Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000193.1 Olea europaea HOM05D003483 ORTHO05D004101 4.3e-101 371.3 187 100.0
Peaxi162Scf00011g00242 Petunia axillaris HOM05D003483 ORTHO05D004101 7.2e-48 194.5 186 58.6
TAR376G1167 Trochodendron aralioides HOM05D003483 ORTHO05D004101 2.7e-47 192.6 127 74.8
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 1.4e-46 190.3 137 70.1
CSS0026849 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.8e-46 189.9 149 66.4
MBI03_g28296_MAGBIO Magnolia biondii HOM05D003483 ORTHO05D004101 1.2e-45 187.2 193 57.0
ATR0684G013 Amborella trichopoda HOM05D003483 ORTHO05D004101 3.4e-45 185.7 123 74.0
Duzib248G1166 Durio zibethinus HOM05D003483 ORTHO05D004101 3.4e-45 185.7 178 59.0
Dinv24264 Davidia involucrata HOM05D003483 ORTHO05D004101 5.7e-45 184.9 178 61.2
SalBow6G7247 Salvia bowleyana HOM05D003483 ORTHO05D004101 5.7e-45 184.9 182 57.7
Cc02_g22350 Coffea canephora HOM05D003483 ORTHO05D004101 7.5e-45 184.5 126 72.2
PGSC0003DMG400023753 Solanum tuberosum HOM05D003483 ORTHO05D004101 7.5e-45 184.5 151 64.9
GSVIVG01022998001 Vitis vinifera HOM05D003483 ORTHO05D004101 7.5e-45 184.5 123 72.4
COL.COLO4_17881 Corchorus olitorius HOM05D003483 ORTHO05D004101 9.8e-45 184.1 181 59.1
SalBow6G5560 Salvia bowleyana HOM05D003483 ORTHO05D004101 9.8e-45 184.1 182 57.7
VMungo0540G1714 Vigna mungo HOM05D003483 ORTHO05D004101 9.8e-45 184.1 177 59.3
QL02p098403 Quercus lobata HOM05D003483 ORTHO05D004101 2.8e-44 182.6 171 59.1
Hma1.2p1_0217F.1_g091970 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 4.9e-44 181.8 179 56.4
Nitab4.5_0002245g0170 Nicotiana tabacum HOM05D003483 ORTHO05D004101 4.9e-44 181.8 126 73.0
Solyc01g104320.4 Solanum lycopersicum HOM05D003483 ORTHO05D004101 4.9e-44 181.8 171 60.2
Glyma.15G047700 Glycine max HOM05D003483 ORTHO05D004101 6.3e-44 181.4 125 72.8
Gohir.A04G126900 Gossypium hirsutum HOM05D003483 ORTHO05D004101 8.3e-44 181.0 152 62.5
Phvul.006G213100 Phaseolus vulgaris HOM05D003483 ORTHO05D004101 8.3e-44 181.0 176 58.5
Gorai.012G160700 Gossypium raimondii HOM05D003483 ORTHO05D004101 1.4e-43 180.3 152 62.5
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 1.4e-43 180.3 188 54.8
CiPaw.06G148300 Carya illinoinensis HOM05D003483 ORTHO05D004101 1.8e-43 179.9 153 60.8
Glyma.08G185000 Glycine max HOM05D003483 ORTHO05D004101 1.8e-43 179.9 146 65.1
Nitab4.5_0003819g0040 Nicotiana tabacum HOM05D003483 ORTHO05D004101 1.8e-43 179.9 126 72.2
Cfa005534 Carpinus fangiana HOM05D003483 ORTHO05D004101 2.4e-43 179.5 151 61.6
CAN.G1577.5 Capsicum annuum HOM05D003483 ORTHO05D004101 5.4e-43 178.3 159 61.6
