Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000040.1 Olea europaea HOM05D000888 ORTHO05D000740 2.8e-96 355.1 165 100.0
Oeu064572.1 Olea europaea HOM05D000888 ORTHO05D000740 2.9e-48 195.7 226 47.3
Oeu064573.3 Olea europaea HOM05D000888 ORTHO05D000740 2.6e-41 172.6 258 41.1
Oeu064570.1 Olea europaea HOM05D000888 ORTHO05D000740 1.7e-32 143.3 184 44.0
Migut.D01642 Erythranthe guttata HOM05D000888 ORTHO05D000740 2.6e-25 119.4 211 33.2
Hma1.2p1_0023F.1_g015290 Hydrangea macrophylla HOM05D000888 ORTHO05D000740 1.1e-23 114.0 246 29.7
Dinv36014 Davidia involucrata HOM05D000888 ORTHO05D000740 1.2e-22 110.5 245 29.4
Migut.D01639 Erythranthe guttata HOM05D000888 ORTHO05D000740 3.0e-21 105.9 217 30.0
Migut.D01640 Erythranthe guttata HOM05D000888 ORTHO05D000740 8.7e-21 104.4 167 36.5
Peaxi162Scf00073g01423 Petunia axillaris HOM05D000888 ORTHO05D000740 3.1e-18 95.9 229 25.8
CAN.G32.2 Capsicum annuum HOM05D000888 ORTHO05D000740 2.9e-16 89.4 228 25.0
Sopen04g026790 Solanum pennellii HOM05D000888 ORTHO05D000740 6.4e-16 88.2 228 25.4
PGSC0003DMG403024846 Solanum tuberosum HOM05D000888 ORTHO05D000740 6.4e-16 88.2 228 25.4
Solyc04g064830.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 8.4e-16 87.8 211 25.6
Prupe.1G517200 Prunus persica HOM05D000888 ORTHO05D000740 1.1e-15 87.4 215 27.9
Nitab4.5_0002849g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.4e-15 87.0 226 24.3
FAN01G3034 Fragaria x ananassa HOM05D000888 ORTHO05D000740 3.2e-15 85.9 217 26.3
MD00G1162200 Malus domestica HOM05D000888 ORTHO05D000740 4.2e-15 85.5 200 30.0
Nitab4.5_0003237g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.2e-15 85.5 227 24.7
PGR083G1938 Punica granatum HOM05D000823 ORTHO05D000088 4.2e-15 85.5 200 27.0
Manes.18G026450 Manihot esculenta HOM05D000888 ORTHO05D000740 9.3e-15 84.3 237 26.6
FAN10G0782 Fragaria x ananassa HOM05D000888 ORTHO05D000740 1.0e-13 80.9 219 25.6
FAN10G2447 Fragaria x ananassa HOM05D000888 ORTHO05D000740 1.0e-13 80.9 219 25.6
unitig_0.g13 Utricularia gibba HOM05D000888 ORTHO05D000740 1.3e-13 80.5 173 28.9
MD15G1130900 Malus domestica HOM05D000888 ORTHO05D000740 2.3e-13 79.7 201 27.9
CSS0012527 Camellia sinensis var. sinensis HOM05D015488 ORTHO05D000740 3.9e-13 79.0 81 48.1
SGA_v2.0_scaffold110G31276 Striga asiatica HOM05D000888 ORTHO05D000740 6.7e-13 78.2 238 24.4
PSO421G0312 Papaver somniferum HOM05D000823 ORTHO05D000088 4.3e-12 75.5 119 37.8
Nn1g09566 Nelumbo nucifera HOM05D000888 ORTHO05D000740 5.6e-12 75.1 237 24.9
FvH4_7g12210 Fragaria vesca HOM05D000888 ORTHO05D000740 1.3e-11 73.9 204 24.5
SalBow7G4543 Salvia bowleyana HOM05D000823 ORTHO05D000740 1.1e-10 70.9 84 41.7
BcaB06g27990 Brassica carinata HOM05D000888 ORTHO05D000740 1.3e-08 63.9 70 42.9
EL10Ac8g19102 Beta vulgaris HOM05D000823 ORTHO05D000088 1.7e-08 63.5 121 26.4
BolC4t26974H Brassica oleracea HOM05D000888 ORTHO05D000740 2.2e-08 63.2 88 36.4
BcaC02g08432 Brassica carinata HOM05D000888 ORTHO05D000740 3.8e-08 62.4 94 37.2
