Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000100.1 Olea europaea HOM05D003412 ORTHO05D003962 3.3e-134 481.9 269 100.0
Oeu036644.1 Olea europaea HOM05D003412 ORTHO05D003962 2.1e-117 426.0 269 86.6
Hma1.2p1_3304F.1_g335080 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 7.3e-102 374.4 272 77.9
PGSC0003DMG400018247 Solanum tuberosum HOM05D003412 ORTHO05D003962 1.1e-100 370.5 271 75.6
MSTRG.27914 Avicennia marina HOM05D003412 ORTHO05D003962 3.1e-100 369.0 272 76.5
Actinidia16911 Actinidia chinensis HOM05D003412 ORTHO05D003962 9.0e-100 367.5 272 75.0
MSTRG.5167 Avicennia marina HOM05D003412 ORTHO05D003962 1.5e-99 366.7 271 76.0
CAN.G1248.24 Capsicum annuum HOM05D003412 ORTHO05D003962 1.5e-99 366.7 271 75.3
Thecc.05G329000 Theobroma cacao HOM05D003412 ORTHO05D003962 7.6e-99 364.4 272 76.8
Sopen01g044580 Solanum pennellii HOM05D003412 ORTHO05D003962 1.7e-98 363.2 271 74.5
Duzib177G0752 Durio zibethinus HOM05D003412 ORTHO05D003962 2.9e-98 362.5 272 76.5
Hma1.2p1_0052F.1_g030415 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 3.8e-98 362.1 281 74.7
Nn4g25397 Nelumbo nucifera HOM05D003412 ORTHO05D003962 6.4e-98 361.3 271 76.4
Atru.chr12.1551 Acer truncatum HOM05D003412 ORTHO05D003962 5.4e-97 358.2 271 75.3
Rhsim11G0101900 Rhododendron simsii HOM05D003412 ORTHO05D003962 7.1e-97 357.8 271 73.8
Duzib128G1566 Durio zibethinus HOM05D003412 ORTHO05D003962 1.2e-96 357.1 272 75.0
MSTRG.16423 Avicennia marina HOM05D003412 ORTHO05D003962 1.6e-96 356.7 274 75.5
Solyc01g101130.3 Solanum lycopersicum HOM05D003412 ORTHO05D003962 6.0e-96 354.8 271 73.8
vmacro01603 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 7.9e-96 354.4 270 72.6
Lj5A319T47 Lonicera japonica HOM05D003412 ORTHO05D003962 1.8e-95 353.2 275 72.7
CiPaw.07G035400 Carya illinoinensis HOM05D003412 ORTHO05D003962 3.0e-95 352.4 272 73.9
Cc02_g35780 Coffea canephora HOM05D003412 ORTHO05D003962 3.0e-95 352.4 272 73.5
SalBow1G0001 Salvia bowleyana HOM05D003412 ORTHO05D003962 1.9e-94 349.7 273 72.9
Cpa.g.sc48.220 Carica papaya HOM05D003412 ORTHO05D003962 3.3e-94 349.0 272 72.8
Sabra13G0002900 Salix brachista HOM05D003412 ORTHO05D003962 3.3e-94 349.0 273 73.3
CiPaw.08G150800 Carya illinoinensis HOM05D003412 ORTHO05D003962 7.4e-94 347.8 272 73.9
Peaxi162Scf00357g00017 Petunia axillaris HOM05D003412 ORTHO05D003962 7.4e-94 347.8 288 69.4
Nitab4.5_0014791g0020 Nicotiana tabacum HOM05D003412 ORTHO05D003962 1.3e-93 347.1 289 70.6
GSVIVG01031318001 Vitis vinifera HOM05D003412 ORTHO05D003962 1.3e-93 347.1 272 73.2
Gohir.D13G116700 Gossypium hirsutum HOM05D003412 ORTHO05D003962 2.1e-93 346.3 272 73.9
