Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000239.1 Olea europaea HOM05D003662 ORTHO05D001824 5.8e-294 1013.4 502 100.0
Oeu000241.1 Olea europaea HOM05D003662 ORTHO05D001824 3.3e-212 741.9 420 89.8
Oeu019219.1 Olea europaea HOM05D003662 ORTHO05D001824 4.1e-122 442.6 434 58.8
Oeu026157.1 Olea europaea HOM05D003662 ORTHO05D001824 6.4e-99 365.5 604 42.1
Oeu011776.1 Olea europaea HOM05D003662 ORTHO05D001824 1.9e-98 364.0 581 42.2
Dinv24197 Davidia involucrata HOM05D003662 ORTHO05D001824 5.4e-90 335.9 629 37.5
Dinv09038 Davidia involucrata HOM05D003662 ORTHO05D001824 7.3e-87 325.5 654 37.9
Peaxi162Scf00152g01016 Petunia axillaris HOM05D003662 ORTHO05D001824 6.4e-75 285.8 599 37.1
Migut.B00615 Erythranthe guttata HOM05D003662 ORTHO05D001824 1.1e-74 285.0 595 36.3
Cc02_g21620 Coffea canephora HOM05D003662 ORTHO05D001824 1.4e-74 284.6 651 35.2
Lj5A240T38 Lonicera japonica HOM05D003662 ORTHO05D001824 4.2e-74 283.1 622 36.0
Oeu007958.1 Olea europaea HOM05D003662 ORTHO05D001824 5.4e-74 282.7 543 39.2
CSS0002395 Camellia sinensis var. sinensis HOM05D003662 ORTHO05D001824 2.3e-72 277.3 544 38.2
Hma1.2p1_0704F.1_g206720 Hydrangea macrophylla HOM05D003662 ORTHO05D001824 3.1e-69 266.9 610 34.8
PGSC0003DMG400012562 Solanum tuberosum HOM05D003662 ORTHO05D001824 9.0e-69 265.4 609 35.5
Lj9A354G33 Lonicera japonica HOM05D003662 ORTHO05D001824 1.5e-68 264.6 594 35.2
Sopen01g047650 Solanum pennellii HOM05D003662 ORTHO05D001824 1.7e-67 261.2 611 35.2
vmacro01822 Vaccinium macrocarpon HOM05D003662 ORTHO05D001824 3.8e-67 260.0 611 35.7
CSS0012064 Camellia sinensis var. sinensis HOM05D003662 ORTHO05D001824 1.9e-66 257.7 651 32.4
MSTRG.16578 Avicennia marina HOM05D003662 ORTHO05D001824 3.2e-66 256.9 594 36.4
Peaxi162Scf00001g00023 Petunia axillaris HOM05D003662 ORTHO05D001824 3.2e-66 256.9 622 34.4
Solyc01g105120.4 Solanum lycopersicum HOM05D003662 ORTHO05D001824 3.2e-66 256.9 610 34.6
PGSC0003DMG400011508 Solanum tuberosum HOM05D003662 ORTHO05D001824 1.2e-65 255.0 473 39.1
CAN.G523.76 Capsicum annuum HOM05D003662 ORTHO05D001824 5.1e-64 249.6 611 34.0
Rhsim11G0136400 Rhododendron simsii HOM05D003662 ORTHO05D001824 6.6e-64 249.2 599 34.9
SGA_v2.0_scaffold83G26297 Striga asiatica HOM05D003662 ORTHO05D001824 3.3e-63 246.9 589 34.8
Haze_10685 Corylus avellana HOM05D003662 ORTHO05D001824 4.8e-62 243.0 640 32.2
Nitab4.5_0003858g0070 Nicotiana tabacum HOM05D003662 ORTHO05D001824 1.4e-61 241.5 616 33.3
CiPaw.05G036400 Carya illinoinensis HOM05D003662 ORTHO05D001824 3.1e-61 240.4 625 32.2
Actinidia00263 Actinidia chinensis HOM05D003662 ORTHO05D001824 1.2e-60 238.4 570 34.6
