Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 5.1e-290 1000.3 503 100.0
Oeu032746.1 Olea europaea HOM05D005305 ORTHO05D006394 2.5e-55 220.7 124 86.3
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 6.1e-41 172.9 259 45.9
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 6.3e-38 162.9 236 44.5
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 8.2e-38 162.5 259 40.9
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 1.1e-37 162.2 339 36.9
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 9.1e-37 159.1 243 43.2
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 7.7e-36 156.0 321 38.0
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 7.7e-36 156.0 321 38.0
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 1.7e-35 154.8 270 41.5
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 1.9e-34 151.4 314 36.9
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 4.2e-34 150.2 299 36.5
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 5.5e-34 149.8 231 40.3
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 1.2e-33 148.7 385 32.5
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 1.6e-33 148.3 301 35.9
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 2.1e-33 147.9 386 32.4
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 1.4e-32 145.2 231 39.8
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 1.4e-32 145.2 288 36.8
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 1.8e-32 144.8 247 41.3
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 5.1e-32 143.3 204 41.7
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 8.8e-32 142.5 371 33.7
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 2.6e-31 141.0 242 40.9
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 2.6e-31 141.0 258 39.1
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 3.3e-31 140.6 226 38.9
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 3.3e-31 140.6 226 38.9
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 3.3e-31 140.6 226 38.9
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 5.7e-31 139.8 272 38.2
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 9.7e-31 139.0 175 47.4
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 1.3e-30 138.7 244 40.6
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-30 138.7 266 39.8
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 1.7e-30 138.3 264 38.3
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 3.7e-30 137.1 204 43.1
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 4.8e-30 136.7 243 38.3
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 4.8e-30 136.7 287 34.1
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.8e-30 136.7 162 46.9
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 8.2e-30 136.0 248 40.3
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 1.1e-29 135.6 233 37.3
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 1.8e-29 134.8 233 37.3
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 1.8e-29 134.8 312 36.2
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.8e-29 134.8 241 37.8
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 2.4e-29 134.4 233 36.9
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.1e-29 134.0 273 37.0
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.0e-29 132.9 274 36.9
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 9.1e-29 132.5 237 39.2
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 1.5e-28 131.7 185 41.6
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 1.5e-28 131.7 185 41.6
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 2.0e-28 131.3 324 33.6
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 2.6e-28 131.0 252 37.3
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 7.7e-28 129.4 189 40.7
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 7.7e-28 129.4 162 48.8
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 1.7e-27 128.3 176 42.6
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 2.9e-27 127.5 256 37.9
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 1.1e-26 125.6 157 45.2
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.1e-26 125.6 198 39.9
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 1.4e-26 125.2 145 49.0
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 2.5e-26 124.4 239 37.7
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 3.2e-26 124.0 237 38.0
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 7.2e-26 122.9 195 41.0
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 1.2e-25 122.1 225 38.2
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 3.6e-25 120.6 379 29.8
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.8e-24 118.2 187 41.2
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 3.0e-24 117.5 161 43.5
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 6.7e-24 116.3 214 36.0
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 6.7e-24 116.3 156 44.2
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 2.0e-23 114.8 281 35.6
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 5.7e-23 113.2 233 35.2
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 7.4e-23 112.8 160 44.4
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 7.4e-23 112.8 172 35.5
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 7.4e-23 112.8 259 35.5
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 1.3e-22 112.1 189 40.2
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 1.3e-22 112.1 165 44.2
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-22 111.3 182 38.5
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 2.2e-22 111.3 229 36.2
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 2.8e-22 110.9 165 42.4
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 3.7e-22 110.5 190 37.4
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 4.8e-22 110.2 195 40.0
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 6.3e-22 109.8 162 42.6
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 1.4e-21 108.6 182 39.0
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 1.4e-21 108.6 162 42.6
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 3.1e-21 107.5 240 35.4
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 3.1e-21 107.5 166 41.6
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 4.1e-21 107.1 181 39.2
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 7.0e-21 106.3 197 39.1
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 1.2e-20 105.5 174 39.7
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 2.6e-20 104.4 224 35.7
