Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000723.1 Olea europaea HOM05D003231 ORTHO05D003865 1.4e-44 182.6 91 100.0
Oeu014728.1 Olea europaea HOM05D003231 ORTHO05D003865 1.2e-27 126.3 92 71.7
Nitab4.5_0011301g0030 Nicotiana tabacum HOM05D003231 ORTHO05D003865 5.9e-19 97.4 89 51.7
SalBow1G6495 Salvia bowleyana HOM05D003231 ORTHO05D003865 5.9e-19 97.4 75 57.3
Sopen06g009630 Solanum pennellii HOM05D003231 ORTHO05D003865 1.7e-18 95.9 92 54.3
SGA_v2.0_scaffold464G52005 Striga asiatica HOM05D003231 ORTHO05D003865 1.7e-18 95.9 73 63.0
Solyc04g064810.4 Solanum lycopersicum HOM05D003231 ORTHO05D003865 2.2e-18 95.5 92 54.3
Sopen04g026770 Solanum pennellii HOM05D003231 ORTHO05D003865 2.2e-18 95.5 92 54.3
PGSC0003DMG400024848 Solanum tuberosum HOM05D003231 ORTHO05D003865 2.2e-18 95.5 81 61.7
MSTRG.10658 Avicennia marina HOM05D003231 ORTHO05D003865 2.9e-18 95.1 91 57.1
Dinv37392 Davidia involucrata HOM05D003231 ORTHO05D003865 3.8e-18 94.7 84 56.0
Cc01_g06730 Coffea canephora HOM05D003231 ORTHO05D003865 6.5e-18 94.0 94 51.1
Dinv06253 Davidia involucrata HOM05D003231 ORTHO05D003865 2.5e-17 92.0 94 53.2
CAN.G744.15 Capsicum annuum HOM05D003231 ORTHO05D003865 4.2e-17 91.3 91 48.4
Dinv09239 Davidia involucrata HOM05D003231 ORTHO05D003865 4.2e-17 91.3 84 52.4
Peaxi162Scf00033g00092 Petunia axillaris HOM05D003231 ORTHO05D003865 7.2e-17 90.5 89 48.3
TWI63G1568 Tripterygium wilfordii HOM05D003231 ORTHO05D003865 1.6e-16 89.4 93 49.5
Dinv09240 Davidia involucrata HOM05D003231 ORTHO05D003865 2.7e-16 88.6 84 52.4
Phvul.001G057800 Phaseolus vulgaris HOM05D003231 ORTHO05D003865 2.7e-16 88.6 87 54.0
Glyma.17G201100 Glycine max HOM05D003231 ORTHO05D003865 4.6e-16 87.8 76 60.5
arahy.Tifrunner.gnm1.ann1.BPJ3T6 Arachis hypogaea HOM05D003231 ORTHO05D003865 7.9e-16 87.0 95 51.6
TWI32G0035 Tripterygium wilfordii HOM05D003231 ORTHO05D003865 7.9e-16 87.0 93 47.3
arahy.Tifrunner.gnm1.ann1.1UP6DU Arachis hypogaea HOM05D003231 ORTHO05D003865 1.0e-15 86.7 95 51.6
Glyma.11G175328 Glycine max HOM05D003231 ORTHO05D003865 1.0e-15 86.7 76 59.2
Lj2A622G59 Lonicera japonica HOM05D003231 ORTHO05D003865 1.4e-15 86.3 93 49.5
Peaxi162Scf00263g00042 Petunia axillaris HOM05D003231 ORTHO05D003865 1.4e-15 86.3 91 48.4
Prupe.1G462700 Prunus persica HOM05D003231 ORTHO05D003865 1.4e-15 86.3 92 51.1
SGA_v2.0_scaffold63G21827 Striga asiatica HOM05D003231 ORTHO05D003865 1.4e-15 86.3 84 58.3
Glyma.14G132600 Glycine max HOM05D003231 ORTHO05D003865 1.8e-15 85.9 60 68.3
COL.COLO4_18634 Corchorus olitorius HOM05D003231 ORTHO05D003865 3.0e-15 85.1 94 51.1