Nitab4.5_0003174g0040 Nicotiana tabacum HOM05D003662 ORTHO05D001824 1.2e-60 238.4 618 32.5
Duzib248G0964 Durio zibethinus HOM05D003662 ORTHO05D001824 5.8e-60 236.1 625 32.5
SalBow5G0541 Salvia bowleyana HOM05D003662 ORTHO05D001824 1.9e-58 231.1 636 32.1
Solyc04g009050.4 Solanum lycopersicum HOM05D003662 ORTHO05D001824 1.2e-57 228.4 451 38.8
QL11p020558 Quercus lobata HOM05D003662 ORTHO05D001824 2.7e-57 227.3 610 32.6
Potri.001G205800 Populus trichocarpa HOM05D003662 ORTHO05D001824 3.5e-57 226.9 623 32.3
Manes.06G010600 Manihot esculenta HOM05D003662 ORTHO05D001824 2.3e-56 224.2 624 30.9
TAR376G0165 Trochodendron aralioides HOM05D003662 ORTHO05D001824 6.7e-56 222.6 667 32.1
SGA_v2.0_scaffold332G48962 Striga asiatica HOM05D003662 ORTHO05D001824 2.5e-55 220.7 538 35.9
PGR042G2509 Punica granatum HOM05D003662 ORTHO05D001824 9.6e-55 218.8 621 31.2
Gorai.012G141800 Gossypium raimondii HOM05D003662 ORTHO05D001824 1.3e-54 218.4 625 30.4
Cfa005607 Carpinus fangiana HOM05D003662 ORTHO05D001824 2.8e-54 217.2 529 34.4
Thecc.02G139400 Theobroma cacao HOM05D003662 ORTHO05D001824 4.8e-54 216.5 616 30.5
Sopen04g004230 Solanum pennellii HOM05D003662 ORTHO05D001824 6.2e-54 216.1 514 35.2
Duzib052G1087 Durio zibethinus HOM05D003662 ORTHO05D001824 8.1e-54 215.7 587 31.3
Nitab4.5_0000078g0010 Nicotiana tabacum HOM05D003662 ORTHO05D001824 3.1e-53 213.8 478 35.4
Sabra01G0157900 Salix brachista HOM05D003662 ORTHO05D001824 6.9e-53 212.6 628 31.5
Gorai.008G015300 Gossypium raimondii HOM05D003662 ORTHO05D001824 2.6e-52 210.7 634 30.0
Gohir.D12G015200 Gossypium hirsutum HOM05D003662 ORTHO05D001824 7.6e-52 209.1 623 29.9
Duzib132G0110 Durio zibethinus HOM05D003662 ORTHO05D001824 1.3e-51 208.4 625 30.4
MSTRG.5266 Avicennia marina HOM05D003662 ORTHO05D001824 2.2e-51 207.6 549 33.2
Manes.14G166300 Manihot esculenta HOM05D003662 ORTHO05D001824 6.4e-51 206.1 564 32.4
Gohir.A04G113200 Gossypium hirsutum HOM05D003662 ORTHO05D001824 8.4e-51 205.7 575 31.1
Prupe.8G062200 Prunus persica HOM05D003662 ORTHO05D001824 1.4e-50 204.9 628 30.7
Gohir.A12G014800 Gossypium hirsutum HOM05D003662 ORTHO05D001824 1.2e-49 201.8 634 29.3
Gohir.D13G054800 Gossypium hirsutum HOM05D003662 ORTHO05D001824 1.6e-49 201.4 622 29.7
SalBow6G1900 Salvia bowleyana HOM05D003662 ORTHO05D001824 1.6e-49 201.4 653 30.0
SalBow6G5751 Salvia bowleyana HOM05D003662 ORTHO05D001824 1.6e-49 201.4 653 30.0
TWI14G0069 Tripterygium wilfordii HOM05D003662 ORTHO05D001824 1.6e-49 201.4 532 33.6
TAR628G0445 Trochodendron aralioides HOM05D003662 ORTHO05D001824 3.5e-49 200.3 640 31.9
Ciclev10027956m.g Citrus clementina HOM05D003662 ORTHO05D001824 3.0e-48 197.2 621 31.1
