Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 6.1e-42 173.7 86 100.0
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 1.0e-17 93.2 80 63.8
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.8e-17 92.4 87 65.5
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 2.6e-16 88.6 86 55.8
Oeu062790.1 Olea europaea HOM05D002165 ORTHO05D001531 1.3e-15 86.3 82 64.6
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 2.2e-15 85.5 87 58.6
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 3.7e-15 84.7 79 60.8
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 7.7e-13 77.0 78 60.3
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 1.0e-12 76.6 78 53.8
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 1.0e-12 76.6 78 53.8
Oeu062782.1 Olea europaea HOM05D002165 ORTHO05D001531 1.3e-12 76.3 79 59.5
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-12 75.5 71 59.2
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-12 75.5 71 59.2
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-12 75.5 71 59.2
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 5.0e-12 74.3 72 58.3
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 6.6e-12 73.9 70 55.7
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 1.5e-11 72.8 73 57.5
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 4.2e-11 71.2 84 51.2
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 9.5e-11 70.1 61 63.9
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 1.2e-10 69.7 86 50.0
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 1.6e-10 69.3 76 53.9
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 1.6e-10 69.3 86 48.8
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 2.1e-10 68.9 86 50.0
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 2.1e-10 68.9 72 45.8
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.8e-10 68.6 72 55.6
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 6.1e-10 67.4 72 52.8
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 6.1e-10 67.4 72 52.8
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 6.1e-10 67.4 76 48.7
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 6.1e-10 67.4 76 48.7
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 8.0e-10 67.0 73 49.3
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.0e-09 66.6 75 49.3
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 1.8e-09 65.9 88 48.9
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 3.0e-09 65.1 72 52.8
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.0e-09 64.7 73 52.1
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 4.0e-09 64.7 88 48.9
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.2e-09 64.3 73 50.7
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 5.2e-09 64.3 72 54.2
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 6.8e-09 63.9 64 54.7
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 6.8e-09 63.9 82 53.7
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 8.9e-09 63.5 61 55.7
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 1.2e-08 63.2 79 51.9
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.2e-08 63.2 72 47.2
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.0e-08 62.4 72 50.0
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.0e-08 62.4 72 50.0
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 2.0e-08 62.4 71 50.7
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 2.0e-08 62.4 71 50.7
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 2.6e-08 62.0 62 61.3
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 2.6e-08 62.0 75 46.7
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 2.6e-08 62.0 87 46.0
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 2.6e-08 62.0 76 48.7
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 3.4e-08 61.6 77 48.1
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 3.4e-08 61.6 70 50.0
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.4e-08 61.6 73 52.1
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.4e-08 61.6 73 52.1
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 3.4e-08 61.6 73 52.1
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 3.4e-08 61.6 75 48.0
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 3.4e-08 61.6 71 50.7
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 3.4e-08 61.6 72 45.8
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.4e-08 61.2 73 49.3
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 4.4e-08 61.2 72 48.6
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 4.4e-08 61.2 71 52.1
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.7e-08 60.8 75 50.7
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.7e-08 60.8 72 52.8
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.7e-08 60.8 72 52.8
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 5.7e-08 60.8 72 50.0
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.5e-08 60.5 72 52.8
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 7.5e-08 60.5 70 50.0
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 7.5e-08 60.5 69 47.8
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 7.5e-08 60.5 70 47.1
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 7.5e-08 60.5 70 47.1
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 7.5e-08 60.5 70 48.6
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 7.5e-08 60.5 72 50.0
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 7.5e-08 60.5 72 50.0
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 7.5e-08 60.5 70 50.0
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 9.8e-08 60.1 65 53.8
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 9.8e-08 60.1 63 49.2
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.3e-07 59.7 75 49.3
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 1.3e-07 59.7 71 49.3
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 1.3e-07 59.7 71 56.3
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 1.7e-07 59.3 72 54.2
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.7e-07 59.3 64 50.0
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 1.7e-07 59.3 69 46.4
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.7e-07 59.3 72 48.6
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 1.7e-07 59.3 71 49.3
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 1.7e-07 59.3 71 49.3
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 1.7e-07 59.3 71 54.9
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.2e-07 58.9 71 53.5
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.2e-07 58.9 71 53.5
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.2e-07 58.9 71 53.5
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 2.2e-07 58.9 72 50.0
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 2.2e-07 58.9 72 50.0
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 2.2e-07 58.9 62 51.6
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 2.2e-07 58.9 72 43.1
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 2.2e-07 58.9 72 43.1
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 2.2e-07 58.9 63 50.8
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 2.8e-07 58.5 71 49.3
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 2.8e-07 58.5 71 47.9
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 2.8e-07 58.5 71 47.9
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 2.8e-07 58.5 72 48.6
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 2.8e-07 58.5 72 50.0
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.7e-07 58.2 70 50.0
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.7e-07 58.2 72 51.4
Eucgr.L03552 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.7e-07 58.2 72 45.8
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 3.7e-07 58.2 72 50.0
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 3.7e-07 58.2 72 50.0
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 3.7e-07 58.2 70 48.6
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 3.7e-07 58.2 64 50.0
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 4.9e-07 57.8 68 50.0
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.9e-07 57.8 73 49.3
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.9e-07 57.8 72 51.4
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 4.9e-07 57.8 69 47.8
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 6.3e-07 57.4 67 43.3
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 6.3e-07 57.4 71 47.9
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.3e-07 57.4 72 50.0
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 6.3e-07 57.4 71 47.9
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 6.3e-07 57.4 72 41.7
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 6.3e-07 57.4 72 50.0
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 6.3e-07 57.4 70 44.3
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 8.3e-07 57.0 79 49.4
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 8.3e-07 57.0 71 47.9
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.3e-07 57.0 72 47.2
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.3e-07 57.0 72 47.2
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.1e-06 56.6 70 48.6
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.1e-06 56.6 72 50.0
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-06 56.6 70 51.4
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.4e-06 56.2 74 47.3
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 1.4e-06 56.2 71 52.1
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.4e-06 56.2 71 52.1
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 1.4e-06 56.2 63 50.8
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.8e-06 55.8 79 46.8
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 1.8e-06 55.8 71 50.7
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-06 55.5 73 46.6
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 2.4e-06 55.5 84 42.9
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 2.4e-06 55.5 65 49.2
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.1e-06 55.1 72 44.4
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 3.1e-06 55.1 71 45.1
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 3.1e-06 55.1 71 45.1
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 3.1e-06 55.1 72 41.7
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-06 55.1 72 47.2
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.1e-06 54.7 73 49.3
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 4.1e-06 54.7 71 45.1
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 4.1e-06 54.7 72 54.2
Rhsim05G0122900 Rhododendron simsii HOM05D002165 ORTHO05D001531 5.4e-06 54.3 52 59.6
Actinidia01661 Actinidia chinensis HOM05D001662 ORTHO05D007520 7.0e-06 53.9 59 55.9
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.0e-06 53.9 72 48.6
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 7.0e-06 53.9 71 42.3
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 7.0e-06 53.9 71 42.3
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 7.0e-06 53.9 69 47.8
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 7.0e-06 53.9 72 54.2
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 7.0e-06 53.9 72 54.2
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.2e-06 53.5 71 45.1
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 9.2e-06 53.5 65 50.8
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 9.2e-06 53.5 62 46.8


User provided reference genes

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