Duzib168G0939 Durio zibethinus HOM05D003231 ORTHO05D003865 5.1e-15 84.3 81 51.9
Nitab4.5_0000299g0150 Nicotiana tabacum HOM05D003231 ORTHO05D003865 6.7e-15 84.0 91 48.4
CSS0026000 Camellia sinensis var. sinensis HOM05D003231 ORTHO05D003865 8.8e-15 83.6 89 50.6
Glyma.06G075600 Glycine max HOM05D003231 ORTHO05D003865 1.1e-14 83.2 93 47.3
Nitab4.5_0010241g0010 Nicotiana tabacum HOM05D003231 ORTHO05D003865 1.1e-14 83.2 91 47.3
Oeu061897.1 Olea europaea HOM05D003231 ORTHO05D003865 1.1e-14 83.2 79 54.4
Gohir.A06G108000 Gossypium hirsutum HOM05D003231 ORTHO05D003865 1.5e-14 82.8 73 57.5
Potri.006G281200 Populus trichocarpa HOM05D003231 ORTHO05D003865 1.5e-14 82.8 90 54.4
QL12p024649 Quercus lobata HOM05D003231 ORTHO05D003865 1.5e-14 82.8 62 61.3
Glyma.04G074400 Glycine max HOM05D003231 ORTHO05D003865 1.9e-14 82.4 93 49.5
Manes.16G138400 Manihot esculenta HOM05D003231 ORTHO05D003865 1.9e-14 82.4 92 47.8
Nitab4.5_0002974g0070 Nicotiana tabacum HOM05D003231 ORTHO05D003865 1.9e-14 82.4 89 44.9
Phvul.009G100100 Phaseolus vulgaris HOM05D003231 ORTHO05D003865 1.9e-14 82.4 88 50.0
Migut.K00422 Erythranthe guttata HOM05D003231 ORTHO05D003865 2.5e-14 82.0 94 51.1
Hma1.2p1_0080F.1_g042200 Hydrangea macrophylla HOM05D003231 ORTHO05D003865 2.5e-14 82.0 87 52.9
Hma1.2p1_1544F.1_g289870 Hydrangea macrophylla HOM05D003231 ORTHO05D003865 2.5e-14 82.0 87 54.0
Lalb_Chr24g0402411 Lupinus albus HOM05D003231 ORTHO05D003865 2.5e-14 82.0 73 60.3
Thecc.09G002000 Theobroma cacao HOM05D003231 ORTHO05D003865 2.5e-14 82.0 83 53.0
vmacro07258 Vaccinium macrocarpon HOM05D003231 ORTHO05D003865 2.5e-14 82.0 88 50.0
Eucgr.D01078 Eucalyptus grandis HOM05D003231 ORTHO05D003865 3.3e-14 81.6 88 46.6
Gohir.D06G110100 Gossypium hirsutum HOM05D003231 ORTHO05D003865 3.3e-14 81.6 73 56.2
Gorai.010G125100 Gossypium raimondii HOM05D003231 ORTHO05D003865 3.3e-14 81.6 73 56.2
Sabra06G0217500 Salix brachista HOM05D003231 ORTHO05D003865 3.3e-14 81.6 62 62.9
CANSAT25G1032 Cannabis sativa HOM05D003231 ORTHO05D003865 4.3e-14 81.3 84 44.0
Sabra06G0217300 Salix brachista HOM05D003231 ORTHO05D003865 4.3e-14 81.3 62 62.9
Lj5g0000952 Lotus japonicus HOM05D003231 ORTHO05D003865 5.7e-14 80.9 80 51.2
CAN.G963.1 Capsicum annuum HOM05D003231 ORTHO05D003865 7.4e-14 80.5 86 46.5
Potri.006G281400 Populus trichocarpa HOM05D003231 ORTHO05D003865 9.7e-14 80.1 62 61.3
TAR362G1099 Trochodendron aralioides HOM05D003231 ORTHO05D003865 9.7e-14 80.1 94 46.8
GSVIVG01006883001 Vitis vinifera HOM05D003231 ORTHO05D003865 9.7e-14 80.1 85 48.2