TAR381G1495 Trochodendron aralioides HOM05D003662 ORTHO05D001824 3.0e-48 197.2 639 31.3
TWI23G0811 Tripterygium wilfordii HOM05D003662 ORTHO05D001824 8.7e-48 195.7 551 32.8
Atru.chr6.854 Acer truncatum HOM05D003662 ORTHO05D001824 2.5e-47 194.1 556 32.2
Atru.chr6.858 Acer truncatum HOM05D003662 ORTHO05D001824 2.5e-47 194.1 556 32.2
Gohir.D04G154500 Gossypium hirsutum HOM05D003662 ORTHO05D001824 2.5e-47 194.1 600 30.0
Gorai.013G061600 Gossypium raimondii HOM05D003662 ORTHO05D001824 3.3e-47 193.7 622 29.3
Peaxi162Scf00003g03637 Petunia axillaris HOM05D003662 ORTHO05D001824 8.2e-46 189.1 507 33.3
Nitab4.5_0005015g0020 Nicotiana tabacum HOM05D003662 ORTHO05D001824 1.4e-45 188.3 517 32.9
Hund06389 Selenicereus undatus HOM05D003662 ORTHO05D001824 2.4e-45 187.6 615 30.4
Sc08g0003380 Simmondsia chinensis HOM05D003662 ORTHO05D001824 5.3e-45 186.4 594 29.6
Eucgr.G00771 Eucalyptus grandis HOM05D003662 ORTHO05D001824 4.5e-44 183.3 568 31.0
Hma1.2p1_0522F.1_g171610 Hydrangea macrophylla HOM05D003662 ORTHO05D001824 2.2e-43 181.0 603 29.5
MSTRG.27792 Avicennia marina HOM05D003662 ORTHO05D001824 1.1e-42 178.7 556 31.1
EL10Ac9g21467 Beta vulgaris HOM05D003662 ORTHO05D001824 5.5e-42 176.4 614 28.7
Hund00056 Selenicereus undatus HOM05D003662 ORTHO05D001824 9.3e-42 175.6 544 31.1
Gohir.A13G066101 Gossypium hirsutum HOM05D003662 ORTHO05D001824 1.6e-41 174.9 578 29.4
Lalb_Chr17g0340141 Lupinus albus HOM05D003662 ORTHO05D001824 6.1e-41 172.9 556 31.3
Lj6g0024827 Lotus japonicus HOM05D003662 ORTHO05D001824 7.9e-41 172.6 594 30.3
GSVIVG01003080001 Vitis vinifera HOM05D003662 ORTHO05D001824 1.0e-40 172.2 344 35.2
ECA240G2352 Erigeron canadensis HOM05D001416 ORTHO05D002549 5.1e-40 169.9 531 29.8
ECA234G0654 Erigeron canadensis HOM05D000867 ORTHO05D000864 1.9e-39 167.9 573 30.7
Gohir.A13G066800 Gossypium hirsutum HOM05D003662 ORTHO05D001824 7.4e-39 166.0 619 27.8
VMungo0540G1102 Vigna mungo HOM05D003662 ORTHO05D001824 1.3e-38 165.2 621 29.0
Rhsim05G0108400 Rhododendron simsii HOM05D003662 ORTHO05D001824 6.3e-38 162.9 584 28.3
arahy.Tifrunner.gnm1.ann1.TKBB16 Arachis hypogaea HOM05D003662 ORTHO05D001824 9.0e-37 159.1 600 28.7
MELO3C019019.2 Cucumis melo HOM05D003662 ORTHO05D001824 9.0e-37 159.1 529 29.1
TPR.G13626 Trifolium pratense HOM05D003662 ORTHO05D001824 4.5e-36 156.8 597 28.6
CsaV3_4G009390 Cucumis sativus L. HOM05D003662 ORTHO05D001824 1.0e-35 155.6 528 29.0
Nn5g30130 Nelumbo nucifera HOM05D003662 ORTHO05D001824 3.8e-35 153.7 562 30.2
DCAR_001790 Daucus carota HOM05D003662 ORTHO05D001824 8.5e-35 152.5 617 28.2
Sed0005558 Sechium edule HOM05D003662 ORTHO05D001824 8.5e-35 152.5 527 29.2