Gorai.013G131200 Gossypium raimondii HOM05D003412 ORTHO05D003962 2.1e-93 346.3 272 73.9
VMungo0720G0630 Vigna mungo HOM05D003412 ORTHO05D003962 2.1e-93 346.3 274 71.2
Phvul.007G204500 Phaseolus vulgaris HOM05D003412 ORTHO05D003962 1.1e-92 344.0 274 70.8
Prupe.6G305600 Prunus persica HOM05D003412 ORTHO05D003962 1.4e-92 343.6 271 73.1
Nitab4.5_0001931g0010 Nicotiana tabacum HOM05D003412 ORTHO05D003962 2.4e-92 342.8 293 67.9
TPR.G2623 Trifolium pratense HOM05D003412 ORTHO05D003962 2.4e-92 342.8 273 70.0
RcHm_v2.0_Chr3g0458381 Rosa chinensis HOM05D003412 ORTHO05D003962 4.0e-92 342.0 272 70.6
Sc16g0009380 Simmondsia chinensis HOM05D003412 ORTHO05D003962 4.0e-92 342.0 272 70.6
Eucgr.H01317 Eucalyptus grandis HOM05D003412 ORTHO05D003962 9.0e-92 340.9 275 70.5
Gohir.A13G113600 Gossypium hirsutum HOM05D003412 ORTHO05D003962 1.2e-91 340.5 272 72.8
Glyma.10G144000 Glycine max HOM05D003412 ORTHO05D003962 3.4e-91 339.0 274 70.8
Oeu061921.1 Olea europaea HOM05D003412 ORTHO05D003962 7.6e-91 337.8 272 72.8
PSO210G2054 Papaver somniferum HOM05D003412 ORTHO05D003962 2.2e-90 336.3 272 68.8
Rhsim05G0121800 Rhododendron simsii HOM05D003412 ORTHO05D003962 2.9e-90 335.9 272 69.9
DCAR_025305 Daucus carota HOM05D003412 ORTHO05D003962 3.8e-90 335.5 272 69.5
PSO761G0645 Papaver somniferum HOM05D003412 ORTHO05D003962 4.9e-90 335.1 272 68.8
CANSAT54G2189 Cannabis sativa HOM05D003412 ORTHO05D003962 8.4e-90 334.3 280 68.2
PGR083G2508 Punica granatum HOM05D003412 ORTHO05D003962 3.2e-89 332.4 273 68.5
Lalb_Chr06g0167331 Lupinus albus HOM05D003412 ORTHO05D003962 5.5e-89 331.6 272 68.0
FAN09G0161 Fragaria x ananassa HOM05D003412 ORTHO05D003962 7.1e-89 331.3 272 69.9
Ciclev10012076m.g Citrus clementina HOM05D003412 ORTHO05D003962 9.3e-89 330.9 272 71.0
COL.COLO4_05512 Corchorus olitorius HOM05D003412 ORTHO05D003962 9.3e-89 330.9 272 71.0
arahy.Tifrunner.gnm1.ann1.WSUD3I Arachis hypogaea HOM05D003412 ORTHO05D003962 2.1e-88 329.7 276 68.5
Nn3g21904 Nelumbo nucifera HOM05D003412 ORTHO05D003962 3.5e-88 328.9 270 68.5
MELO3C004154.2 Cucumis melo HOM05D003412 ORTHO05D003962 4.6e-88 328.6 274 68.6
SGA_v2.0_scaffold117G32404 Striga asiatica HOM05D003412 ORTHO05D003962 1.8e-87 326.6 275 69.8
MD12G1200500 Malus domestica HOM05D003412 ORTHO05D003962 8.7e-87 324.3 271 69.7
Haze_03996 Corylus avellana HOM05D003412 ORTHO05D003962 2.5e-86 322.8 272 69.1
CsaV3_2G007300 Cucumis sativus L. HOM05D003412 ORTHO05D003962 4.3e-86 322.0 267 68.9
Hund07273 Selenicereus undatus HOM05D003412 ORTHO05D003962 4.3e-86 322.0 270 67.4
Lj5g0005042 Lotus japonicus HOM05D003412 ORTHO05D003962 7.4e-86 321.2 274 67.2
arahy.Tifrunner.gnm1.ann1.LCTE14 Arachis hypogaea HOM05D003412 ORTHO05D003962 2.8e-85 319.3 276 67.0