Lj1g0002631 Lotus japonicus HOM05D003231 ORTHO05D003865 1.3e-13 79.7 94 47.9
MD15G1110400 Malus domestica HOM05D003231 ORTHO05D003865 1.3e-13 79.7 77 51.9
MD08G1133800 Malus domestica HOM05D003231 ORTHO05D003865 1.7e-13 79.3 95 45.3
Lalb_Chr11g0064081 Lupinus albus HOM05D003231 ORTHO05D003865 2.2e-13 79.0 41 78.0
Rhsim08G0224200 Rhododendron simsii HOM05D003231 ORTHO05D003865 2.2e-13 79.0 88 48.9
Lj2A622T60 Lonicera japonica HOM05D003231 ORTHO05D003865 2.8e-13 78.6 75 50.7
TPR.G12121 Trifolium pratense HOM05D003231 ORTHO05D003865 2.8e-13 78.6 80 51.2
VMungo1309G1009 Vigna mungo HOM05D003231 ORTHO05D003865 2.8e-13 78.6 76 53.9
Cpa.g.sc148.16 Carica papaya HOM05D003231 ORTHO05D003865 3.7e-13 78.2 93 48.4
Ciclev10011920m.g Citrus clementina HOM05D003231 ORTHO05D003865 3.7e-13 78.2 86 46.5
Manes.01G174800 Manihot esculenta HOM05D003231 ORTHO05D003865 3.7e-13 78.2 71 53.5
Manes.07G090400 Manihot esculenta HOM05D003231 ORTHO05D003865 3.7e-13 78.2 71 53.5
Cfa013246 Carpinus fangiana HOM05D003231 ORTHO05D003865 4.8e-13 77.8 88 47.7
Lalb_Chr23g0268911 Lupinus albus HOM05D003231 ORTHO05D003865 4.8e-13 77.8 77 48.1
GSVIVG01003918001 Vitis vinifera HOM05D003231 ORTHO05D003865 4.8e-13 77.8 85 47.1
RcHm_v2.0_Chr6g0312251 Rosa chinensis HOM05D003231 ORTHO05D003865 6.3e-13 77.4 90 44.4
Medtr1g010010 Medicago truncatula HOM05D003231 ORTHO05D003865 8.2e-13 77.0 58 60.3
Gohir.D13G185500 Gossypium hirsutum HOM05D003231 ORTHO05D003865 1.1e-12 76.6 91 49.5
PGR044G0019 Punica granatum HOM05D003231 ORTHO05D003865 1.1e-12 76.6 40 77.5
Thhalv10000179m.g Eutrema salsugineum HOM05D003231 ORTHO05D003865 1.4e-12 76.3 86 45.3
Psat6g031880 Pisum sativum HOM05D003231 ORTHO05D003865 1.8e-12 75.9 89 48.3
Carub.0004s0366 Capsella rubella HOM05D003231 ORTHO05D003865 2.4e-12 75.5 72 52.8
Rhsim04G0219000 Rhododendron simsii HOM05D003231 ORTHO05D003865 2.4e-12 75.5 90 50.0
Ciclev10011811m.g Citrus clementina HOM05D003231 ORTHO05D003865 3.1e-12 75.1 127 39.4
Medtr3g108690 Medicago truncatula HOM05D003231 ORTHO05D003865 3.1e-12 75.1 41 78.0
VMungo0647G2491 Vigna mungo HOM05D003231 ORTHO05D003865 3.1e-12 75.1 76 51.3
AL7G20980 Arabidopsis lyrata HOM05D003231 ORTHO05D003865 4.1e-12 74.7 90 45.6
Nn7g36616 Nelumbo nucifera HOM05D003231 ORTHO05D003865 4.1e-12 74.7 92 42.4
Actinidia05692 Actinidia chinensis HOM05D003231 ORTHO05D003865 6.9e-12 73.9 79 55.7
AT4G31080 Arabidopsis thaliana HOM05D003231 ORTHO05D003865 6.9e-12 73.9 88 47.7
BcaB03g12675 Brassica carinata HOM05D003231 ORTHO05D003865 6.9e-12 73.9 74 52.7