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 5.9e-20 103.2 218 36.2
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 1.0e-19 102.4 177 39.5
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 1.0e-19 102.4 161 39.8
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 1.3e-19 102.1 215 35.8
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.7e-19 101.7 259 34.4
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.7e-19 101.7 208 37.5
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 2.9e-19 100.9 279 32.3
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 3.8e-19 100.5 163 40.5
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.0e-19 100.1 109 45.0
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 8.5e-19 99.4 186 36.6
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 8.5e-19 99.4 186 36.6
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 8.5e-19 99.4 196 38.8
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.5e-18 98.6 273 33.3
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 2.5e-18 97.8 170 37.1
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 4.2e-18 97.1 170 38.8
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 5.5e-18 96.7 151 40.4
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 7.2e-18 96.3 166 36.7
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 2.1e-17 94.7 158 39.2
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 2.1e-17 94.7 186 35.5
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 2.1e-17 94.7 238 34.0
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.7e-17 94.4 138 38.4
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 1.0e-16 92.4 204 32.8
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 1.4e-16 92.0 179 37.4
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 1.4e-16 92.0 178 36.5
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 5.2e-16 90.1 211 34.1
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 2.0e-15 88.2 100 51.0
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.7e-15 86.7 100 50.0
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-14 84.7 170 34.1
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 2.8e-14 84.3 121 43.0
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-14 84.0 138 37.7
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-14 84.0 138 37.7
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-14 84.0 138 37.7
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-14 84.0 138 37.7
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 4.8e-14 83.6 137 38.0
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 6.3e-14 83.2 159 32.1
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.1e-13 80.9 138 35.5
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 4.1e-13 80.5 187 28.9
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 9.1e-13 79.3 170 34.7
MELO3C005314.2 Cucumis melo HOM05D002727 ORTHO05D002856 4.5e-12 77.0 159 30.8
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.9e-12 76.6 138 35.5
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 1.5e-10 72.0 144 29.2
FAN22G1821 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.7e-09 67.0 75 50.7
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 6.1e-09 66.6 136 30.1
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 1.0e-08 65.9 173 28.9
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.0e-08 65.9 162 29.6
FAN06G1687 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.4e-08 65.5 132 34.1
FAN10G2401 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.4e-08 65.5 132 34.1
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 1.8e-08 65.1 104 38.5
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 1.8e-08 65.1 104 39.4
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-08 65.1 166 27.7
Nn3g19189 Nelumbo nucifera HOM05D010623 ORTHO05D012718 3.0e-08 64.3 294 27.6
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 3.0e-08 64.3 139 30.9
ECA248G2956 Erigeron canadensis HOM05D005305 ORTHO05D006394 5.2e-08 63.5 105 41.0
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 5.2e-08 63.5 123 34.1
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.2e-08 63.5 123 35.0
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.8e-08 62.8 148 29.7
FAN10G0099 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.2e-07 62.4 123 33.3
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 1.2e-07 62.4 146 28.8
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.5e-07 62.0 143 30.1
Lalb_Chr24g0403301 Lupinus albus HOM05D002727 ORTHO05D002856 1.5e-07 62.0 141 27.0
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 2.0e-07 61.6 154 30.5
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 3.4e-07 60.8 93 38.7
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.4e-07 60.8 173 27.7
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 3.4e-07 60.8 127 33.1
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 3.4e-07 60.8 110 35.5
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 4.4e-07 60.5 93 38.7
FAN02G0051 Fragaria x ananassa HOM05D002727 ORTHO05D002856 4.4e-07 60.5 156 30.1
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 5.7e-07 60.1 172 27.9
Cpa.g.sc171.13 Carica papaya HOM05D002727 ORTHO05D002856 7.5e-07 59.7 174 27.0
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.5e-07 59.7 166 26.5
Aqoxy2G00907 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 9.8e-07 59.3 131 30.5
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 9.8e-07 59.3 162 26.5
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 9.8e-07 59.3 131 27.5
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-06 58.5 166 26.5
Sabra17G0092700 Salix brachista HOM05D002727 ORTHO05D002856 2.2e-06 58.2 144 27.1
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.8e-06 57.8 109 33.0
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 3.7e-06 57.4 150 28.0
Dinv18560 Davidia involucrata HOM05D007205 ORTHO05D009175 4.8e-06 57.0 123 29.3
Hma1.2p1_0712F.1_g207580 Hydrangea macrophylla HOM05D007205 ORTHO05D009175 4.8e-06 57.0 141 27.7
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 4.8e-06 57.0 136 27.9
ECA233G0199 Erigeron canadensis HOM05D007205 ORTHO05D009175 8.3e-06 56.2 137 25.5
FAN09G3462 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.3e-06 56.2 151 29.1
SEGI_15553 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 8.3e-06 56.2 108 33.3


User provided reference genes

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