Lalb_Chr10g0097751 Lupinus albus HOM05D003662 ORTHO05D001824 2.5e-34 151.0 524 31.3
Ca_00131_v3 Cicer arietinum L. HOM05D003662 ORTHO05D001824 1.2e-33 148.7 609 28.1
Glyma.08G073300 Glycine max HOM05D003662 ORTHO05D001824 1.6e-33 148.3 499 29.5
Glyma.05G118300 Glycine max HOM05D003662 ORTHO05D001824 4.6e-33 146.7 525 29.1
HanXRQChr03g0066941 Helianthus annuus HOM05D003662 ORTHO05D001824 6.1e-33 146.4 521 29.0
HanXRQChr09g0249611 Helianthus annuus HOM05D003662 ORTHO05D001824 1.0e-32 145.6 519 29.3
Lsat_1_v5_gn_5_107161 Lactuca sativa HOM05D003662 ORTHO05D001824 3.9e-32 143.7 515 28.7
AUR62010118 Chenopodium quinoa HOM05D003662 ORTHO05D001824 8.8e-32 142.5 614 27.4
Lalb_Chr04g0256571 Lupinus albus HOM05D003662 ORTHO05D001824 2.0e-31 141.4 550 29.6
vmacro19926 Vaccinium macrocarpon HOM05D003662 ORTHO05D001824 2.0e-31 141.4 603 26.9
Sed0006995 Sechium edule HOM05D003662 ORTHO05D001824 1.3e-30 138.7 550 29.5
Psat1g216760 Pisum sativum HOM05D003662 ORTHO05D001824 2.8e-30 137.5 579 27.6
THA.LOC104799974 Tarenaya hassleriana HOM05D003662 ORTHO05D001824 8.2e-30 136.0 609 27.1
Lj4g0001073 Lotus japonicus HOM05D003662 ORTHO05D001824 3.1e-29 134.0 530 28.9
Cpa.g.sc42.69 Carica papaya HOM05D003662 ORTHO05D001824 9.1e-29 132.5 558 27.4
Aa31LG1G17760 Aethionema arabicum HOM05D003662 ORTHO05D001824 1.3e-27 128.6 580 28.4
Lj4g0002764 Lotus japonicus HOM05D003662 ORTHO05D001824 1.3e-27 128.6 501 28.9
Lsat_1_v5_gn_9_117361 Lactuca sativa HOM05D003662 ORTHO05D001824 2.9e-27 127.5 522 28.5
ClCG10G009220 Citrullus lanatus HOM05D003662 ORTHO05D001824 8.5e-27 125.9 438 29.2
PSO541G6545 Papaver somniferum HOM05D003662 ORTHO05D001824 1.9e-26 124.8 522 28.9
PSO781G0010 Papaver somniferum HOM05D003662 ORTHO05D001824 3.2e-26 124.0 531 28.6
Medtr4g094248 Medicago truncatula HOM05D003662 ORTHO05D001824 1.0e-24 119.0 538 29.6
MBI02_g08727_MAGBIO Magnolia biondii HOM05D003662 ORTHO05D001824 1.4e-24 118.6 631 27.3
Thhalv10003831m.g Eutrema salsugineum HOM05D003662 ORTHO05D001824 2.3e-24 117.9 581 27.5
HanXRQChr16g0514001 Helianthus annuus HOM05D003662 ORTHO05D001824 3.3e-23 114.0 517 29.6
arahy.Tifrunner.gnm1.ann1.KQY3HF Arachis hypogaea HOM05D003662 ORTHO05D001824 5.7e-23 113.2 134 48.5
Ca_18346_v3 Cicer arietinum L. HOM05D003662 ORTHO05D001824 7.4e-23 112.8 500 28.4
Psat7g098600 Pisum sativum HOM05D003662 ORTHO05D001824 9.7e-23 112.5 532 29.1
unitig_8.g3485 Utricularia gibba HOM05D003662 ORTHO05D001824 3.7e-22 110.5 462 28.1
AT5G64170 Arabidopsis thaliana HOM05D003662 ORTHO05D001824 4.8e-22 110.2 482 29.5
Lalb_Chr20g0123061 Lupinus albus HOM05D003662 ORTHO05D001824 8.2e-22 109.4 493 27.0