A08p18890 Brassica napus HOM05D003231 ORTHO05D003865 6.9e-12 73.9 85 48.2
BraA08t33850Z Brassica rapa HOM05D003231 ORTHO05D003865 6.9e-12 73.9 85 48.2
Carub.0007s0944 Capsella rubella HOM05D003231 ORTHO05D003865 6.9e-12 73.9 88 46.6
DCAR_019594 Daucus carota HOM05D003231 ORTHO05D003865 6.9e-12 73.9 79 49.4
Sp7g28960 Schrenkiella parvula HOM05D003231 ORTHO05D003865 6.9e-12 73.9 88 45.5
Sed0011155 Sechium edule HOM05D003231 ORTHO05D003865 6.9e-12 73.9 93 40.9
Ah.13g075260 Amaranthus hybridus HOM05D003231 ORTHO05D003865 9.1e-12 73.6 89 41.6
CANSAT25G0033 Cannabis sativa HOM05D003231 ORTHO05D003865 1.2e-11 73.2 84 44.0
CARHR238990 Cardamine hirsuta HOM05D003231 ORTHO05D003865 1.2e-11 73.2 75 54.7
Duzib150G0378 Durio zibethinus HOM05D003231 ORTHO05D003865 1.2e-11 73.2 85 47.1
BraA04t17473Z Brassica rapa HOM05D003231 ORTHO05D003865 1.5e-11 72.8 75 49.3
CiPaw.07G214900 Carya illinoinensis HOM05D003231 ORTHO05D003865 1.5e-11 72.8 93 43.0
Lalb_Chr08g0243641 Lupinus albus HOM05D003231 ORTHO05D003865 1.5e-11 72.8 41 70.7
Psat5g025840 Pisum sativum HOM05D003231 ORTHO05D003865 1.5e-11 72.8 42 78.6
Sp4g03330 Schrenkiella parvula HOM05D003231 ORTHO05D003865 1.5e-11 72.8 81 45.7
vmacro00794 Vaccinium macrocarpon HOM05D003231 ORTHO05D003865 1.5e-11 72.8 41 80.5
AT2G24330 Arabidopsis thaliana HOM05D003231 ORTHO05D003865 2.0e-11 72.4 72 50.0
A04p18620 Brassica napus HOM05D003231 ORTHO05D003865 2.0e-11 72.4 75 49.3
CiPaw.08G017500 Carya illinoinensis HOM05D003231 ORTHO05D003865 2.0e-11 72.4 42 73.8
BcaC02g08477 Brassica carinata HOM05D003231 ORTHO05D003865 2.6e-11 72.0 75 49.3
C04p53940 Brassica napus HOM05D003231 ORTHO05D003865 2.6e-11 72.0 75 49.3
BolC4t26942H Brassica oleracea HOM05D003231 ORTHO05D003865 2.6e-11 72.0 75 49.3
Haze_21690 Corylus avellana HOM05D003231 ORTHO05D003865 2.6e-11 72.0 104 41.3
DCAR_021019 Daucus carota HOM05D003231 ORTHO05D003865 2.6e-11 72.0 92 44.6
Actinidia23641 Actinidia chinensis HOM05D003231 ORTHO05D003865 3.4e-11 71.6 79 53.2
Ca_12882_v3 Cicer arietinum L. HOM05D003231 ORTHO05D003865 3.4e-11 71.6 77 51.9
Gohir.A13G181800 Gossypium hirsutum HOM05D003231 ORTHO05D003865 3.4e-11 71.6 91 46.2
Gorai.013G211500 Gossypium raimondii HOM05D003231 ORTHO05D003865 3.4e-11 71.6 82 50.0
Sc19g0005970 Simmondsia chinensis HOM05D003231 ORTHO05D003865 3.4e-11 71.6 79 43.0
THA.LOC104803575 Tarenaya hassleriana HOM05D003231 ORTHO05D003865 3.4e-11 71.6 89 46.1
SalBow6G3063 Salvia bowleyana HOM05D003231 ORTHO05D003865 4.5e-11 71.2 77 51.9
HanXRQChr03g0079191 Helianthus annuus HOM05D003231 ORTHO05D003865 5.9e-11 70.9 89 43.8
