Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 4.3e-105 384.8 213 100.0
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.4e-68 263.5 212 75.9
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 2.1e-51 206.5 231 58.9
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 2.7e-51 206.1 229 59.4
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 3.6e-51 205.7 248 53.6
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 3.6e-51 205.7 236 58.1
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 3.0e-50 202.6 247 53.0
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 3.0e-50 202.6 251 55.4
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 3.3e-49 199.1 231 55.4
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 4.4e-49 198.7 230 57.4
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 1.3e-48 197.2 238 56.3
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.9e-45 186.0 232 54.3
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 2.9e-45 186.0 232 54.3
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 5.0e-45 185.3 232 54.3
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 7.2e-44 181.4 232 51.7
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 1.6e-43 180.3 218 55.0
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 3.6e-43 179.1 236 50.0
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.6e-43 179.1 235 52.3
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.0e-42 176.0 236 52.5
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 4.0e-42 175.6 245 52.2
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 1.2e-41 174.1 209 55.5
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 1.7e-40 170.2 235 51.9
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 4.8e-40 168.7 222 54.5
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 8.3e-40 167.9 237 52.3
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 1.4e-39 167.2 230 53.0
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 3.1e-39 166.0 227 51.5
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 4.1e-39 165.6 227 51.5
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 4.1e-39 165.6 247 50.6
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 2.0e-38 163.3 210 51.0
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 2.7e-38 162.9 237 47.7
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 3.5e-38 162.5 224 50.9
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 1.0e-37 161.0 227 48.9
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.0e-37 161.0 235 48.9
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.0e-37 161.0 237 47.7
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 1.7e-37 160.2 243 49.0
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 5.0e-37 158.7 199 55.3
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 3.2e-36 156.0 229 50.7
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 5.5e-36 155.2 218 50.0
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 9.4e-36 154.5 259 46.3
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.2e-35 154.1 226 49.6
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 2.1e-35 153.3 252 46.0
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 8.0e-35 151.4 242 45.9
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 1.4e-34 150.6 228 50.4
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 1.8e-34 150.2 231 50.2
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 1.8e-34 150.2 185 54.1
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 5.2e-34 148.7 246 45.5
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.2e-33 147.5 234 49.1
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.2e-33 147.5 221 48.9
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 2.0e-33 146.7 214 50.9
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 3.4e-33 146.0 245 45.7
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 9.8e-33 144.4 219 49.8
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 2.8e-32 142.9 258 43.0
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 6.3e-32 141.7 220 50.0
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 8.3e-32 141.4 224 48.7
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 1.1e-31 141.0 214 47.7
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 1.4e-31 140.6 144 60.4
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 1.8e-31 140.2 217 47.9
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 2.4e-31 139.8 277 41.9
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 7.0e-31 138.3 220 50.0
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 2.7e-30 136.3 209 47.4
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 2.9e-29 132.9 231 46.8
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 1.1e-28 131.0 213 48.4
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 3.3e-28 129.4 224 47.8
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 3.6e-27 125.9 197 48.2
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 6.8e-26 121.7 264 38.3
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.0e-25 120.2 220 43.6
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 7.5e-25 118.2 254 41.7
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 3.7e-24 115.9 256 41.4
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.8e-23 113.6 225 43.1
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 3.2e-23 112.8 215 42.8
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 7.0e-23 111.7 238 38.7
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 3.9e-21 105.9 108 57.4
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 5.0e-21 105.5 206 42.2
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 1.9e-20 103.6 269 35.7
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 2.5e-20 103.2 223 41.7
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 7.3e-20 101.7 169 48.5
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 8.9e-18 94.7 234 38.0
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 1.5e-17 94.0 175 44.0
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 9.8e-17 91.3 224 38.4
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 9.8e-17 91.3 208 41.8
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 1.3e-16 90.9 224 38.8
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 2.2e-16 90.1 295 34.6
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 3.7e-16 89.4 204 39.7
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 6.4e-16 88.6 213 39.4
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 1.1e-15 87.8 120 54.2
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 6.0e-14 82.0 212 37.3
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 3.9e-13 79.3 222 34.7
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 6.6e-13 78.6 195 35.9
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 6.6e-13 78.6 270 29.6
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 1.5e-12 77.4 195 34.9
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 2.5e-12 76.6 173 38.7
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 2.5e-12 76.6 173 38.7
Zm00001eb202050 Zea mays HOM05D007616 ORTHO05D008751 4.7e-11 72.4 264 30.7
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 1.4e-10 70.9 207 30.0
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 1.8e-10 70.5 207 29.5
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 1.8e-10 70.5 207 30.0
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 5.2e-10 68.9 261 31.0
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 1.2e-09 67.8 204 32.4
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.5e-09 67.4 101 46.5
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 2.6e-09 66.6 203 34.0
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 3.4e-09 66.2 201 31.8
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 3.4e-09 66.2 196 31.6
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 5.8e-09 65.5 133 45.1
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 5.8e-09 65.5 126 42.9
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 5.8e-09 65.5 126 42.9
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 5.8e-09 65.5 200 31.5
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 5.8e-09 65.5 201 33.8
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 5.8e-09 65.5 205 32.7
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 9.8e-09 64.7 113 45.1
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 1.3e-08 64.3 194 30.9
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.3e-08 64.3 195 32.3
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 2.9e-08 63.2 206 30.6
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 6.4e-08 62.0 203 30.0
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 8.3e-08 61.6 51 58.8
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 1.4e-07 60.8 209 31.1
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 1.9e-07 60.5 205 31.7
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 3.2e-07 59.7 195 30.3
Dinv31838 Davidia involucrata HOM05D002661 ORTHO05D002786 4.1e-07 59.3 215 27.4
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 4.1e-07 59.3 207 31.4
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 7.1e-07 58.5 209 30.6
CAN.G1735.2 Capsicum annuum HOM05D002661 ORTHO05D002786 9.2e-07 58.2 205 28.8
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 9.2e-07 58.2 200 33.0
Gohir.A05G257100 Gossypium hirsutum HOM05D002661 ORTHO05D002786 9.2e-07 58.2 210 29.0
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 9.2e-07 58.2 202 31.2
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 1.6e-06 57.4 205 29.3
HanXRQChr14g0430361 Helianthus annuus HOM05D002661 ORTHO05D002786 1.6e-06 57.4 190 28.9
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.6e-06 57.4 96 51.0
BraA09t37484Z Brassica rapa HOM05D012662 ORTHO05D008751 2.7e-06 56.6 97 42.3
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 3.5e-06 56.2 201 29.9
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 3.5e-06 56.2 199 29.6
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 4.6e-06 55.8 205 28.8
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 4.6e-06 55.8 230 33.0
Sabra05G0184300 Salix brachista HOM05D002661 ORTHO05D002786 4.6e-06 55.8 200 31.5
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 6.0e-06 55.5 197 31.5
Migut.C00825 Erythranthe guttata HOM05D002661 ORTHO05D002786 6.0e-06 55.5 223 27.8
Gohir.D05G258600 Gossypium hirsutum HOM05D002661 ORTHO05D002786 6.0e-06 55.5 218 29.8
Thecc.08G043600 Theobroma cacao HOM05D002661 ORTHO05D002786 6.0e-06 55.5 202 29.7


User provided reference genes

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