Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 6.4e-196 687.2 335 100.0
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 1.1e-83 314.3 321 54.8
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 3.3e-83 312.8 319 54.2
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 6.2e-82 308.5 321 53.6
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.2e-82 308.5 322 53.4
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 8.0e-82 308.1 321 53.3
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.1e-81 307.8 323 53.9
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 1.4e-81 307.4 323 52.9
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.8e-81 307.0 321 53.6
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 4.0e-81 305.8 322 53.4
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 5.2e-81 305.4 320 53.1
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 5.2e-81 305.4 322 53.7
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 5.2e-81 305.4 321 53.0
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 5.2e-81 305.4 321 52.6
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 8.9e-81 304.7 276 60.1
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 8.9e-81 304.7 324 52.2
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.2e-80 304.3 322 52.5
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.0e-80 303.5 321 52.6
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 2.0e-80 303.5 320 52.8
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 2.6e-80 303.1 320 52.5
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 3.4e-80 302.8 319 52.4
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 4.4e-80 302.4 321 52.3
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 5.8e-80 302.0 318 52.8
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 5.8e-80 302.0 321 51.4
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 7.5e-80 301.6 319 52.7
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 7.5e-80 301.6 321 52.0
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 7.5e-80 301.6 321 52.0
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.8e-80 301.2 321 52.3
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 9.8e-80 301.2 321 51.4
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.3e-79 300.8 325 51.4
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.7e-79 300.4 321 52.3
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.7e-79 300.4 325 50.8
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 2.9e-79 299.7 331 52.0
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 4.9e-79 298.9 321 51.7
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 4.9e-79 298.9 333 52.0
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 6.4e-79 298.5 321 51.4
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 8.3e-79 298.1 321 51.7
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 8.3e-79 298.1 321 52.3
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 8.3e-79 298.1 319 51.1
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.1e-78 297.7 320 52.8
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 1.9e-78 297.0 321 51.4
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.9e-78 297.0 320 51.9
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 3.2e-78 296.2 324 51.2
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 3.2e-78 296.2 319 51.4
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 3.2e-78 296.2 328 51.8
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.1e-78 295.8 320 51.2
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 5.4e-78 295.4 320 51.9
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 7.0e-78 295.0 321 51.1
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 7.0e-78 295.0 321 51.1
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 9.2e-78 294.7 321 51.7
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 9.2e-78 294.7 321 50.5
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 1.6e-77 293.9 318 51.9
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.6e-77 293.9 321 51.1
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.6e-77 293.9 320 50.6
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 3.5e-77 292.7 321 50.8
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 7.8e-77 291.6 320 50.6
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.3e-76 290.8 320 50.6
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.3e-76 290.8 320 50.6
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 1.3e-76 290.8 331 49.8
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.3e-76 290.8 321 49.8
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 3.9e-76 289.3 321 50.2
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 8.6e-76 288.1 338 49.1
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 8.6e-76 288.1 318 50.9
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.1e-75 287.7 321 49.2
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.5e-75 287.3 320 49.7
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 9.5e-75 284.6 279 54.8
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.2e-74 284.3 321 49.8
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 3.6e-74 282.7 321 49.2
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 3.6e-74 282.7 321 49.5
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.1e-73 281.2 321 49.2
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 1.4e-73 280.8 321 49.2
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 1.4e-73 280.8 321 49.2
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 1.8e-73 280.4 320 49.4
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 2.3e-73 280.0 321 48.9
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.1e-73 279.6 321 48.9
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 3.1e-73 279.6 321 48.9
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.1e-73 279.6 318 50.0
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 4.0e-73 279.3 319 48.9
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 4.0e-73 279.3 319 48.3
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 4.0e-73 279.3 328 49.4
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 4.0e-73 279.3 322 48.8
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 5.2e-73 278.9 320 49.1
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 8.9e-73 278.1 320 48.8
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 2.6e-72 276.6 321 48.3
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 4.4e-72 275.8 321 48.0
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 7.5e-72 275.0 318 49.4
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 6.4e-71 271.9 320 47.2
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.1e-70 271.2 320 48.4
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.4e-70 270.8 320 47.8
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 2.7e-69 266.5 331 47.1
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.5e-69 266.2 274 52.6
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 6.0e-69 265.4 321 47.4
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 8.1e-66 255.0 292 49.3
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 4.0e-65 252.7 277 49.8
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 1.0e-60 238.0 320 43.8
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.7e-60 237.3 131 84.0
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 6.6e-60 235.3 282 47.5
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 5.2e-57 225.7 174 63.2
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 9.0e-49 198.4 293 41.6
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.4e-46 189.1 117 78.6
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 5.4e-46 189.1 255 45.9
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 9.3e-38 161.8 294 35.4
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.0e-31 141.7 271 32.1
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 3.5e-29 133.3 124 54.8
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.1e-22 111.7 103 56.3
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.9e-22 110.9 70 71.4
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.9e-22 110.9 102 57.8
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 8.8e-20 102.1 137 46.0
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.4e-09 68.2 54 68.5


User provided reference genes

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