5
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.3e-215 752.3 477 80.5
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 5.0e-215 751.1 472 80.3
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 5.0e-215 751.1 472 80.5
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 6.6e-215 750.7 469 79.7
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.1e-214 750.0 472 80.9
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.5e-214 749.6 471 80.3
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.5e-214 749.6 469 80.4
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 3.3e-214 748.4 488 77.3
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.2e-213 746.5 475 77.7
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 2.1e-213 745.7 471 80.7
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 6.1e-213 744.2 471 79.6
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.4e-212 743.0 469 80.6
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 6.8e-212 740.7 469 79.7
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.5e-211 739.6 470 79.1
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 2.6e-211 738.8 472 79.7
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.3e-210 736.5 473 79.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 4.9e-210 734.6 472 78.4
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 6.4e-210 734.2 473 79.5
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 1.4e-209 733.0 470 77.2
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.4e-209 733.0 468 79.9
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.4e-209 732.3 469 79.3
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 2.4e-209 732.3 473 79.1
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 4.1e-209 731.5 469 78.3
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 1.2e-208 729.9 474 77.6
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.6e-208 729.6 472 77.5
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.0e-208 729.2 477 78.0
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.7e-208 728.8 473 78.6
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 3.5e-208 728.4 472 78.8
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 6.0e-208 727.6 470 77.9
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 7.8e-208 727.2 477 77.8
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.0e-207 726.9 473 76.5
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 6.6e-207 724.2 471 77.9
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 6.6e-207 724.2 469 77.8
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.5e-206 723.0 469 77.4
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 3.3e-206 721.8 470 78.3
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.6e-205 719.5 472 78.6
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 3.6e-205 718.4 483 78.5
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 6.2e-205 717.6 469 77.4
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 8.0e-205 717.2 469 77.2
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.3e-204 715.7 470 77.7
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 5.2e-204 714.5 477 77.6
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 6.8e-204 714.1 467 77.1
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 1.2e-203 713.4 442 81.9
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.5e-203 713.0 441 81.6
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 4.4e-203 711.4 535 71.4
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 4.4e-203 711.4 472 77.8
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 5.8e-203 711.1 477 77.4
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 3.7e-202 708.4 489 75.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.4e-201 706.4 471 77.1
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.4e-201 706.4 470 78.5
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.9e-201 706.1 468 77.4
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 3.2e-201 705.3 446 80.7
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 4.1e-201 704.9 470 78.1
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 9.2e-201 703.7 469 77.0
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.6e-200 703.0 471 76.9
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 1.0e-199 700.3 470 76.6
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.3e-199 699.1 471 76.4
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 3.9e-199 698.4 473 76.5
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 6.6e-199 697.6 471 77.1
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.1e-198 696.8 471 77.1
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.1e-198 696.8 475 75.4
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.5e-198 695.7 470 75.1
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.4e-196 689.9 470 75.7
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.5e-195 686.4 470 74.0
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 7.5e-195 684.1 480 75.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 4.9e-194 681.4 473 73.8
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 4.9e-194 681.4 429 78.8
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 6.4e-194 681.0 460 73.9
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.9e-193 679.5 472 74.6
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 4.1e-193 678.3 477 73.2
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 1.0e-191 673.7 374 88.8
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.9e-191 671.8 468 75.9
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.4e-188 663.3 471 73.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-187 660.2 373 87.4
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.9e-185 652.9 470 73.6
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 4.0e-180 635.2 386 81.1
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 2.3e-175 619.4 433 70.9
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 7.3e-174 614.4 348 87.1
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 4.9e-170 601.7 348 85.6
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 5.8e-163 578.2 472 65.7
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 2.9e-162 575.9 360 80.6
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 1.4e-161 573.5 424 66.7
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 7.9e-160 567.8 358 77.7
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.0e-159 565.8 397 68.5
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 4.8e-157 558.5 416 66.8
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 4.2e-153 545.4 400 73.2
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 1.6e-149 533.5 301 86.0
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.0e-148 527.7 396 64.9
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.2e-144 517.3 295 87.8
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.8e-140 503.4 311 81.7
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 5.1e-135 485.3 280 84.3
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 7.4e-134 481.5 420 58.8
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.6e-126 456.4 319 71.2
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.7e-126 455.3 235 91.9
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.7e-126 455.3 235 91.9
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.8e-125 452.2 434 57.6
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.1e-124 451.1 348 68.7
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.2e-123 447.6 433 58.2
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.9e-107 392.1 425 48.0
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 5.8e-94 349.0 258 72.1
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 5.1e-74 282.7 334 45.5
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 2.4e-60 237.3 368 39.7
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 9.0e-55 218.8 419 35.8
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.8e-48 196.4 284 40.8
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.1e-47 193.7 133 74.4
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.5e-46 191.4 100 93.0
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.3e-45 188.3 357 33.9
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 3.8e-45 186.8 148 63.5
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 8.4e-45 185.7 365 33.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.9e-44 184.5 100 90.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.1e-40 171.0 152 63.8
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.6e-38 164.1 379 30.3
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 2.9e-37 160.6 92 87.0
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.3e-21 108.6 51 94.1
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.7e-16 91.7 88 53.4
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 2.2e-13 81.3 44 93.2
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 3.7e-08 63.9 39 82.1
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 8.2e-08 62.8 160 27.5
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 1.1e-07 62.4 37 83.8


User provided reference genes

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