Eucgr.I02715 Eucalyptus grandis HOM05D003483 ORTHO05D004101 7.0e-43 177.9 118 74.6
Manes.07G014500 Manihot esculenta HOM05D003483 ORTHO05D004101 7.0e-43 177.9 168 57.1
Nn1g08607 Nelumbo nucifera HOM05D003483 ORTHO05D004101 7.0e-43 177.9 148 60.8
MSTRG.5236 Avicennia marina HOM05D003483 ORTHO05D004101 2.7e-42 176.0 190 54.2
Medtr2g007640 Medicago truncatula HOM05D003483 ORTHO05D004101 4.5e-42 175.3 131 66.4
Ciclev10002308m.g Citrus clementina HOM05D003483 ORTHO05D004101 5.9e-42 174.9 123 70.7
arahy.Tifrunner.gnm1.ann1.G5V2PN Arachis hypogaea HOM05D003483 ORTHO05D004101 1.3e-41 173.7 132 67.4
Psat1g224320 Pisum sativum HOM05D003483 ORTHO05D004101 1.3e-41 173.7 130 69.2
MD15G1421400 Malus domestica HOM05D003483 ORTHO05D004101 1.7e-41 173.3 173 57.2
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 1.7e-41 173.3 132 65.9
arahy.Tifrunner.gnm1.ann1.MUYK2J Arachis hypogaea HOM05D003483 ORTHO05D004101 2.3e-41 172.9 176 56.8
Rhsim11G0130100 Rhododendron simsii HOM05D003483 ORTHO05D004101 2.9e-41 172.6 178 57.3
Dinv19357 Davidia involucrata HOM05D003483 ORTHO05D004101 3.8e-41 172.2 181 55.8
MD15G1421500 Malus domestica HOM05D003483 ORTHO05D004101 3.8e-41 172.2 181 55.8
MELO3C010097.2 Cucumis melo HOM05D003483 ORTHO05D004101 6.6e-41 171.4 163 55.2
vmacro01768 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 8.6e-41 171.0 149 61.7
HanXRQChr03g0066831 Helianthus annuus HOM05D003483 ORTHO05D004101 1.1e-40 170.6 129 67.4
CSS0038053 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.5e-40 170.2 149 61.7
COL.COLO4_17880 Corchorus olitorius HOM05D003483 ORTHO05D004101 1.5e-40 170.2 173 52.6
Hma1.2p1_0557F.1_g178380 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 1.5e-40 170.2 184 55.4
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 2.5e-40 169.5 180 52.2
PGR142G0005 Punica granatum HOM05D003483 ORTHO05D004101 2.5e-40 169.5 163 56.4
GSVIVG01022995001 Vitis vinifera HOM05D003483 ORTHO05D004101 3.3e-40 169.1 175 56.6
Manes.07G014600 Manihot esculenta HOM05D003483 ORTHO05D004101 4.3e-40 168.7 123 70.7
Ca_00080_v3 Cicer arietinum L. HOM05D003483 ORTHO05D004101 7.2e-40 167.9 147 61.2
Haze_01644 Corylus avellana HOM05D003483 ORTHO05D004101 7.2e-40 167.9 127 66.1
ECA240G0807 Erigeron canadensis HOM05D003483 ORTHO05D004101 7.2e-40 167.9 106 75.5
Prupe.1G566700 Prunus persica HOM05D003483 ORTHO05D004101 7.2e-40 167.9 185 55.1
FvH4_5g29660 Fragaria vesca HOM05D003483 ORTHO05D004101 9.5e-40 167.5 176 57.4
Gohir.D01G168600 Gossypium hirsutum HOM05D003483 ORTHO05D004101 9.5e-40 167.5 174 52.9
Pp3c23_15450 Physcomitrium patens HOM05D003483 ORTHO05D004101 9.5e-40 167.5 126 67.5
