Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000377.2 Olea europaea HOM05D005476 ORTHO05D006886 1.7e-137 492.7 247 100.0
Oeu013433.3 Olea europaea HOM05D005476 ORTHO05D006886 2.6e-114 415.6 259 81.5
SGA_v2.0_scaffold146G36140 Striga asiatica HOM05D005476 ORTHO05D006886 2.0e-85 319.7 280 59.6
Migut.N00789 Erythranthe guttata HOM05D005476 ORTHO05D006886 5.7e-85 318.2 276 62.0
Dinv14437 Davidia involucrata HOM05D005476 ORTHO05D006886 8.3e-84 314.3 262 63.7
CAN.G394.127 Capsicum annuum HOM05D005476 ORTHO05D006886 5.4e-83 311.6 260 64.6
Nitab4.5_0001806g0030 Nicotiana tabacum HOM05D005476 ORTHO05D006886 9.1e-83 310.8 259 64.9
vmacro02961 Vaccinium macrocarpon HOM05D005476 ORTHO05D006886 1.6e-82 310.1 261 63.6
SGA_v2.0_scaffold120G32912 Striga asiatica HOM05D005476 ORTHO05D006886 2.0e-82 309.7 280 58.2
Solyc06g076950.3 Solanum lycopersicum HOM05D005476 ORTHO05D006886 7.7e-82 307.8 259 62.9
Sopen06g033350 Solanum pennellii HOM05D005476 ORTHO05D006886 7.7e-82 307.8 259 62.9
GSVIVG01024740001 Vitis vinifera HOM05D005476 ORTHO05D006886 1.0e-81 307.4 242 65.3
Nitab4.5_0000010g0290 Nicotiana tabacum HOM05D005476 ORTHO05D006886 1.3e-81 307.0 259 64.1
PGSC0003DMG400030356 Solanum tuberosum HOM05D005476 ORTHO05D006886 3.8e-81 305.4 259 62.5
Dinv28640 Davidia involucrata HOM05D005476 ORTHO05D006886 1.9e-80 303.1 262 62.2
Peaxi162Scf00540g00426 Petunia axillaris HOM05D005476 ORTHO05D006886 5.5e-80 301.6 260 64.2
TAR633G0563 Trochodendron aralioides HOM05D005476 ORTHO05D006886 1.2e-79 300.4 262 60.7
Aqoxy2G00901 Aquilegia oxysepala HOM05D005476 ORTHO05D006886 6.1e-79 298.1 263 62.4
DCAR_007375 Daucus carota HOM05D005476 ORTHO05D006886 1.0e-78 297.4 259 61.8
TAR636G1181 Trochodendron aralioides HOM05D005476 ORTHO05D006886 1.4e-78 297.0 262 59.5
CSS0011477 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 4.0e-78 295.4 262 60.7
Cc01_g14180 Coffea canephora HOM05D005476 ORTHO05D006886 5.2e-78 295.0 279 56.6
CSS0028478 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 6.8e-78 294.7 262 60.3
SalBow2G2575 Salvia bowleyana HOM05D005476 ORTHO05D006886 6.8e-78 294.7 280 57.5
SalBow5G1841 Salvia bowleyana HOM05D005476 ORTHO05D006886 8.9e-78 294.3 280 57.1
Nn2g11493 Nelumbo nucifera HOM05D005476 ORTHO05D006886 1.2e-77 293.9 257 60.3
Rhsim13G0069500 Rhododendron simsii HOM05D005476 ORTHO05D006886 3.4e-77 292.4 264 58.3
RcHm_v2.0_Chr5g0069451 Rosa chinensis HOM05D005476 ORTHO05D006886 3.4e-77 292.4 262 59.5
Nn2g13708 Nelumbo nucifera HOM05D005476 ORTHO05D006886 4.4e-77 292.0 262 58.0
unitig_8.g3687 Utricularia gibba HOM05D005476 ORTHO05D006886 4.4e-77 292.0 260 57.3
PSO801G0319 Papaver somniferum HOM05D005476 ORTHO05D006886 3.7e-76 288.9 264 59.1
unitig_22.g5210 Utricularia gibba HOM05D005476 ORTHO05D006886 8.3e-76 287.7 261 57.1
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 1.1e-75 287.3 259 59.1