C03p88290 Brassica napus HOM05D003231 ORTHO05D003865 7.7e-11 70.5 84 47.6
FAN15G1275 Fragaria x ananassa HOM05D003231 ORTHO05D003865 7.7e-11 70.5 75 49.3
GSVIVG01022781001 Vitis vinifera HOM05D003231 ORTHO05D003865 7.7e-11 70.5 40 72.5
Thhalv10025341m.g Eutrema salsugineum HOM05D003231 ORTHO05D003865 1.0e-10 70.1 90 45.6
SEGI_37153 Sequoiadendron giganteum HOM05D003231 ORTHO05D003865 1.0e-10 70.1 96 44.8
TPR.G12507 Trifolium pratense HOM05D003231 ORTHO05D003865 1.0e-10 70.1 88 45.5
Aqoxy7G04165 Aquilegia oxysepala HOM05D003231 ORTHO05D003865 1.3e-10 69.7 77 46.8
FAN24G1616 Fragaria x ananassa HOM05D003231 ORTHO05D003865 1.7e-10 69.3 73 49.3
Hund19250 Selenicereus undatus HOM05D003231 ORTHO05D003865 1.7e-10 69.3 60 51.7
Aa31LG2G19240 Aethionema arabicum HOM05D003231 ORTHO05D003865 2.2e-10 68.9 31 87.1
arahy.Tifrunner.gnm1.ann1.GT9AC6 Arachis hypogaea HOM05D003231 ORTHO05D003865 2.2e-10 68.9 81 43.2
BcaC01g01114 Brassica carinata HOM05D003231 ORTHO05D003865 2.2e-10 68.9 84 46.4
BolC3t21138H Brassica oleracea HOM05D003231 ORTHO05D003865 2.2e-10 68.9 84 46.4
CARHR117760 Cardamine hirsuta HOM05D003231 ORTHO05D003865 2.2e-10 68.9 72 47.2
Lsat_1_v5_gn_5_127401 Lactuca sativa HOM05D003231 ORTHO05D003865 2.2e-10 68.9 46 67.4
Nn7g37407 Nelumbo nucifera HOM05D003231 ORTHO05D003865 2.2e-10 68.9 90 46.7
Os02g0631000 Oryza sativa ssp. japonica HOM05D003231 ORTHO05D003865 2.2e-10 68.9 63 55.6
Rhsim13G0137200 Rhododendron simsii HOM05D003231 ORTHO05D003865 2.2e-10 68.9 80 48.8
Sed0022904 Sechium edule HOM05D003231 ORTHO05D003865 2.9e-10 68.6 41 63.4
Zm00001eb185310 Zea mays HOM05D003231 ORTHO05D003865 2.9e-10 68.6 43 67.4
EL10Ac3g06791 Beta vulgaris HOM05D003231 ORTHO05D003865 3.8e-10 68.2 74 44.6
MBI18_g03888_MAGBIO Magnolia biondii HOM05D003231 ORTHO05D003865 3.8e-10 68.2 39 71.8
Atru.chr7.2716 Acer truncatum HOM05D003231 ORTHO05D003865 5.0e-10 67.8 77 48.1
ECA234G4150 Erigeron canadensis HOM05D003231 ORTHO05D003865 5.0e-10 67.8 46 63.0
Sopen06g019710 Solanum pennellii HOM05D003231 ORTHO05D003865 5.0e-10 67.8 78 50.0
ClCG05G017420 Citrullus lanatus HOM05D003231 ORTHO05D003865 6.5e-10 67.4 92 40.2
MELO3C003645.2 Cucumis melo HOM05D003231 ORTHO05D003865 6.5e-10 67.4 99 38.4
ECA236G1370 Erigeron canadensis HOM05D003231 ORTHO05D003865 8.5e-10 67.0 83 44.6
FvH4_2g30651 Fragaria vesca HOM05D003231 ORTHO05D003865 8.5e-10 67.0 41 65.9
MBI16_g23305_MAGBIO Magnolia biondii HOM05D003231 ORTHO05D003865 8.5e-10 67.0 80 48.8
HanXRQChr15g0494411 Helianthus annuus HOM05D003231 ORTHO05D003865 1.1e-09 66.6 86 43.0
