Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 2.3e-33 145.2 84 100.0
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 3.4e-29 131.3 84 77.4
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 5.4e-27 124.0 62 88.7
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 9.2e-27 123.2 63 90.5
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 7.8e-26 120.2 62 87.1
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 8.6e-25 116.7 61 82.0
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 1.1e-24 116.3 62 88.7
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 1.5e-24 115.9 60 85.0
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 4.3e-24 114.4 62 87.1
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 5.6e-24 114.0 62 85.5
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 9.5e-24 113.2 61 83.6
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 1.2e-23 112.8 62 80.6
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 1.6e-23 112.5 62 80.6
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 2.1e-23 112.1 61 80.3
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 3.6e-23 111.3 62 85.5
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 3.6e-23 111.3 60 81.7
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 3.6e-23 111.3 60 81.7
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 3.6e-23 111.3 60 81.7
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 3.6e-23 111.3 60 81.7
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 4.7e-23 110.9 60 80.0
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 4.7e-23 110.9 61 82.0
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 6.2e-23 110.5 60 83.3
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 6.2e-23 110.5 60 81.7
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 1.1e-22 109.8 60 83.3
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 2.3e-22 108.6 62 82.3
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 3.1e-22 108.2 62 80.6
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 4.0e-22 107.8 56 83.9
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 5.2e-22 107.5 58 82.8
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 6.8e-22 107.1 60 78.3
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 1.2e-21 106.3 58 81.0
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 1.2e-21 106.3 61 77.0
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 2.6e-21 105.1 58 81.0
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 2.6e-21 105.1 58 81.0
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 2.6e-21 105.1 62 80.6
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 3.4e-21 104.8 62 79.0
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 3.4e-21 104.8 58 81.0
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 4.4e-21 104.4 56 80.4
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 4.4e-21 104.4 59 83.1
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 4.4e-21 104.4 62 75.8
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 7.5e-21 103.6 56 80.4
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 9.9e-21 103.2 62 77.4
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.3e-20 102.8 58 77.6
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 1.3e-20 102.8 62 77.4
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 1.7e-20 102.4 57 77.2
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 2.2e-20 102.1 61 78.7
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 2.2e-20 102.1 60 75.0
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 2.2e-20 102.1 62 77.4
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 2.2e-20 102.1 62 77.4
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 2.2e-20 102.1 62 77.4
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 2.9e-20 101.7 53 84.9
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 2.9e-20 101.7 58 79.3
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 4.9e-20 100.9 82 79.3
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 6.4e-20 100.5 54 81.5
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 8.3e-20 100.1 54 83.3
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 8.3e-20 100.1 62 77.4
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.4e-19 99.4 54 81.5
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 1.4e-19 99.4 82 73.2
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.9e-19 99.0 62 71.0
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.9e-19 99.0 58 75.9
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 2.4e-19 98.6 56 78.6
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 3.2e-19 98.2 62 69.4
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 3.2e-19 98.2 56 76.8
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 4.1e-19 97.8 62 69.4
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 7.1e-19 97.1 62 69.4
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 9.2e-19 96.7 62 69.4
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 9.2e-19 96.7 62 69.4
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 9.2e-19 96.7 62 67.7
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 1.2e-18 96.3 60 68.3
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 1.2e-18 96.3 62 67.7
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 2.1e-18 95.5 59 72.9
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 2.1e-18 95.5 59 72.9
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 2.1e-18 95.5 62 67.7
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 2.1e-18 95.5 56 76.8
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 2.7e-18 95.1 62 67.7
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 3.5e-18 94.7 62 66.1
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 4.6e-18 94.4 62 66.1
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.0e-17 93.2 48 85.4
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 1.7e-17 92.4 54 75.9
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 1.7e-17 92.4 54 75.9
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 1.7e-17 92.4 58 67.2
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 2.3e-17 92.0 58 69.0
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.3e-17 92.0 53 75.5
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 2.3e-17 92.0 58 72.4
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 3.0e-17 91.7 54 75.9
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 3.0e-17 91.7 47 87.2
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 5.1e-17 90.9 54 70.4
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 6.6e-17 90.5 56 76.8
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.1e-16 89.7 62 66.1
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 1.1e-16 89.7 54 74.1
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 1.5e-16 89.4 64 65.6
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 2.5e-16 88.6 56 73.2
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 2.5e-16 88.6 47 78.7
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 4.3e-16 87.8 64 65.6
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 7.3e-16 87.0 82 56.1
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 9.5e-16 86.7 51 72.5
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.2e-15 86.3 55 70.9
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 2.8e-15 85.1 46 80.4
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 2.4e-14 82.0 54 68.5
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 5.2e-14 80.9 62 61.3
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 8.9e-14 80.1 54 61.1
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 1.5e-13 79.3 44 75.0
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 2.0e-13 79.0 54 64.8
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 1.7e-12 75.9 58 58.6
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 2.4e-11 72.0 52 61.5
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 7.1e-11 70.5 37 81.1
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 1.6e-10 69.3 48 60.4
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 4.6e-10 67.8 47 59.6
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 5.1e-09 64.3 52 51.9
Os07g0175750 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 4.3e-08 61.2 40 65.0
Medtr2g036340 Medicago truncatula HOM05D005857 ORTHO05D007193 1.6e-07 59.3 58 48.3
Medtr8g046930 Medicago truncatula HOM05D005857 ORTHO05D007193 1.6e-07 59.3 58 48.3
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 2.8e-07 58.5 30 80.0
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 3.6e-07 58.2 54 48.1
Pp3c15_3960 Physcomitrium patens HOM05D005857 ORTHO05D007193 8.1e-07 57.0 54 46.3


User provided reference genes

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