Thecc.02G039900 Theobroma cacao HOM05D003483 ORTHO05D004101 9.5e-40 167.5 123 69.1
FAN18G3047 Fragaria x ananassa HOM05D003483 ORTHO05D004101 1.2e-39 167.2 177 57.1
SGA_v2.0_scaffold145G36069 Striga asiatica HOM05D003483 ORTHO05D004101 1.2e-39 167.2 182 52.7
FAN13G0976 Fragaria x ananassa HOM05D003483 ORTHO05D004101 1.6e-39 166.8 176 56.8
Gohir.A01G177800 Gossypium hirsutum HOM05D003483 ORTHO05D004101 2.1e-39 166.4 167 53.9
Gorai.002G209300 Gossypium raimondii HOM05D003483 ORTHO05D004101 2.1e-39 166.4 174 52.9
Oeu000192.1 Olea europaea HOM05D003483 ORTHO05D004101 2.1e-39 166.4 126 69.0
RcHm_v2.0_Chr7g0222941 Rosa chinensis HOM05D003483 ORTHO05D004101 2.1e-39 166.4 177 55.4
Ca_00085_v3 Cicer arietinum L. HOM05D003483 ORTHO05D004101 2.8e-39 166.0 129 65.1
Sed0016447 Sechium edule HOM05D003483 ORTHO05D004101 2.8e-39 166.0 176 52.3
Cpa.g.sc2.3 Carica papaya HOM05D003483 ORTHO05D004101 4.7e-39 165.2 124 67.7
Cfa005532 Carpinus fangiana HOM05D003483 ORTHO05D004101 4.7e-39 165.2 178 53.9
Haze_01648 Corylus avellana HOM05D003483 ORTHO05D004101 4.7e-39 165.2 176 55.1
CsaV3_1G045010 Cucumis sativus L. HOM05D003483 ORTHO05D004101 4.7e-39 165.2 183 53.6
Eucgr.I02716 Eucalyptus grandis HOM05D003483 ORTHO05D004101 4.7e-39 165.2 127 66.9
Gohir.D04G171800 Gossypium hirsutum HOM05D003483 ORTHO05D004101 4.7e-39 165.2 103 74.8
Lj6g0022843 Lotus japonicus HOM05D003483 ORTHO05D004101 4.7e-39 165.2 154 57.1
Sabra01G0161900 Salix brachista HOM05D003483 ORTHO05D004101 4.7e-39 165.2 180 55.0
TAR381G1595 Trochodendron aralioides HOM05D003483 ORTHO05D004101 6.1e-39 164.9 127 64.6
CANSAT11G2020 Cannabis sativa HOM05D003483 ORTHO05D004101 8.0e-39 164.5 179 53.6
Cpa.g.sc2.4 Carica papaya HOM05D003483 ORTHO05D004101 8.0e-39 164.5 125 64.0
PGR142G1721 Punica granatum HOM05D003483 ORTHO05D004101 8.0e-39 164.5 124 66.1
Atru.chr6.836 Acer truncatum HOM05D003483 ORTHO05D004101 1.0e-38 164.1 172 55.2
Thecc.02G039800 Theobroma cacao HOM05D003483 ORTHO05D004101 1.0e-38 164.1 136 62.5
TPR.G2131 Trifolium pratense HOM05D003483 ORTHO05D004101 1.0e-38 164.1 185 53.5
Cc02_g22380 Coffea canephora HOM05D003483 ORTHO05D004101 1.4e-38 163.7 185 53.0
Ciclev10003624m.g Citrus clementina HOM05D003483 ORTHO05D004101 1.8e-38 163.3 184 53.8
Lj9A307T41 Lonicera japonica HOM05D003483 ORTHO05D004101 1.8e-38 163.3 123 67.5
CiPaw.05G043400 Carya illinoinensis HOM05D003483 ORTHO05D004101 2.3e-38 162.9 172 53.5
Actinidia39049 Actinidia chinensis HOM05D003483 ORTHO05D004101 3.0e-38 162.5 183 54.1
TWI59G0966 Tripterygium wilfordii HOM05D003483 ORTHO05D004101 3.0e-38 162.5 182 53.3
Medtr2g007300 Medicago truncatula HOM05D003483 ORTHO05D004101 4.0e-38 162.2 150 59.3
