Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 5.0e-148 527.7 257 100.0
Oeu006225.1 Olea europaea HOM05D002626 ORTHO05D002749 3.4e-24 116.3 68 88.2
Oeu027127.1 Olea europaea HOM05D002626 ORTHO05D002749 3.4e-24 116.3 68 88.2
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 4.7e-13 79.3 96 49.0
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.4e-12 77.8 75 56.0
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 3.0e-12 76.6 93 52.7
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 6.7e-12 75.5 73 56.2
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 1.1e-11 74.7 72 54.2
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.5e-11 74.3 89 49.4
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 2.6e-11 73.6 70 52.9
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.3e-11 73.2 89 48.3
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 4.4e-11 72.8 72 54.2
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 7.4e-11 72.0 72 52.8
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 7.4e-11 72.0 90 48.9
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 2.2e-10 70.5 72 50.0
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 2.8e-10 70.1 73 54.8
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 2.8e-10 70.1 70 52.9
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 2.8e-10 70.1 70 52.9
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 4.8e-10 69.3 72 54.2
Oeu047888.1 Olea europaea HOM05D002626 ORTHO05D002749 6.3e-10 68.9 72 61.1
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 8.2e-10 68.6 89 47.2
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 8.2e-10 68.6 72 54.2
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.4e-09 67.8 89 46.1
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.8e-09 67.4 88 47.7
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.8e-09 67.4 88 47.7
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.8e-09 67.4 88 47.7
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.8e-09 67.4 88 44.3
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 2.4e-09 67.0 95 46.3
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 2.4e-09 67.0 76 44.7
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.4e-09 67.0 73 54.8
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.4e-09 67.0 70 50.0
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.1e-09 66.6 69 49.3
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 3.1e-09 66.6 67 59.7
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 4.1e-09 66.2 88 47.7
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 4.1e-09 66.2 88 47.7
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 4.1e-09 66.2 72 48.6
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 4.1e-09 66.2 93 44.1
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 4.1e-09 66.2 88 45.5
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 5.3e-09 65.9 95 42.1
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 5.3e-09 65.9 76 46.1
Oeu053056.1 Olea europaea HOM05D028607 ORTHO05D009043 5.3e-09 65.9 74 52.7
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 7.0e-09 65.5 90 47.8
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 7.0e-09 65.5 72 50.0
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 7.0e-09 65.5 94 45.7
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 9.1e-09 65.1 73 47.9
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.2e-08 64.7 72 51.4
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.2e-08 64.7 90 46.7
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 1.2e-08 64.7 70 52.9
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.2e-08 64.7 88 45.5
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.2e-08 64.7 89 42.7
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 1.6e-08 64.3 90 47.8
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.6e-08 64.3 88 45.5
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 1.6e-08 64.3 72 48.6
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 2.0e-08 63.9 70 45.7
Oeu020817.1 Olea europaea HOM05D028607 ORTHO05D009043 2.0e-08 63.9 53 64.2
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 2.6e-08 63.5 91 45.1
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.6e-08 63.5 95 40.0
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 4.5e-08 62.8 70 45.7
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 4.5e-08 62.8 95 40.0
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.5e-08 62.8 95 40.0
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 4.5e-08 62.8 72 47.2
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 4.5e-08 62.8 73 52.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 5.9e-08 62.4 73 47.9
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 5.9e-08 62.4 63 58.7
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 7.7e-08 62.0 97 46.4
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 7.7e-08 62.0 72 45.8
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.0e-07 61.6 55 60.0
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.3e-07 61.2 70 47.1
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.3e-07 61.2 72 45.8
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.3e-07 61.2 82 46.3
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.7e-07 60.8 89 44.9
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.7e-07 60.8 96 40.6
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 2.2e-07 60.5 55 58.2
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 2.2e-07 60.5 87 43.7
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.9e-07 60.1 56 58.9
Oeu063661.1 Olea europaea HOM05D010728 ORTHO05D002749 5.0e-07 59.3 59 57.6
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 8.5e-07 58.5 83 42.2
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.5e-06 57.8 64 50.0
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.5e-06 57.8 70 45.7
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.5e-06 57.8 83 41.0
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.9e-06 57.4 89 39.3
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 2.5e-06 57.0 66 45.5
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 3.2e-06 56.6 88 43.2
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 3.2e-06 56.6 70 44.3
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 5.5e-06 55.8 69 46.4
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 5.5e-06 55.8 82 40.2
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 5.5e-06 55.8 93 40.9
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 5.5e-06 55.8 72 43.1
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 5.5e-06 55.8 64 46.9
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 9.4e-06 55.1 94 42.6
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 9.4e-06 55.1 83 39.8


User provided reference genes

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