Aqoxy6G00804 Aquilegia oxysepala HOM05D003662 ORTHO05D001824 1.4e-21 108.6 459 27.2
CARHR278080 Cardamine hirsuta HOM05D003662 ORTHO05D001824 1.4e-21 108.6 560 27.9
Glyma.08G179400 Glycine max HOM05D003662 ORTHO05D001824 1.8e-21 108.2 143 44.8
Sp2g27230 Schrenkiella parvula HOM05D003662 ORTHO05D001824 2.4e-21 107.8 537 25.0
HanXRQChr10g0295841 Helianthus annuus HOM05D003662 ORTHO05D001824 4.1e-21 107.1 476 28.4
Carub.0008s2496 Capsella rubella HOM05D003662 ORTHO05D001824 5.3e-21 106.7 506 28.3
Lj4g0005319 Lotus japonicus HOM05D003662 ORTHO05D001824 5.3e-21 106.7 466 26.6
Medtr2g008750 Medicago truncatula HOM05D003662 ORTHO05D001824 9.1e-21 105.9 140 45.7
Glyma.15G053000 Glycine max HOM05D003662 ORTHO05D001824 1.5e-20 105.1 144 42.4
Phvul.006G206900 Phaseolus vulgaris HOM05D003662 ORTHO05D001824 2.0e-20 104.8 140 45.0
BcaB07g29728 Brassica carinata HOM05D003662 ORTHO05D001824 5.9e-20 103.2 493 25.8
BraA06t26028Z Brassica rapa HOM05D003662 ORTHO05D001824 5.0e-19 100.1 577 26.7
A06p30890 Brassica napus HOM05D003662 ORTHO05D001824 6.5e-19 99.8 584 27.7
arahy.Tifrunner.gnm1.ann1.9W20Y7 Arachis hypogaea HOM05D003662 ORTHO05D001824 3.2e-18 97.4 144 43.1
AL8G41440 Arabidopsis lyrata HOM05D003662 ORTHO05D001824 4.2e-18 97.1 592 26.7
CDE12G0772 Ceratophyllum demersum HOM05D003662 ORTHO05D001824 7.2e-18 96.3 626 27.0
BcaC01g02674 Brassica carinata HOM05D003662 ORTHO05D001824 9.4e-18 95.9 569 26.0
BcaB02g09780 Brassica carinata HOM05D003662 ORTHO05D001824 1.2e-17 95.5 585 25.6
C03p62080 Brassica napus HOM05D003662 ORTHO05D001824 2.7e-17 94.4 577 25.5
AUR62013113 Chenopodium quinoa HOM05D003662 ORTHO05D001824 2.7e-17 94.4 346 26.9
GSVIVG01003081001 Vitis vinifera HOM05D003662 ORTHO05D001824 2.7e-17 94.4 96 56.2
MBI05_g15584_MAGBIO Magnolia biondii HOM05D003662 ORTHO05D001824 3.6e-17 94.0 456 26.3
BolC3t18469H Brassica oleracea HOM05D003662 ORTHO05D001824 1.8e-16 91.7 575 25.4
Nn1g05340 Nelumbo nucifera HOM05D003662 ORTHO05D001824 3.0e-16 90.9 185 36.8
DCAR_021854 Daucus carota HOM05D003662 ORTHO05D001824 7.4e-15 86.3 127 44.9
Zm00001eb392400 Zea mays HOM05D003662 ORTHO05D001824 7.4e-15 86.3 403 27.8
ATR0753G089 Amborella trichopoda HOM05D003662 ORTHO05D001824 1.3e-14 85.5 679 24.7
Os03g0387900 Oryza sativa ssp. japonica HOM05D003662 ORTHO05D001824 2.8e-14 84.3 469 27.5
BcaC03g18249 Brassica carinata HOM05D003662 ORTHO05D001824 4.1e-13 80.5 393 27.5
CDE04G1684 Ceratophyllum demersum HOM05D003662 ORTHO05D001824 1.2e-12 79.0 593 24.5
arahy.Tifrunner.gnm1.ann1.FXL02A Arachis hypogaea HOM05D003662 ORTHO05D001824 1.6e-12 78.6 95 51.6
Actinidia23991 Actinidia chinensis HOM05D003662 ORTHO05D001824 3.5e-12 77.4 77 55.8