CANSAT25G3760 Cannabis sativa HOM05D005476 ORTHO05D006886 1.4e-75 287.0 262 58.0
PSO339G1712 Papaver somniferum HOM05D005476 ORTHO05D006886 1.4e-75 287.0 264 58.7
Haze_24322 Corylus avellana HOM05D005476 ORTHO05D006886 4.1e-75 285.4 259 58.3
Potri.009G046200 Populus trichocarpa HOM05D005476 ORTHO05D006886 4.1e-75 285.4 262 59.5
FAN21G0574 Fragaria x ananassa HOM05D005476 ORTHO05D006886 7.0e-75 284.6 262 58.4
FAN16G3667 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.6e-74 283.5 262 58.4
FvH4_3g38550 Fragaria vesca HOM05D005476 ORTHO05D006886 2.7e-74 282.7 262 58.4
Prupe.6G057500 Prunus persica HOM05D005476 ORTHO05D006886 5.9e-74 281.6 262 57.3
FAN25G3001 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.0e-73 280.8 262 57.6
FAN11G1091 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.3e-73 280.4 262 58.0
Lsat_1_v5_gn_9_20101 Lactuca sativa HOM05D005476 ORTHO05D006886 1.3e-73 280.4 265 58.5
MD11G1074700 Malus domestica HOM05D005476 ORTHO05D006886 2.3e-73 279.6 262 58.0
CiPaw.14G059600 Carya illinoinensis HOM05D005476 ORTHO05D006886 2.9e-73 279.3 262 56.9
Hund18848 Selenicereus undatus HOM05D005476 ORTHO05D006886 5.0e-73 278.5 266 59.0
Cpa.g.sc415.4 Carica papaya HOM05D005476 ORTHO05D006886 6.6e-73 278.1 263 57.0
CiPaw.13G077600 Carya illinoinensis HOM05D005476 ORTHO05D006886 8.6e-73 277.7 262 56.9
Sabra09G0033300 Salix brachista HOM05D005476 ORTHO05D006886 8.6e-73 277.7 262 58.8
Eucgr.B02253 Eucalyptus grandis HOM05D005476 ORTHO05D006886 3.3e-72 275.8 263 56.3
TWI79G0899 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 1.2e-71 273.9 264 58.3
BraA10t43679Z Brassica rapa HOM05D005476 ORTHO05D006886 1.6e-71 273.5 259 56.4
MD03G1070700 Malus domestica HOM05D005476 ORTHO05D006886 2.8e-71 272.7 262 56.9
A10p15540 Brassica napus HOM05D005476 ORTHO05D006886 4.7e-71 271.9 259 56.4
ECA247G2000 Erigeron canadensis HOM05D005476 ORTHO05D006886 6.1e-71 271.6 269 56.9
THA.LOC104810712 Tarenaya hassleriana HOM05D005476 ORTHO05D006886 8.0e-71 271.2 262 56.9
Thecc.09G301800 Theobroma cacao HOM05D005476 ORTHO05D006886 1.8e-70 270.0 262 56.5
TWI31G0160 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 3.1e-70 269.2 264 58.0
AT5G58730 Arabidopsis thaliana HOM05D005476 ORTHO05D006886 5.2e-70 268.5 262 56.1
Potri.001G251500 Populus trichocarpa HOM05D005476 ORTHO05D006886 5.2e-70 268.5 262 55.0
Gorai.006G106700 Gossypium raimondii HOM05D005476 ORTHO05D006886 8.9e-70 267.7 262 56.5
Carub.0008s1935 Capsella rubella HOM05D005476 ORTHO05D006886 1.2e-69 267.3 259 54.8
CDE04G1962 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.2e-69 267.3 265 54.7
Manes.01G161600 Manihot esculenta HOM05D005476 ORTHO05D006886 1.2e-69 267.3 262 56.1
COL.COLO4_19157 Corchorus olitorius HOM05D005476 ORTHO05D006886 1.5e-69 266.9 262 56.5
Thhalv10014005m.g Eutrema salsugineum HOM05D005476 ORTHO05D006886 1.5e-69 266.9 259 55.6
Manes.02G119400 Manihot esculenta HOM05D005476 ORTHO05D006886 1.5e-69 266.9 262 55.3
