Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 1.7e-174 615.9 313 100.0
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 1.3e-126 456.8 300 78.0
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 8.5e-126 454.1 309 79.3
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 1.1e-122 443.7 308 76.0
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 1.1e-120 437.2 310 74.5
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 1.4e-120 436.8 313 75.7
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 3.1e-120 435.6 316 72.2
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 5.3e-120 434.9 310 73.9
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 5.3e-120 434.9 310 73.9
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 5.9e-119 431.4 310 73.5
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.2e-118 429.5 310 73.2
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 1.4e-117 426.8 294 76.9
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 2.7e-116 422.5 316 72.8
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 4.7e-116 421.8 304 75.3
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 8.0e-116 421.0 304 72.7
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 1.0e-115 420.6 304 74.7
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 1.0e-115 420.6 294 77.2
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 2.3e-115 419.5 309 71.8
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 2.3e-115 419.5 231 89.2
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 2.6e-114 416.0 242 86.4
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 2.6e-114 416.0 315 72.4
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 1.3e-113 413.7 302 73.2
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 1.3e-113 413.7 298 73.2
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 1.7e-113 413.3 303 73.9
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 2.2e-113 412.9 274 77.7
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 6.3e-113 411.4 288 75.0
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 2.4e-112 409.5 287 74.9
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 3.1e-112 409.1 306 71.9
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 2.0e-111 406.4 241 84.6
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 7.7e-111 404.4 306 71.2
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 1.0e-110 404.1 302 71.2
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.3e-110 403.7 249 83.5
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.7e-110 403.3 292 72.6
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.7e-110 403.3 318 70.1
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 2.9e-110 402.5 299 70.2
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 2.9e-110 402.5 240 82.5
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 3.8e-110 402.1 283 75.3
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 8.5e-110 401.0 226 87.2
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 1.5e-109 400.2 237 86.1
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 1.9e-109 399.8 242 83.1
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 1.9e-109 399.8 283 75.3
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 1.9e-109 399.8 246 83.3
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 2.5e-109 399.4 288 73.3
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 3.2e-109 399.1 264 78.0
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 3.2e-109 399.1 279 75.3
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 7.2e-109 397.9 298 70.8
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 3.6e-108 395.6 260 75.8
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 6.1e-108 394.8 306 70.9
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 6.1e-108 394.8 227 86.8
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 8.0e-108 394.4 292 69.5
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 1.0e-107 394.0 279 72.4
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 1.0e-107 394.0 243 84.0
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 1.0e-107 394.0 289 72.7
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.4e-107 393.7 238 84.0
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.8e-107 393.3 260 75.4
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 1.8e-107 393.3 260 75.4
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 2.3e-107 392.9 236 83.5
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 3.0e-107 392.5 254 78.7
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 5.2e-107 391.7 241 80.1
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 5.2e-107 391.7 260 75.8
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 8.8e-107 391.0 291 71.8
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 1.5e-106 390.2 261 75.1
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 2.0e-106 389.8 241 80.5
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 2.0e-106 389.8 260 75.4
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 2.6e-106 389.4 261 75.1
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 3.3e-106 389.0 267 74.2
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 5.7e-106 388.3 260 75.0
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 7.5e-106 387.9 236 81.8
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 1.3e-105 387.1 260 75.0
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 2.8e-105 386.0 261 74.3
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 2.8e-105 386.0 230 84.8
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 2.0e-103 379.8 285 69.8
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 4.5e-103 378.6 234 82.5
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 1.7e-102 376.7 256 76.6
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 1.9e-101 373.2 311 67.5
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 5.5e-101 371.7 366 59.3
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 5.5e-101 371.7 299 70.2
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 7.2e-101 371.3 254 74.4
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 2.1e-100 369.8 242 76.9
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 3.6e-100 369.0 275 71.3
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 4.7e-100 368.6 281 67.3
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 1.2e-98 364.0 208 86.1
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 2.6e-98 362.8 208 87.0
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 2.6e-98 362.8 217 83.9
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 2.6e-98 362.8 235 77.4
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 9.8e-98 360.9 216 85.2
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 3.7e-97 359.0 251 71.3
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.8e-96 356.7 239 76.6
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 4.5e-95 352.1 248 74.2
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 1.0e-94 350.9 391 53.7
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 2.9e-94 349.4 300 63.7
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 1.1e-93 347.4 242 73.1
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 1.5e-93 347.1 254 70.5
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 4.0e-91 339.0 227 77.5
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 8.9e-91 337.8 306 63.7
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 1.2e-90 337.4 268 69.8
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 7.5e-90 334.7 227 74.4
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 1.3e-89 334.0 221 78.3
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.7e-89 333.6 289 62.3
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 2.2e-89 333.2 229 71.6
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 7.8e-87 324.7 193 84.5
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 9.5e-85 317.8 251 68.9
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 4.4e-82 308.9 200 77.5
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 7.5e-82 308.1 305 58.7
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 3.6e-76 289.3 247 64.0
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 2.3e-75 286.6 211 72.5
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 1.5e-74 283.9 243 63.0
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 1.2e-71 274.2 224 62.1
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 2.7e-71 273.1 172 76.7
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 3.3e-69 266.2 203 69.0
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 8.1e-68 261.5 199 71.9
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 2.4e-56 223.4 175 68.0
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 2.1e-55 220.3 177 61.0
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.1e-43 181.4 162 61.7
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.4e-43 180.3 161 61.5
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 9.9e-42 174.9 168 58.9
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 3.2e-40 169.9 116 76.7
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 4.2e-40 169.5 104 79.8
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 2.7e-31 140.2 239 43.9
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 6.7e-30 135.6 259 41.3
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 1.0e-25 121.7 184 45.1
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 1.7e-25 120.9 148 47.3
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 2.7e-23 113.6 116 57.8
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 6.1e-23 112.5 144 48.6
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 1.3e-20 104.8 66 71.2
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 4.8e-20 102.8 257 31.5
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 1.5e-18 97.8 56 80.4
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 1.3e-17 94.7 219 30.6
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 6.5e-17 92.4 62 71.0
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 2.5e-16 90.5 49 85.7
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 1.7e-12 77.8 88 59.1
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 7.7e-10 68.9 62 64.5
FAN13G2879 Fragaria x ananassa HOM05D005661 ORTHO05D046262 5.5e-08 62.8 189 33.3


User provided reference genes

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