SMO347G0483 Selaginella moellendorffii HOM05D003483 ORTHO05D004101 4.0e-38 162.2 114 68.4
CANSAT11G2084 Cannabis sativa HOM05D003483 ORTHO05D004101 8.9e-38 161.0 175 54.9
Lj6g0009955 Lotus japonicus HOM05D003483 ORTHO05D004101 8.9e-38 161.0 151 59.6
Nn1g08897 Nelumbo nucifera HOM05D003483 ORTHO05D004101 8.9e-38 161.0 177 54.2
CSS0036812 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.2e-37 160.6 163 56.4
Lsat_1_v5_gn_9_118240 Lactuca sativa HOM05D003483 ORTHO05D004101 1.2e-37 160.6 103 74.8
vmacro19900 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 1.5e-37 160.2 170 52.4
Aqoxy5G02410 Aquilegia oxysepala HOM05D003483 ORTHO05D004101 2.0e-37 159.8 181 51.9
QL02p098396 Quercus lobata HOM05D003483 ORTHO05D004101 2.0e-37 159.8 180 52.2
Glyma.08G185800 Glycine max HOM05D003483 ORTHO05D004101 2.6e-37 159.5 131 61.8
arahy.Tifrunner.gnm1.ann1.021TT5 Arachis hypogaea HOM05D003483 ORTHO05D004101 7.5e-37 157.9 124 64.5
AagrBONN_evm.TU.Sc2ySwM_344.1832 Anthoceros agrestis HOM05D003483 ORTHO05D004101 9.8e-37 157.5 118 66.9
Migut.N01039 Erythranthe guttata HOM05D003483 ORTHO05D004101 1.3e-36 157.1 126 65.1
Glyma.15G047000 Glycine max HOM05D003483 ORTHO05D004101 1.3e-36 157.1 127 63.0
Sc06g0009790 Simmondsia chinensis HOM05D003483 ORTHO05D004101 1.3e-36 157.1 176 51.7
DCAR_021518 Daucus carota HOM05D003483 ORTHO05D004101 2.2e-36 156.4 179 53.6
Ah.01g002720 Amaranthus hybridus HOM05D003483 ORTHO05D004101 2.9e-36 156.0 117 69.2
Potri.001G209600 Populus trichocarpa HOM05D003483 ORTHO05D004101 3.7e-36 155.6 180 52.8
FAN04G0580 Fragaria x ananassa HOM05D003483 ORTHO05D004101 4.9e-36 155.2 178 54.5
Lj6g0024243 Lotus japonicus HOM05D003483 ORTHO05D004101 8.3e-36 154.5 135 62.2
Os03g0704100 Oryza sativa ssp. japonica HOM05D003483 ORTHO05D004101 8.3e-36 154.5 132 59.1
Psat1g224560 Pisum sativum HOM05D003483 ORTHO05D004101 1.1e-35 154.1 180 52.8
CAN.G336.10 Capsicum annuum HOM05D003483 ORTHO05D004101 1.8e-35 153.3 178 51.1
HanXRQChr06g0185051 Helianthus annuus HOM05D003483 ORTHO05D004101 1.8e-35 153.3 123 65.0
Mapoly0103s0070 Marchantia polymorpha HOM05D003483 ORTHO05D004101 1.8e-35 153.3 117 65.8
MSTRG.5233 Avicennia marina HOM05D003483 ORTHO05D004101 2.4e-35 152.9 124 63.7
Hund01591 Selenicereus undatus HOM05D003483 ORTHO05D004101 2.4e-35 152.9 152 55.9
VMungo0540G0086 Vigna mungo HOM05D003483 ORTHO05D004101 5.4e-35 151.8 125 63.2
EL10Ac9g22715 Beta vulgaris HOM05D003483 ORTHO05D004101 7.0e-35 151.4 179 52.5
SalBow6G5065 Salvia bowleyana HOM05D003483 ORTHO05D004101 2.0e-34 149.8 126 62.7
SalBow6G7249 Salvia bowleyana HOM05D003483 ORTHO05D004101 2.0e-34 149.8 126 62.7