MD04G1187100 Malus domestica HOM05D003412 ORTHO05D003962 2.8e-85 319.3 271 69.7
EL10Ac4g09549 Beta vulgaris HOM05D003412 ORTHO05D003962 8.1e-85 317.8 272 66.2
Eucgr.B01817 Eucalyptus grandis HOM05D003412 ORTHO05D003962 1.4e-84 317.0 274 66.1
Migut.B00877 Erythranthe guttata HOM05D003412 ORTHO05D003962 4.0e-84 315.5 274 66.8
Zm00001eb417390 Zea mays HOM05D003412 ORTHO05D003962 5.3e-84 315.1 274 65.3
Os05g0135900 Oryza sativa ssp. japonica HOM05D003412 ORTHO05D003962 6.9e-84 314.7 272 65.8
Carub.0006s2442 Capsella rubella HOM05D003412 ORTHO05D003962 1.5e-83 313.5 272 64.3
Hund07277 Selenicereus undatus HOM05D003412 ORTHO05D003962 2.0e-83 313.2 270 66.3
Lsat_1_v5_gn_9_77100 Lactuca sativa HOM05D003412 ORTHO05D003962 2.6e-83 312.8 274 67.2
Sabra05G0015000 Salix brachista HOM05D003412 ORTHO05D003962 1.0e-82 310.8 273 66.7
THA.LOC104818749 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 1.0e-82 310.8 275 63.6
Ah.06g190650 Amaranthus hybridus HOM05D003412 ORTHO05D003962 1.3e-82 310.5 259 66.8
Glyma.20G092900 Glycine max HOM05D003412 ORTHO05D003962 1.7e-82 310.1 274 66.4
GSVIVG01028212001 Vitis vinifera HOM05D003412 ORTHO05D003962 3.8e-82 308.9 272 64.7
Sed0023403 Sechium edule HOM05D003412 ORTHO05D003962 6.5e-82 308.1 273 66.7
FAN14G3569 Fragaria x ananassa HOM05D003412 ORTHO05D003962 1.9e-81 306.6 272 66.2
Aqoxy2G02528 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 5.5e-81 305.1 272 66.5
ClCG02G014670 Citrullus lanatus HOM05D003412 ORTHO05D003962 9.3e-81 304.3 274 65.3
FvH4_6g08410 Fragaria vesca HOM05D003412 ORTHO05D003962 1.2e-80 303.9 272 65.8
ECA236G3082 Erigeron canadensis HOM05D003412 ORTHO05D003962 2.7e-80 302.8 275 64.4
Dinv24506 Davidia involucrata HOM05D003412 ORTHO05D003962 7.9e-80 301.2 272 66.9
SGA_v2.0_scaffold279G46784 Striga asiatica HOM05D003412 ORTHO05D003962 1.8e-79 300.1 276 65.6
DCAR_029287 Daucus carota HOM05D003412 ORTHO05D003962 6.7e-79 298.1 273 61.9
HanXRQChr03g0088701 Helianthus annuus HOM05D003412 ORTHO05D003962 1.1e-78 297.4 229 72.1
Sabra05G0000900 Salix brachista HOM05D003412 ORTHO05D003962 2.8e-77 292.7 273 63.7
AUR62006809 Chenopodium quinoa HOM05D003412 ORTHO05D003962 3.7e-77 292.4 273 61.9
Lju99C6G3 Lonicera japonica HOM05D003412 ORTHO05D003962 6.3e-77 291.6 253 65.2
vmacro19768 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 6.3e-77 291.6 272 63.2
AUR62000468 Chenopodium quinoa HOM05D003412 ORTHO05D003962 8.2e-77 291.2 273 61.9
Lalb_Chr21g0310081 Lupinus albus HOM05D003412 ORTHO05D003962 2.4e-76 289.7 272 62.5
CDE08G0751 Ceratophyllum demersum HOM05D003412 ORTHO05D003962 4.5e-75 285.4 273 59.0