Ciclev10028681m.g Citrus clementina HOM05D005476 ORTHO05D006886 3.4e-69 265.8 262 55.0
Gohir.A09G090300 Gossypium hirsutum HOM05D005476 ORTHO05D006886 4.4e-69 265.4 262 56.1
C09p50810 Brassica napus HOM05D005476 ORTHO05D006886 9.8e-69 264.2 259 56.0
Gohir.D09G090400 Gossypium hirsutum HOM05D005476 ORTHO05D006886 9.8e-69 264.2 262 56.1
Aa31LG11G490 Aethionema arabicum HOM05D005476 ORTHO05D006886 2.2e-68 263.1 262 55.3
Ah.08g221180 Amaranthus hybridus HOM05D005476 ORTHO05D006886 2.2e-68 263.1 268 54.5
AL8G35010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 2.9e-68 262.7 262 54.6
MBI14_g42907_MAGBIO Magnolia biondii HOM05D005476 ORTHO05D006886 4.9e-68 261.9 263 55.1
QL01p038276 Quercus lobata HOM05D005476 ORTHO05D006886 4.9e-68 261.9 263 55.9
Atru.chr3.4220 Acer truncatum HOM05D005476 ORTHO05D006886 6.4e-68 261.5 264 54.2
BolC9t57941H Brassica oleracea HOM05D005476 ORTHO05D006886 8.3e-68 261.2 259 55.6
Duzib168G1303 Durio zibethinus HOM05D005476 ORTHO05D006886 8.3e-68 261.2 262 54.6
SalBow8G4850 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.9e-67 260.0 280 52.9
CARHR272640 Cardamine hirsuta HOM05D005476 ORTHO05D006886 2.4e-67 259.6 263 54.4
EL10Ac7g16167 Beta vulgaris HOM05D005476 ORTHO05D006886 4.1e-67 258.8 271 53.1
HanXRQChr04g0109161 Helianthus annuus HOM05D005476 ORTHO05D006886 4.1e-67 258.8 266 54.1
ClCG03G000760 Citrullus lanatus HOM05D005476 ORTHO05D006886 7.0e-67 258.1 262 54.2
Sp6g20420 Schrenkiella parvula HOM05D005476 ORTHO05D006886 7.0e-67 258.1 262 53.4
Duzib170G1024 Durio zibethinus HOM05D005476 ORTHO05D006886 2.0e-66 256.5 275 53.1
Sc06g0008450 Simmondsia chinensis HOM05D005476 ORTHO05D006886 2.0e-66 256.5 264 54.9
MELO3C020550.2 Cucumis melo HOM05D005476 ORTHO05D006886 2.7e-66 256.1 262 54.2
HPP92_002247 Vanilla planifolia HOM05D005476 ORTHO05D006886 1.3e-65 253.8 260 52.7
AUR62001646 Chenopodium quinoa HOM05D005476 ORTHO05D006886 1.7e-65 253.4 271 53.9
PGR102G2402 Punica granatum HOM05D005476 ORTHO05D006886 3.0e-65 252.7 258 55.0
Sed0016907 Sechium edule HOM05D005476 ORTHO05D006886 3.0e-65 252.7 262 53.1
AUR62020130 Chenopodium quinoa HOM05D005476 ORTHO05D006886 3.9e-65 252.3 271 53.5
CsaV3_1G036180 Cucumis sativus L. HOM05D005476 ORTHO05D006886 3.9e-65 252.3 263 53.2
Sed0014418 Sechium edule HOM05D005476 ORTHO05D006886 3.3e-64 249.2 262 51.5
Lalb_Chr17g0345081 Lupinus albus HOM05D005476 ORTHO05D006886 5.6e-64 248.4 266 53.4
Medtr5g070350 Medicago truncatula HOM05D005476 ORTHO05D006886 3.6e-63 245.7 261 51.3
BcaC04g19834 Brassica carinata HOM05D005476 ORTHO05D006886 4.7e-63 245.4 259 54.4
LjContig00155g0002690 Lotus japonicus HOM05D005476 ORTHO05D006886 3.1e-62 242.7 261 52.5
Psat2g058600 Pisum sativum HOM05D005476 ORTHO05D006886 1.2e-61 240.7 264 51.1
Glyma.14G193500 Glycine max HOM05D005476 ORTHO05D006886 3.4e-61 239.2 262 51.5