vmacro01767 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 2.0e-34 149.8 109 70.6
Solyc11g044530.2 Solanum lycopersicum HOM05D003483 ORTHO05D004101 3.5e-34 149.1 133 58.6
Lalb_Chr15g0090651 Lupinus albus HOM05D003483 ORTHO05D004101 4.6e-34 148.7 125 61.6
unitig_699.g19861 Utricularia gibba HOM05D003483 ORTHO05D004101 4.6e-34 148.7 127 60.6
AUR62015054 Chenopodium quinoa HOM05D003483 ORTHO05D004101 5.9e-34 148.3 119 65.5
Phvul.006G214200 Phaseolus vulgaris HOM05D003483 ORTHO05D004101 2.3e-33 146.4 125 61.6
Sabra03G0012000 Salix brachista HOM05D003483 ORTHO05D004101 5.0e-33 145.2 173 48.6
Sopen11g020090 Solanum pennellii HOM05D003483 ORTHO05D004101 6.6e-33 144.8 130 59.2
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 8.6e-33 144.4 107 70.1
BcaC06g33930 Brassica carinata HOM05D003483 ORTHO05D004101 3.3e-32 142.5 120 60.0
C07p35050 Brassica napus HOM05D003483 ORTHO05D004101 3.3e-32 142.5 161 49.1
Lsat_1_v5_gn_9_118261 Lactuca sativa HOM05D003483 ORTHO05D004101 5.6e-32 141.7 177 48.6
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 7.3e-32 141.4 161 48.4
AT3G26070 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 9.5e-32 141.0 124 57.3
A06p42270 Brassica napus HOM05D003483 ORTHO05D004101 9.5e-32 141.0 161 49.1
BraA06t27143Z Brassica rapa HOM05D003483 ORTHO05D004101 9.5e-32 141.0 161 49.1
AL5G14750 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 1.2e-31 140.6 175 45.7
Carub.0005s0393 Capsella rubella HOM05D003483 ORTHO05D004101 1.2e-31 140.6 171 45.6
BcaC06g31094 Brassica carinata HOM05D003483 ORTHO05D004101 2.1e-31 139.8 120 58.3
Thhalv10004837m.g Eutrema salsugineum HOM05D003483 ORTHO05D004101 2.8e-31 139.4 171 45.0
Aa31LG2G6290 Aethionema arabicum HOM05D003483 ORTHO05D004101 4.7e-31 138.7 171 46.2
Peaxi162Scf00152g01330 Petunia axillaris HOM05D003483 ORTHO05D004101 8.0e-31 137.9 127 57.5
THA.LOC104825685 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 8.0e-31 137.9 124 58.9
Sp2g15270 Schrenkiella parvula HOM05D003483 ORTHO05D004101 1.4e-30 137.1 171 45.0
AL5G14760 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 1.8e-30 136.7 156 48.7
AT3G26080 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 4.0e-30 135.6 104 62.5
Carub.0005s0394 Capsella rubella HOM05D003483 ORTHO05D004101 6.8e-30 134.8 124 55.6
CARHR147060 Cardamine hirsuta HOM05D003483 ORTHO05D004101 6.8e-30 134.8 124 54.8
THA.LOC104824018 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 7.5e-29 131.3 129 54.3
TPR.G22934 Trifolium pratense HOM05D003483 ORTHO05D004101 6.0e-26 121.7 73 76.7
arahy.Tifrunner.gnm1.ann1.19GFYA Arachis hypogaea HOM05D003483 ORTHO05D004101 1.1e-24 117.5 116 54.3
