Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 1.9e-234 815.5 403 100.0
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 5.4e-141 505.0 415 64.3
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 3.9e-139 498.8 471 59.2
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.5e-138 496.9 463 59.4
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 2.3e-136 489.6 466 57.7
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 2.6e-135 486.1 473 56.0
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 5.8e-135 485.0 465 57.6
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 2.2e-134 483.0 506 54.3
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 2.2e-134 483.0 467 57.4
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 2.9e-134 482.6 466 57.1
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 1.4e-133 480.3 458 58.5
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 6.0e-132 474.9 470 57.2
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 6.8e-128 461.5 492 53.0
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 2.0e-127 459.9 450 56.0
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 7.1e-125 451.4 424 56.4
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 2.4e-120 436.4 471 54.1
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 4.0e-120 435.6 405 58.5
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 8.9e-120 434.5 488 50.4
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 7.6e-119 431.4 475 54.5
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 2.4e-117 426.4 425 58.6
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 5.4e-117 425.2 474 52.1
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.6e-113 413.7 443 53.0
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.6e-113 413.7 466 51.1
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 3.6e-113 412.5 448 52.7
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 8.1e-113 411.4 433 53.1
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 1.4e-112 410.6 450 54.0
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 2.4e-112 409.8 440 53.0
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 2.0e-111 406.8 445 51.5
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 2.9e-110 402.9 419 52.7
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 2.9e-110 402.9 419 52.7
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 5.4e-109 398.7 477 49.9
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 3.5e-108 396.0 445 50.6
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.1e-106 391.0 450 51.6
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 7.4e-106 388.3 449 49.2
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 2.1e-105 386.7 476 48.3
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 1.4e-104 384.0 378 58.7
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 3.1e-104 382.9 447 48.1
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 2.9e-102 376.3 431 52.7
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 3.8e-102 375.9 429 51.5
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 6.4e-102 375.2 466 49.8
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 3.2e-101 372.9 449 46.8
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 3.2e-101 372.9 435 50.3
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 1.6e-100 370.5 448 48.4
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 6.0e-100 368.6 455 48.1
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.5e-98 363.2 444 48.9
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.3e-98 362.8 386 53.4
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 7.4e-98 361.7 424 46.2
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 2.1e-97 360.1 325 61.5
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 1.4e-96 357.5 441 47.8
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 1.8e-96 357.1 477 46.8
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 3.1e-96 356.3 431 48.5
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 4.5e-95 352.4 432 48.1
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 2.5e-93 346.7 487 44.8
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 8.7e-91 338.2 392 49.2
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 1.2e-87 327.8 457 44.4
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 5.5e-85 318.9 363 49.3
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 5.5e-85 318.9 377 46.2
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 2.6e-79 300.1 416 43.0
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 2.6e-79 300.1 394 45.9
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 1.0e-78 298.1 367 45.0
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 5.5e-77 292.4 370 44.1
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 9.4e-77 291.6 382 44.5
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 2.1e-76 290.4 374 46.5
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 6.1e-76 288.9 390 43.1
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 3.3e-74 283.1 382 43.2
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 1.3e-73 281.2 358 45.0
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 4.8e-73 279.3 416 43.5
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 1.1e-72 278.1 409 40.1
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 4.5e-71 272.7 374 41.2
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 2.2e-70 270.4 363 41.9
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 2.2e-70 270.4 412 42.0
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 3.8e-70 269.6 367 43.9
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 5.0e-70 269.2 390 43.3
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 2.5e-69 266.9 372 43.5
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 5.5e-69 265.8 378 40.7
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 5.5e-69 265.8 369 43.6
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 2.1e-68 263.8 378 40.5
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 2.7e-68 263.5 378 40.5
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 3.6e-68 263.1 366 41.5
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 4.7e-68 262.7 332 45.8
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 6.1e-68 262.3 379 41.2
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 8.0e-68 261.9 325 45.2
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 1.8e-67 260.8 378 40.2
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 1.8e-67 260.8 378 40.2
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 1.1e-66 258.1 365 41.1
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 7.4e-66 255.4 370 41.6
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 2.8e-65 253.4 371 42.0
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 1.0e-62 245.0 365 41.4
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 5.0e-62 242.7 370 40.3
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 9.4e-61 238.4 311 43.4
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 8.0e-60 235.3 284 45.8
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 2.0e-58 230.7 321 42.4
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 2.0e-58 230.7 304 44.1
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 3.3e-58 229.9 291 45.4
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 1.3e-57 228.0 366 39.1
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 2.2e-57 227.3 275 44.7
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 4.8e-57 226.1 314 47.1
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 3.1e-56 223.4 398 37.2
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 5.3e-56 222.6 291 44.0
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 9.1e-56 221.9 234 53.4
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.7e-54 217.6 270 45.6
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 5.5e-53 212.6 350 37.4
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 3.6e-52 209.9 298 41.3
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 8.0e-52 208.8 299 41.8
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.8e-51 207.6 248 45.2
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 2.3e-51 207.2 313 39.3
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 6.8e-51 205.7 364 37.6
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 2.0e-50 204.1 375 33.3
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 2.0e-50 204.1 308 39.9
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 9.8e-50 201.8 293 40.6
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.3e-49 201.4 300 40.0
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 6.1e-44 182.6 141 63.1
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.4e-43 181.4 313 39.0
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 3.4e-42 176.8 286 38.5
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 4.4e-42 176.4 286 38.5
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.4e-40 171.4 311 39.5
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 9.2e-40 168.7 210 43.8
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.2e-39 168.3 141 56.0
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 5.9e-39 166.0 232 39.7
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 1.0e-38 165.2 216 45.4
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 1.7e-38 164.5 236 43.2
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 1.7e-38 164.5 236 43.2
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.7e-38 164.5 337 33.8
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 2.8e-36 157.1 193 50.3
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 1.4e-35 154.8 338 33.1
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 1.5e-34 151.4 214 39.3
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 1.5e-34 151.4 146 53.4
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 1.5e-34 151.4 146 53.4
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 2.2e-33 147.5 207 44.4
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 2.9e-33 147.1 106 66.0
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 1.2e-31 141.7 134 56.7
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 1.2e-31 141.7 232 36.6
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 2.0e-31 141.0 150 50.7
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 9.5e-29 132.1 157 45.9
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 4.0e-27 126.7 209 40.2
Dinv42629 Davidia involucrata HOM05D005167 ORTHO05D006312 2.3e-22 110.9 70 70.0
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 3.0e-22 110.5 154 37.0
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 1.1e-21 108.6 166 39.8
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 1.8e-19 101.3 106 44.3
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 3.1e-19 100.5 157 41.4
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.2e-18 98.6 127 46.5
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 1.5e-18 98.2 242 28.1
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 5.8e-18 96.3 229 31.0
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 2.1e-15 87.8 120 40.8
Rhsim04G0168400 Rhododendron simsii HOM05D000018 ORTHO05D008577 3.0e-14 84.0 76 61.8
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 6.4e-09 66.2 65 50.8
COL.COLO4_16251 Corchorus olitorius HOM05D005167 ORTHO05D006312 3.9e-06 57.0 74 43.2
Nn2g11162 Nelumbo nucifera HOM05D000080 ORTHO05D000053 3.9e-06 57.0 39 69.2


User provided reference genes

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