Glyma.02G226600 Glycine max HOM05D005476 ORTHO05D006886 3.7e-60 235.7 261 50.6
TPR.G5779 Trifolium pratense HOM05D005476 ORTHO05D006886 4.9e-60 235.3 264 49.6
SHI19142 Sapria himalayana HOM05D005476 ORTHO05D006886 1.9e-59 233.4 263 51.3
arahy.Tifrunner.gnm1.ann1.Q06W8H Arachis hypogaea HOM05D005476 ORTHO05D006886 2.4e-59 233.0 276 50.7
Lj1A137G45 Lonicera japonica HOM05D005476 ORTHO05D006886 4.1e-59 232.3 239 55.6
VMungo0647G0678 Vigna mungo HOM05D005476 ORTHO05D006886 4.1e-59 232.3 261 50.6
Ca_05598_v3 Cicer arietinum L. HOM05D005476 ORTHO05D006886 1.0e-57 227.6 264 49.6
Phvul.008G261400 Phaseolus vulgaris HOM05D005476 ORTHO05D006886 1.7e-57 226.9 258 50.4
ATR0618G050 Amborella trichopoda HOM05D005476 ORTHO05D006886 3.9e-57 225.7 267 47.9
CDE02G0680 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.1e-56 224.2 265 48.7
Os03g0737701 Oryza sativa ssp. japonica HOM05D005476 ORTHO05D006886 1.8e-54 216.9 267 48.3
Zm00001eb056490 Zea mays HOM05D005476 ORTHO05D006886 4.9e-52 208.8 276 46.0
SEGI_26423 Sequoiadendron giganteum HOM05D005476 ORTHO05D006886 6.2e-47 191.8 254 46.5
Pp3c7_18020 Physcomitrium patens HOM05D005476 ORTHO05D006886 3.8e-44 182.6 251 43.0
Pp3c1_3930 Physcomitrium patens HOM05D005476 ORTHO05D006886 5.4e-43 178.7 261 42.1
AagrBONN_evm.TU.Sc2ySwM_362.363 Anthoceros agrestis HOM05D005476 ORTHO05D006886 2.1e-42 176.8 260 41.9
SMO329G0019 Selaginella moellendorffii HOM05D005476 ORTHO05D006886 2.3e-41 173.3 257 40.9
Mapoly0060s0007 Marchantia polymorpha HOM05D005476 ORTHO05D006886 1.5e-40 170.6 256 40.2
arahy.Tifrunner.gnm1.ann1.70CJD0 Arachis hypogaea HOM05D005476 ORTHO05D006886 5.6e-40 168.7 143 61.5
AL1010U10010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 2.9e-36 156.4 176 50.0
CBR_g23861 Chara braunii HOM05D005476 ORTHO05D006886 5.4e-35 152.1 250 38.0
A03p12050 Brassica napus HOM05D005476 ORTHO05D006886 1.9e-32 143.7 131 58.0
Gohir.D05G089750 Gossypium hirsutum HOM05D005476 ORTHO05D006886 4.3e-32 142.5 142 53.5
HanXRQChr16g0507541 Helianthus annuus HOM05D005476 ORTHO05D006886 1.3e-23 114.4 88 62.5
RcHm_v2.0_Chr6g0276161 Rosa chinensis HOM05D005476 ORTHO05D006886 7.4e-16 88.6 102 48.0
RcHm_v2.0_Chr7g0201761 Rosa chinensis HOM05D005476 ORTHO05D006886 1.6e-15 87.4 96 49.0
BraA03t10517Z Brassica rapa HOM05D005476 ORTHO05D006886 5.3e-14 82.4 61 72.1
Actinidia23243 Actinidia chinensis HOM05D005476 ORTHO05D006886 2.6e-13 80.1 62 69.4
C03p15890 Brassica napus HOM05D000062 ORTHO05D021669 7.2e-11 72.0 59 64.4
BolC3t14020H Brassica oleracea HOM05D000062 ORTHO05D006886 7.2e-11 72.0 59 64.4
SalBow5G5594 Salvia bowleyana HOM05D005476 ORTHO05D006886 5.7e-08 62.4 64 54.7
SalBow8G2493 Salvia bowleyana HOM05D005476 ORTHO05D006886 8.2e-07 58.5 138 37.0
arahy.Tifrunner.gnm1.ann1.Y3WSKM Arachis hypogaea HOM05D005476 ORTHO05D006886 1.4e-06 57.8 71 47.9


User provided reference genes

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