Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 5.9e-169 597.4 299 100.0
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.2e-60 237.7 302 47.4
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 3.8e-59 232.6 265 52.1
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.3e-56 223.4 259 51.4
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.0e-55 220.3 259 51.0
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.8e-54 216.5 261 48.7
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.7e-54 216.1 304 46.7
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 1.1e-53 214.5 155 69.7
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 5.4e-53 212.2 302 47.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 5.4e-53 212.2 262 48.5
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 7.0e-53 211.8 251 50.2
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 9.1e-53 211.5 259 48.6
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.3e-51 207.6 169 65.1
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 2.3e-51 206.8 268 47.4
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 8.6e-51 204.9 304 42.1
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 5.5e-50 202.2 260 46.5
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 2.8e-49 199.9 269 43.9
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 8.0e-49 198.4 303 41.3
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 5.2e-48 195.7 261 43.3
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 6.8e-48 195.3 298 41.9
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 8.9e-48 194.9 297 41.8
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.2e-47 194.5 305 41.6
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 3.4e-47 193.0 139 68.3
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 5.7e-47 192.2 250 47.2
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 9.8e-47 191.4 269 45.4
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 1.7e-46 190.7 251 45.8
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 3.7e-46 189.5 255 44.3
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 3.7e-46 189.5 251 43.8
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.7e-46 189.5 259 44.0
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 8.3e-46 188.3 255 43.9
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 1.4e-45 187.6 264 44.3
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 3.1e-45 186.4 250 42.4
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 4.1e-45 186.0 198 52.5
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 7.0e-45 185.3 250 42.4
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.6e-44 184.1 222 49.1
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 5.9e-44 182.2 296 39.9
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.0e-43 181.4 153 63.4
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 1.7e-43 180.6 269 43.5
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 1.7e-43 180.6 285 39.6
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 2.9e-43 179.9 274 39.1
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 5.0e-43 179.1 275 40.4
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 5.0e-43 179.1 275 40.4
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 5.0e-43 179.1 275 40.4
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 6.6e-43 178.7 281 41.3
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 6.6e-43 178.7 261 42.9
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 8.6e-43 178.3 287 39.7
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.1e-42 177.9 275 40.0
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.1e-42 177.9 272 43.0
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.9e-42 177.2 286 39.2
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 2.5e-42 176.8 288 40.3
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 2.5e-42 176.8 273 41.0
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 2.5e-42 176.8 258 42.2
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 3.3e-42 176.4 256 43.8
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 3.3e-42 176.4 259 39.8
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.3e-42 176.4 259 40.5
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 4.3e-42 176.0 275 40.0
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 7.3e-42 175.3 162 56.8
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.2e-41 174.5 288 39.2
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 2.8e-41 173.3 297 39.4
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 2.8e-41 173.3 275 39.6
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.6e-41 172.9 251 40.2
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 3.6e-41 172.9 300 38.3
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 4.7e-41 172.6 270 40.0
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 8.0e-41 171.8 259 39.0
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 1.4e-40 171.0 297 38.0
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 3.1e-40 169.9 221 44.8
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 4.0e-40 169.5 281 39.5
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 8.9e-40 168.3 297 36.7
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.5e-39 167.5 142 59.2
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.5e-39 167.5 247 43.7
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 2.0e-39 167.2 259 40.2
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 2.0e-39 167.2 274 41.2
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 2.6e-39 166.8 274 38.0
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 2.6e-39 166.8 264 40.2
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 9.8e-39 164.9 237 42.6
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 9.8e-39 164.9 247 42.9
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.3e-38 164.5 294 35.7
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 2.2e-38 163.7 257 39.3
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 2.2e-38 163.7 224 39.7
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 8.3e-38 161.8 151 55.6
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 8.3e-38 161.8 309 38.8
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 2.4e-37 160.2 205 45.4
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 6.0e-36 155.6 304 37.2
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 6.0e-36 155.6 295 36.3
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.0e-35 154.8 230 41.3
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.3e-34 149.8 309 37.5
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 1.2e-33 147.9 305 37.7
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 4.7e-33 146.0 205 43.9
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.1e-32 144.8 224 40.6
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 8.9e-32 141.7 269 36.4
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.2e-31 141.4 251 38.6
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 4.9e-30 136.0 107 60.7
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 4.7e-25 119.4 101 61.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 4.1e-21 106.3 79 64.6
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 8.1e-17 92.0 141 39.0
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 6.8e-16 89.0 166 40.4
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.4e-14 82.0 143 39.2
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 6.0e-12 75.9 66 54.5
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 9.6e-10 68.6 145 34.5
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 9.9e-07 58.5 141 29.8


User provided reference genes

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