Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 3.8e-114 414.8 210 100.0
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 5.2e-63 245.0 200 62.0
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 1.9e-60 236.5 200 61.5
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 7.8e-59 231.1 200 57.0
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 1.3e-56 223.8 200 55.5
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 1.3e-56 223.8 200 58.0
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 2.1e-56 223.0 201 53.7
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 4.8e-56 221.9 201 56.7
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 1.4e-55 220.3 200 56.5
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 4.0e-55 218.8 200 55.5
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 4.0e-55 218.8 200 54.0
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 6.9e-55 218.0 200 55.5
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 1.2e-54 217.2 200 55.5
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 1.5e-54 216.9 200 54.0
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 9.9e-54 214.2 200 53.5
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 1.7e-53 213.4 201 54.7
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 4.2e-52 208.8 201 52.7
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 2.1e-51 206.5 201 52.2
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 1.3e-50 203.8 191 54.5
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 8.7e-50 201.1 200 52.5
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 1.6e-48 196.8 198 49.5
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 2.1e-48 196.4 200 49.5
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 3.6e-48 195.7 201 50.7
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 8.1e-48 194.5 201 47.8
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 5.3e-47 191.8 201 47.3
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 6.9e-47 191.4 200 48.0
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 6.9e-47 191.4 201 50.2
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 2.0e-46 189.9 197 47.2
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 3.4e-46 189.1 200 49.5
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 7.6e-46 188.0 201 49.3
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 1.7e-45 186.8 188 51.6
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 4.9e-45 185.3 199 47.7
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 8.4e-45 184.5 198 49.5
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 8.4e-45 184.5 200 47.5
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.4e-44 183.7 197 48.7
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 2.4e-44 183.0 208 48.1
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 3.2e-44 182.6 184 47.8
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 4.2e-44 182.2 189 49.7
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 5.4e-44 181.8 201 45.3
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 5.4e-44 181.8 201 46.8
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 7.1e-44 181.4 201 44.3
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 7.1e-44 181.4 199 50.3
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 7.1e-44 181.4 201 46.8
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 1.6e-43 180.3 198 45.5
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.7e-43 179.5 201 46.8
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 2.7e-43 179.5 201 47.3
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 3.5e-43 179.1 201 46.3
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.5e-43 179.1 201 46.8
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.0e-42 177.6 188 49.5
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 2.3e-42 176.4 203 46.8
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 3.9e-42 175.6 201 45.8
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 5.1e-42 175.3 205 43.4
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 8.7e-42 174.5 201 44.3
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 8.7e-42 174.5 201 46.3
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 1.1e-41 174.1 197 45.2
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 1.1e-41 174.1 200 45.0
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.5e-41 173.7 188 51.1
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 1.5e-41 173.7 204 44.6
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 5.6e-41 171.8 202 43.1
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 9.6e-41 171.0 166 52.4
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 9.6e-41 171.0 200 46.0
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 2.8e-40 169.5 205 42.0
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 8.1e-40 167.9 201 42.3
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 1.1e-39 167.5 199 44.2
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.1e-39 166.0 186 44.6
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.1e-39 166.0 185 43.8
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 6.9e-39 164.9 187 46.0
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 6.9e-39 164.9 201 42.3
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 6.9e-39 164.9 201 41.3
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 6.9e-39 164.9 201 42.3
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 6.9e-39 164.9 201 41.3
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 9.0e-39 164.5 201 42.3
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 9.0e-39 164.5 197 44.7
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 1.5e-38 163.7 224 42.0
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 3.3e-33 146.0 209 37.8
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.3e-32 144.1 175 44.0
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 2.8e-32 142.9 197 43.7
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 2.4e-31 139.8 250 33.2
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 1.5e-30 137.1 126 50.8
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 1.5e-30 137.1 197 42.1
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.2e-29 133.3 202 37.1
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 8.4e-29 131.3 202 37.1
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 8.4e-29 131.3 168 41.7
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 1.9e-28 130.2 203 36.9
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 3.2e-28 129.4 202 36.6
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 7.1e-28 128.3 213 34.7
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 7.1e-28 128.3 147 45.6
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 9.3e-28 127.9 132 52.3
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 1.6e-27 127.1 202 35.6
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 2.5e-25 119.8 200 34.5
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 1.3e-24 117.5 202 35.1
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 2.2e-24 116.7 132 47.0
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 8.2e-24 114.8 130 44.6
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 1.5e-22 110.5 157 40.1
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 5.9e-22 108.6 131 39.7
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 2.9e-21 106.3 95 58.9
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 8.5e-21 104.8 199 34.2
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.7e-16 90.5 186 31.2
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 2.1e-11 73.6 72 48.6
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 6.1e-11 72.0 89 47.2
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.5e-09 67.4 71 47.9
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 2.8e-08 63.2 69 43.5
Peaxi162Scf00289g00039 Petunia axillaris HOM05D007471 ORTHO05D009481 6.3e-08 62.0 57 49.1


User provided reference genes

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