Nitab4.5_0000044g0170 Nicotiana tabacum HOM05D003483 ORTHO05D004101 1.5e-24 117.1 126 52.4
TPR.G2065 Trifolium pratense HOM05D003483 ORTHO05D004101 2.5e-24 116.3 69 75.4
Sopen01g046770 Solanum pennellii HOM05D003483 ORTHO05D004101 4.3e-24 115.5 138 52.2
Cre03.g188650 Chlamydomonas reinhardtii HOM05D003483 ORTHO05D004101 5.6e-24 115.2 106 53.8
MCO03G426 Micromonas commoda HOM05D003483 ORTHO05D004101 2.8e-23 112.8 105 56.2
HPP92_011153 Vanilla planifolia HOM05D003483 ORTHO05D004101 4.7e-23 112.1 132 49.2
Haze_01640 Corylus avellana HOM05D003483 ORTHO05D004101 1.4e-22 110.5 89 62.9
AUR62017511 Chenopodium quinoa HOM05D003483 ORTHO05D004101 1.8e-22 110.2 75 70.7
Actinidia00213 Actinidia chinensis HOM05D003483 ORTHO05D004101 2.3e-22 109.8 146 46.6
PRCOL_00005437 Prasinoderma coloniale HOM05D003483 ORTHO05D004101 2.3e-22 109.8 98 56.1
Haze_01645 Corylus avellana HOM05D003483 ORTHO05D004101 4.0e-22 109.0 89 61.8
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 8.9e-22 107.8 96 59.4
AUR62015051 Chenopodium quinoa HOM05D003483 ORTHO05D004101 2.0e-21 106.7 114 51.8
Nitab4.5_0001783g0130 Nicotiana tabacum HOM05D003483 ORTHO05D004101 3.4e-21 105.9 74 68.9
AUR62017510 Chenopodium quinoa HOM05D003483 ORTHO05D004101 7.5e-21 104.8 114 50.9
BcaC06g31097 Brassica carinata HOM05D000468 ORTHO05D004101 4.9e-20 102.1 73 64.4
TPR.G30715 Trifolium pratense HOM05D003483 ORTHO05D004101 9.2e-19 97.8 92 58.7
Actinidia17473 Actinidia chinensis HOM05D004517 ORTHO05D005366 1.6e-18 97.1 68 75.0
Duzib132G0067 Durio zibethinus HOM05D003483 ORTHO05D004101 1.6e-18 97.1 175 38.9
PSO170G3925 Papaver somniferum HOM05D003483 ORTHO05D004101 2.3e-17 93.2 156 39.7
ClCG09G014000 Citrullus lanatus HOM05D003483 ORTHO05D004101 3.9e-17 92.4 96 52.1
CBR_g3139 Chara braunii HOM05D003483 ORTHO05D004101 6.6e-17 91.7 106 48.1
Hund01593 Selenicereus undatus HOM05D003483 ORTHO05D004101 1.9e-16 90.1 155 41.3
RcHm_v2.0_Chr7g0222921 Rosa chinensis HOM05D003483 ORTHO05D004101 2.5e-16 89.7 202 35.1
MCO15G394 Micromonas commoda HOM05D003483 ORTHO05D004101 1.4e-14 84.0 94 44.7
Sopen01g046760 Solanum pennellii HOM05D003483 ORTHO05D004101 6.4e-12 75.1 42 76.2
TPR.G31211 Trifolium pratense HOM05D003483 ORTHO05D004101 2.1e-10 70.1 51 66.7
PRCOL_00003721 Prasinoderma coloniale HOM05D003483 ORTHO05D002254 8.6e-09 64.7 105 37.1
MCO10G165 Micromonas commoda HOM05D003483 ORTHO05D268554 1.6e-07 60.5 100 32.0
HPP92_027704 Vanilla planifolia HOM05D003483 ORTHO05D004101 2.4e-06 56.6 59 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 4.0e-06 55.8 63 46.0


User provided reference genes

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