CDE08G0677 Ceratophyllum demersum HOM05D003231 ORTHO05D000289 1.4e-09 66.2 55 56.4
FAN20G1074 Fragaria x ananassa HOM05D003231 ORTHO05D005838 1.4e-09 66.2 70 45.7
Zm00001eb247840 Zea mays HOM05D003231 ORTHO05D003865 1.4e-09 66.2 70 50.0
Ah.04g153280 Amaranthus hybridus HOM05D003231 ORTHO05D003865 1.9e-09 65.9 84 41.7
CsaV3_3G046920 Cucumis sativus L. HOM05D003231 ORTHO05D003865 2.5e-09 65.5 92 39.1
HanXRQChr10g0304871 Helianthus annuus HOM05D003231 ORTHO05D003865 2.5e-09 65.5 46 60.9
Solyc06g054650.3 Solanum lycopersicum HOM05D003231 ORTHO05D003865 2.5e-09 65.5 78 48.7
THA.LOC104819916 Tarenaya hassleriana HOM05D003231 ORTHO05D003865 2.5e-09 65.5 32 78.1
Lalb_Chr14g0362171 Lupinus albus HOM05D003231 ORTHO05D003865 3.2e-09 65.1 72 48.6
Sc13g0002750 Simmondsia chinensis HOM05D003231 ORTHO05D003865 3.2e-09 65.1 74 44.6
unitig_748.g7169 Utricularia gibba HOM05D003231 ORTHO05D003865 5.5e-09 64.3 65 49.2
ECA240G4580 Erigeron canadensis HOM05D003231 ORTHO05D003865 9.4e-09 63.5 95 42.1
AL4G14680 Arabidopsis lyrata HOM05D003231 ORTHO05D003865 1.2e-08 63.2 72 45.8
AUR62032666 Chenopodium quinoa HOM05D003231 ORTHO05D003865 1.2e-08 63.2 93 38.7
Mapoly0023s0021 Marchantia polymorpha HOM05D003231 ORTHO05D003865 1.2e-08 63.2 77 48.1
Lsat_1_v5_gn_7_103361 Lactuca sativa HOM05D003231 ORTHO05D003865 1.6e-08 62.8 52 55.8
Os04g0672900 Oryza sativa ssp. japonica HOM05D003231 ORTHO05D003865 1.6e-08 62.8 77 46.8
Aa31LG7G12420 Aethionema arabicum HOM05D003231 ORTHO05D003865 2.1e-08 62.4 73 49.3
AUR62035301 Chenopodium quinoa HOM05D003231 ORTHO05D003865 2.1e-08 62.4 41 58.5
HanXRQChr17g0548841 Helianthus annuus HOM05D003231 ORTHO05D003865 2.1e-08 62.4 44 61.4
PSO447G0312 Papaver somniferum HOM05D003231 ORTHO05D003865 2.1e-08 62.4 89 44.9
PSO210G3455 Papaver somniferum HOM05D003231 ORTHO05D003865 2.7e-08 62.0 85 45.9
Hund24844 Selenicereus undatus HOM05D003231 ORTHO05D003865 3.6e-08 61.6 60 46.7
HPP92_002548 Vanilla planifolia HOM05D003231 ORTHO05D003865 6.1e-08 60.8 44 59.1
HanXRQChr13g0388911 Helianthus annuus HOM05D003231 ORTHO05D003865 1.8e-07 59.3 44 61.4
AagrBONN_evm.TU.Sc2ySwM_117.2658 Anthoceros agrestis HOM05D003231 ORTHO05D003865 2.3e-07 58.9 30 76.7
ATR0693G374 Amborella trichopoda HOM05D003231 ORTHO05D003865 3.0e-07 58.5 82 36.6
Lsat_1_v5_gn_9_99280 Lactuca sativa HOM05D003231 ORTHO05D003865 3.0e-07 58.5 30 73.3
HPP92_008558 Vanilla planifolia HOM05D003231 ORTHO05D003865 1.5e-06 56.2 34 64.7


User provided reference genes

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