Aa31LG11G9870 Aethionema arabicum HOM05D003412 ORTHO05D003962 1.3e-74 283.9 274 60.9
AT5G26770 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 1.4e-73 280.4 295 58.0
Hund21837 Selenicereus undatus HOM05D003412 ORTHO05D003962 1.4e-73 280.4 246 62.6
THA.LOC104821745 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 3.2e-73 279.3 325 52.0
unitig_22.g5801 Utricularia gibba HOM05D003412 ORTHO05D003962 9.3e-73 277.7 272 60.3
BcaNung03675 Brassica carinata HOM05D003412 ORTHO05D003962 2.7e-72 276.2 272 58.8
MBI19_g32732_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 3.6e-72 275.8 267 61.8
TAR362G0077 Trochodendron aralioides HOM05D003412 ORTHO05D003962 6.1e-72 275.0 272 61.4
MBI18_g09639_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 7.9e-72 274.6 272 60.7
SEGI_01307 Sequoiadendron giganteum HOM05D003412 ORTHO05D003962 1.3e-71 273.9 271 56.8
ATR0796G311 Amborella trichopoda HOM05D003412 ORTHO05D003962 8.7e-71 271.2 272 59.2
TAR365G0905 Trochodendron aralioides HOM05D003412 ORTHO05D003962 1.1e-70 270.8 208 72.6
CARHR080290 Cardamine hirsuta HOM05D003412 ORTHO05D003962 2.5e-70 269.6 274 58.0
A06p37010 Brassica napus HOM05D003412 ORTHO05D003962 4.3e-70 268.9 272 58.8
Thhalv10008143m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 2.8e-69 266.2 272 55.9
Actinidia01664 Actinidia chinensis HOM05D003412 ORTHO05D003962 3.7e-69 265.8 272 61.8
CARHR009430 Cardamine hirsuta HOM05D003412 ORTHO05D003962 4.8e-69 265.4 272 55.5
Sed0017632 Sechium edule HOM05D003412 ORTHO05D003962 6.3e-69 265.0 274 59.1
Oeu029183.1 Olea europaea HOM05D003412 ORTHO05D003962 4.5e-67 258.8 193 74.6
THA.LOC104816843 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 4.5e-67 258.8 272 55.9
BraA06t26626Z Brassica rapa HOM05D003412 ORTHO05D003962 7.7e-67 258.1 289 55.4
Sp1g08080 Schrenkiella parvula HOM05D003412 ORTHO05D003962 1.7e-66 256.9 272 54.4
Zm00001eb354610 Zea mays HOM05D003412 ORTHO05D003962 2.9e-66 256.1 219 65.8
arahy.Tifrunner.gnm1.ann1.36CNLM Arachis hypogaea HOM05D003412 ORTHO05D003962 6.5e-66 255.0 273 57.5
BcaC04g23636 Brassica carinata HOM05D003412 ORTHO05D003962 8.5e-66 254.6 272 57.0
BcaNung03912 Brassica carinata HOM05D003412 ORTHO05D003962 1.9e-65 253.4 272 56.6
Lalb_Chr04g0260311 Lupinus albus HOM05D003412 ORTHO05D003962 2.5e-65 253.1 271 58.7
Carub.0001s0882 Capsella rubella HOM05D003412 ORTHO05D003962 5.5e-65 251.9 272 53.3
HPP92_026058 Vanilla planifolia HOM05D003412 ORTHO05D003962 2.1e-64 250.0 271 55.4
Lj9C230G11 Lonicera japonica HOM05D003412 ORTHO05D003962 2.7e-64 249.6 253 58.5
arahy.Tifrunner.gnm1.ann1.D23GS1 Arachis hypogaea HOM05D003412 ORTHO05D003962 5.1e-63 245.4 273 55.7
