Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 3.4e-74 281.6 140 100.0
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 1.9e-24 116.3 69 87.0
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 3.2e-24 115.5 70 82.9
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 4.2e-24 115.2 69 85.5
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 4.2e-24 115.2 69 85.5
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 4.2e-24 115.2 69 85.5
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 9.3e-24 114.0 69 82.6
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 1.2e-23 113.6 69 82.6
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.2e-23 113.6 69 84.1
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.2e-23 113.6 69 84.1
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 1.2e-23 113.6 69 84.1
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.2e-23 113.6 69 84.1
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 1.6e-23 113.2 68 86.8
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 1.6e-23 113.2 69 81.2
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 2.1e-23 112.8 69 84.1
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 2.7e-23 112.5 69 82.6
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 3.5e-23 112.1 69 81.2
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 3.5e-23 112.1 69 81.2
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 4.6e-23 111.7 69 82.6
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 6.0e-23 111.3 69 82.6
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 6.0e-23 111.3 69 82.6
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 7.9e-23 110.9 69 79.7
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 7.9e-23 110.9 69 82.6
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 1.3e-22 110.2 69 81.2
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 1.3e-22 110.2 69 78.3
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.3e-22 110.2 69 81.2
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.3e-22 110.2 69 81.2
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 1.3e-22 110.2 69 81.2
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 1.3e-22 110.2 69 81.2
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.8e-22 109.8 69 81.2
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 3.0e-22 109.0 69 79.7
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 3.0e-22 109.0 70 77.1
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 3.0e-22 109.0 69 79.7
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 3.9e-22 108.6 69 79.7
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 3.9e-22 108.6 69 78.3
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.9e-22 108.6 69 79.7
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 3.9e-22 108.6 69 79.7
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 3.9e-22 108.6 69 81.2
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 3.9e-22 108.6 69 78.3
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 5.1e-22 108.2 69 81.2
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 5.1e-22 108.2 66 84.8
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 6.7e-22 107.8 66 83.3
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.7e-22 107.8 66 83.3
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.7e-22 107.8 66 83.3
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 8.7e-22 107.5 66 80.3
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 8.7e-22 107.5 69 78.3
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 8.7e-22 107.5 69 78.3
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.1e-21 107.1 66 80.3
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 1.1e-21 107.1 66 80.3
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 1.1e-21 107.1 69 79.7
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.9e-21 106.3 69 78.3
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.9e-21 106.3 69 78.3
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 1.9e-21 106.3 69 79.7
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.9e-21 106.3 66 81.8
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.5e-21 105.9 69 76.8
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 2.5e-21 105.9 70 75.7
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 2.5e-21 105.9 69 76.8
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 2.5e-21 105.9 69 76.8
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 3.3e-21 105.5 69 76.8
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 3.3e-21 105.5 91 64.8
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 4.3e-21 105.1 69 76.8
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 5.6e-21 104.8 66 78.8
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 7.4e-21 104.4 69 75.4
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 9.6e-21 104.0 69 76.8
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 1.3e-20 103.6 64 81.2
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 1.6e-20 103.2 66 78.8
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 1.6e-20 103.2 69 73.9
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 1.6e-20 103.2 66 78.8
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 1.6e-20 103.2 69 73.9
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.1e-20 102.8 66 78.8
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 2.8e-20 102.4 66 78.8
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 2.8e-20 102.4 69 72.5
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 3.7e-20 102.1 69 72.5
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 8.1e-20 100.9 66 77.3
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 8.1e-20 100.9 66 77.3
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 1.1e-19 100.5 69 71.0
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.1e-19 100.5 69 72.5
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.1e-19 100.5 94 57.4
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.4e-19 100.1 69 71.0
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 2.4e-19 99.4 66 75.8
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 2.4e-19 99.4 66 75.8
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 2.4e-19 99.4 66 75.8
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 2.4e-19 99.4 66 75.8
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 2.4e-19 99.4 66 75.8
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 2.4e-19 99.4 66 75.8
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 2.4e-19 99.4 66 75.8
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.4e-19 99.4 66 74.2
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 3.1e-19 99.0 66 75.8
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 3.1e-19 99.0 66 75.8
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 3.1e-19 99.0 66 75.8
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 3.1e-19 99.0 69 71.0
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 3.1e-19 99.0 66 75.8
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 3.1e-19 99.0 65 73.8
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 5.3e-19 98.2 66 74.2
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 5.3e-19 98.2 69 71.0
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 5.3e-19 98.2 66 72.7
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 6.9e-19 97.8 66 74.2
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 6.9e-19 97.8 69 72.5
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 6.9e-19 97.8 69 72.5
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.0e-19 97.4 69 68.1
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.0e-19 97.4 69 68.1
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 9.0e-19 97.4 70 67.1
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 9.0e-19 97.4 73 64.4
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 1.2e-18 97.1 66 72.7
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 2.0e-18 96.3 69 69.6
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 2.0e-18 96.3 63 76.2
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 2.6e-18 95.9 71 69.0
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 2.6e-18 95.9 70 65.7
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 3.4e-18 95.5 70 67.1
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 4.5e-18 95.1 64 70.3
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 5.8e-18 94.7 69 68.1
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 7.6e-18 94.4 71 64.8
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 7.6e-18 94.4 69 63.8
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 2.9e-17 92.4 66 69.7
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 2.9e-17 92.4 66 69.7
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 2.9e-17 92.4 71 63.4
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 3.2e-16 89.0 69 63.8
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.2e-15 87.0 69 59.4
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 4.6e-15 85.1 66 63.6
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 8.7e-14 80.9 71 59.2
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 2.8e-12 75.9 91 48.4
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 6.3e-12 74.7 86 48.8
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.1e-11 73.9 59 72.9
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 1.5e-10 70.1 64 54.7
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 6.5e-09 64.7 58 53.4
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 8.5e-09 64.3 42 78.6
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.4e-08 63.5 60 50.0
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.7e-07 59.3 39 82.1
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 3.6e-07 58.9 40 77.5
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 4.6e-07 58.5 52 48.1


User provided reference genes

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