BolC9t53878H Brassica oleracea HOM05D003662 ORTHO05D001824 7.7e-12 76.3 443 25.5
unitig_749.g14155 Utricularia gibba HOM05D003662 ORTHO05D001824 1.7e-11 75.1 106 40.6
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 2.2e-11 74.7 260 29.6
PSO447G0309 Papaver somniferum HOM05D003662 ORTHO05D001824 1.9e-10 71.6 437 27.2
Migut.N01064 Erythranthe guttata HOM05D003662 ORTHO05D001824 3.2e-10 70.9 394 25.6
Zm00001eb018850 Zea mays HOM05D003662 ORTHO05D001824 5.5e-10 70.1 466 24.9
unitig_26.g9063 Utricularia gibba HOM05D003662 ORTHO05D001824 2.1e-09 68.2 421 25.2
unitig_578.g15971 Utricularia gibba HOM05D003662 ORTHO05D001824 2.7e-09 67.8 226 31.4
Cpa.g.sc223.14 Carica papaya HOM05D004414 ORTHO05D001824 1.8e-08 65.1 185 31.4
Psat3g119640 Pisum sativum HOM05D003662 ORTHO05D001824 2.3e-08 64.7 313 27.2
CANSAT56G3557 Cannabis sativa HOM05D004414 ORTHO05D001824 1.5e-07 62.0 181 29.3
C09p09670 Brassica napus HOM05D003662 ORTHO05D001824 2.0e-07 61.6 361 28.3
AUR62026844 Chenopodium quinoa HOM05D004414 ORTHO05D001824 2.6e-07 61.2 202 29.7
AUR62037207 Chenopodium quinoa HOM05D004414 ORTHO05D001824 2.6e-07 61.2 201 30.8
ClCG05G026710 Citrullus lanatus HOM05D004414 ORTHO05D001824 3.4e-07 60.8 186 31.7
FAN01G0485 Fragaria x ananassa HOM05D004414 ORTHO05D001824 4.4e-07 60.5 182 28.0
COL.COLO4_09982 Corchorus olitorius HOM05D004414 ORTHO05D001824 5.7e-07 60.1 188 30.3
DCAR_003244 Daucus carota HOM05D001375 ORTHO05D001222 5.7e-07 60.1 200 27.5
Sc10g0004350 Simmondsia chinensis HOM05D004414 ORTHO05D001824 7.5e-07 59.7 194 32.0
Haze_03067 Corylus avellana HOM05D004414 ORTHO05D001824 9.7e-07 59.3 187 29.9
CiPaw.14G006500 Carya illinoinensis HOM05D004414 ORTHO05D001824 1.3e-06 58.9 185 28.1
RcHm_v2.0_Chr1g0321761 Rosa chinensis HOM05D004414 ORTHO05D001824 1.7e-06 58.5 224 26.8
Dinv32037 Davidia involucrata HOM05D004414 ORTHO05D001824 2.8e-06 57.8 192 28.1
Lsat_1_v5_gn_9_80501 Lactuca sativa HOM05D003662 ORTHO05D001824 2.8e-06 57.8 112 36.6
SEGI_03595 Sequoiadendron giganteum HOM05D004414 ORTHO05D001824 3.7e-06 57.4 141 32.6
Thecc.10G167000 Theobroma cacao HOM05D004414 ORTHO05D001824 3.7e-06 57.4 189 29.6
VMungo1080G0433 Vigna mungo HOM05D004414 ORTHO05D001824 3.7e-06 57.4 184 29.9
FvH4_7g02700 Fragaria vesca HOM05D004414 ORTHO05D001824 4.8e-06 57.0 148 28.4
TPR.G9876 Trifolium pratense HOM05D004414 ORTHO05D001824 6.3e-06 56.6 186 28.5
CiPaw.13G012100 Carya illinoinensis HOM05D004414 ORTHO05D001824 8.3e-06 56.2 185 28.1
MD07G1036600 Malus domestica HOM05D004414 ORTHO05D001824 8.3e-06 56.2 217 26.7


User provided reference genes

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