Migut.N00969 Erythranthe guttata HOM05D003412 ORTHO05D003962 8.8e-63 244.6 273 57.9
Ca_10195_v3 Cicer arietinum L. HOM05D003412 ORTHO05D003962 1.1e-62 244.2 273 56.4
BolC9t53547H Brassica oleracea HOM05D003412 ORTHO05D003962 2.2e-61 240.0 279 52.7
Dinv30940 Davidia involucrata HOM05D003412 ORTHO05D003962 8.2e-61 238.0 155 83.9
TWI56G0029 Tripterygium wilfordii HOM05D003412 ORTHO05D003962 8.2e-61 238.0 272 56.2
Hma1.2p1_3841F.1_g337660 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 1.2e-59 234.2 236 62.7
Aa31LG1G5630 Aethionema arabicum HOM05D003412 ORTHO05D003962 2.6e-59 233.0 270 51.5
FAN05G5683 Fragaria x ananassa HOM05D003412 ORTHO05D003962 4.5e-59 232.3 272 54.8
Aqoxy5G02790 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 5.9e-59 231.9 272 53.3
Rhsim11G0101700 Rhododendron simsii HOM05D003412 ORTHO05D003962 1.3e-58 230.7 180 69.4
TAR365G0256 Trochodendron aralioides HOM05D003412 ORTHO05D003962 1.7e-58 230.3 270 54.8
TAR636G2549 Trochodendron aralioides HOM05D003412 ORTHO05D003962 2.9e-58 229.6 272 55.1
Potri.013G003400 Populus trichocarpa HOM05D003412 ORTHO05D003962 5.5e-57 225.3 156 76.3
AL1G19990 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 9.4e-57 224.6 222 55.9
AT1G09470 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 1.6e-56 223.8 236 55.1
Medtr1g484830 Medicago truncatula HOM05D003412 ORTHO05D003962 4.7e-56 222.2 157 75.2
BraA09t36208Z Brassica rapa HOM05D003412 ORTHO05D003962 1.8e-55 220.3 283 50.5
C05p07470 Brassica napus HOM05D003412 ORTHO05D003962 2.3e-55 219.9 273 50.2
Manes.08G107900 Manihot esculenta HOM05D003412 ORTHO05D003962 8.8e-55 218.0 273 53.1
Potri.005G003600 Populus trichocarpa HOM05D003412 ORTHO05D003962 8.8e-55 218.0 273 52.0
C07p41480 Brassica napus HOM05D003412 ORTHO05D003962 1.5e-54 217.2 272 50.4
BolC7t44681H Brassica oleracea HOM05D003412 ORTHO05D003962 1.5e-54 217.2 272 50.4
BraA06t23830Z Brassica rapa HOM05D003412 ORTHO05D003962 2.0e-54 216.9 273 50.5
Psat6g155400 Pisum sativum HOM05D003412 ORTHO05D003962 2.0e-54 216.9 273 52.4
AL6G38640 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 7.4e-54 214.9 272 50.7
Sp2g21210 Schrenkiella parvula HOM05D003412 ORTHO05D003962 7.4e-54 214.9 157 73.2
QL03p010236 Quercus lobata HOM05D003412 ORTHO05D003962 1.7e-53 213.8 271 52.0
Manes.09G180600 Manihot esculenta HOM05D003412 ORTHO05D003962 2.8e-53 213.0 273 53.1
PSO357G0133 Papaver somniferum HOM05D003412 ORTHO05D003962 3.7e-53 212.6 216 58.8
CARHR186800 Cardamine hirsuta HOM05D003412 ORTHO05D003962 4.8e-53 212.2 272 50.4
A06p06180 Brassica napus HOM05D003412 ORTHO05D003962 8.2e-53 211.5 274 49.3
QL03p010471 Quercus lobata HOM05D003412 ORTHO05D003962 1.1e-52 211.1 271 51.7
Thhalv10004552m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 3.1e-52 209.5 272 51.1
A09p05660 Brassica napus HOM05D003412 ORTHO05D003962 3.8e-50 202.6 273 50.2
C09p06270 Brassica napus HOM05D003412 ORTHO05D003962 1.9e-49 200.3 269 48.7
BolC5t29502H Brassica oleracea HOM05D003412 ORTHO05D003962 2.5e-49 199.9 273 46.9
Carub.0003s0519 Capsella rubella HOM05D003412 ORTHO05D003962 1.8e-47 193.7 273 47.3
CSS0037128 Camellia sinensis var. sinensis HOM05D003412 ORTHO05D003962 2.3e-47 193.4 179 63.1
CDE02G2375 Ceratophyllum demersum HOM05D000427 ORTHO05D000386 2.6e-46 189.9 271 43.9
Thhalv10021934m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 4.4e-46 189.1 158 65.8
PGR031G1608 Punica granatum HOM05D003412 ORTHO05D003962 4.4e-46 189.1 309 43.7
BcaB04g19713 Brassica carinata HOM05D003412 ORTHO05D003962 2.2e-45 186.8 272 46.3
AL3G16570 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 4.8e-45 185.7 273 46.5
AT3G05830 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 4.8e-45 185.7 273 46.9
C05p61450 Brassica napus HOM05D003412 ORTHO05D003962 6.3e-45 185.3 273 45.4
Aa31LG5G16210 Aethionema arabicum HOM05D003412 ORTHO05D003962 1.1e-44 184.5 271 45.4
Sp3g04690 Schrenkiella parvula HOM05D003412 ORTHO05D003962 3.5e-43 179.5 270 44.4
A05p42230 Brassica napus HOM05D003412 ORTHO05D003962 1.1e-41 174.5 162 59.9
BcaC05g29778 Brassica carinata HOM05D003412 ORTHO05D003962 4.2e-41 172.6 158 58.9
BraA05t22941Z Brassica rapa HOM05D003412 ORTHO05D003962 5.5e-41 172.2 169 58.0
BcaC05g30086 Brassica carinata HOM05D003412 ORTHO05D003962 8.0e-40 168.3 273 43.6
BolC5t34803H Brassica oleracea HOM05D003412 ORTHO05D003962 3.4e-38 162.9 280 42.5
Mapoly0116s0017 Marchantia polymorpha HOM05D003412 ORTHO05D003962 1.6e-27 127.5 191 40.8
Zm00001eb075980 Zea mays HOM05D003412 ORTHO05D003962 8.6e-26 121.7 143 52.4
AT1G09483 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 2.8e-24 116.7 106 62.3
unitig_26.g8997 Utricularia gibba HOM05D003412 ORTHO05D003962 3.0e-23 113.2 186 43.5
Os01g0292700 Oryza sativa ssp. japonica HOM05D003412 ORTHO05D003962 1.2e-22 111.3 272 36.4
Zm00001eb129850 Zea mays HOM05D003412 ORTHO05D003962 9.2e-20 101.7 273 31.9
Zm00001eb113430 Zea mays HOM05D003412 ORTHO05D003962 2.9e-13 80.1 187 35.8
Zm00001eb080250 Zea mays HOM05D003412 ORTHO05D003962 3.5e-11 73.2 102 48.0
Zm00001eb052040 Zea mays HOM05D003412 ORTHO05D003962 5.6e-09 65.9 137 38.0
MBI06_g33528_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 4.0e-07 59.7 39 82.1


User provided reference genes

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