C04p54270 Brassica napus HOM05D000888 ORTHO05D000740 3.8e-08 62.4 94 37.2
PSO541G5436 Papaver somniferum HOM05D000823 ORTHO05D000088 4.9e-08 62.0 70 44.3
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 4.9e-08 62.0 216 22.2
SalBow7G1253 Salvia bowleyana HOM05D000888 ORTHO05D000740 4.9e-08 62.0 91 41.8
Nn8g38649 Nelumbo nucifera HOM05D000888 ORTHO05D000740 6.5e-08 61.6 103 32.0
Rhsim02G0167600 Rhododendron simsii HOM05D000395 ORTHO05D000088 6.5e-08 61.6 139 30.2
Nitab4.5_0010282g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 8.4e-08 61.2 127 28.3
PSO675G4238 Papaver somniferum HOM05D000823 ORTHO05D000088 1.1e-07 60.8 80 40.0
HPP92_014045 Vanilla planifolia HOM05D000823 ORTHO05D000088 1.1e-07 60.8 81 34.6
Aqoxy6G00277 Aquilegia oxysepala HOM05D000888 ORTHO05D000740 3.2e-07 59.3 70 40.0
A04p18990 Brassica napus HOM05D000888 ORTHO05D000740 3.2e-07 59.3 70 40.0
Potri.004G147200 Populus trichocarpa HOM05D000395 ORTHO05D000088 3.2e-07 59.3 80 37.5
PSO675G1309 Papaver somniferum HOM05D000395 ORTHO05D000088 4.2e-07 58.9 85 34.1
RcHm_v2.0_Chr7g0224941 Rosa chinensis HOM05D000823 ORTHO05D000088 5.5e-07 58.5 76 34.2
PSO724G1253 Papaver somniferum HOM05D000888 ORTHO05D000740 7.1e-07 58.2 84 36.9
Ciclev10026137m.g Citrus clementina HOM05D000823 ORTHO05D000088 9.3e-07 57.8 71 32.4
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 9.3e-07 57.8 86 32.6
Migut.B00294 Erythranthe guttata HOM05D000823 ORTHO05D000088 9.3e-07 57.8 175 23.4
BraA04t17499Z Brassica rapa HOM05D000888 ORTHO05D000740 1.2e-06 57.4 70 38.6
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.6e-06 57.0 89 34.8
Gohir.D03G019775 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.6e-06 57.0 123 30.1
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 2.7e-06 56.2 119 30.3
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 2.7e-06 56.2 119 30.3
Eucgr.I01211 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.7e-06 56.2 90 36.7
MBI11_g20093_MAGBIO Magnolia biondii HOM05D005797 ORTHO05D006479 2.7e-06 56.2 87 34.5
SalBow1G0528 Salvia bowleyana HOM05D015488 ORTHO05D023120 2.7e-06 56.2 87 33.3
MD04G1034600 Malus domestica HOM05D000823 ORTHO05D000088 3.5e-06 55.8 93 30.1
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 3.5e-06 55.8 140 27.9
CARHR280710 Cardamine hirsuta HOM05D000823 ORTHO05D000088 4.6e-06 55.5 78 33.3
Gorai.003G020800 Gossypium raimondii HOM05D000395 ORTHO05D000088 4.6e-06 55.5 123 30.9
HanXRQChr01g0030501 Helianthus annuus HOM05D000888 ORTHO05D000740 4.6e-06 55.5 92 35.9
Peaxi162Scf01340g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 4.6e-06 55.5 84 34.5
Carub.0004s0418 Capsella rubella HOM05D000888 ORTHO05D000740 6.0e-06 55.1 185 24.3
Lsat_1_v5_gn_4_9181 Lactuca sativa HOM05D009784 ORTHO05D010235 6.0e-06 55.1 72 31.9
Lj1g0016560 Lotus japonicus HOM05D000395 ORTHO05D000088 6.0e-06 55.1 90 38.9
RcHm_v2.0_Chr1g0318651 Rosa chinensis HOM05D000823 ORTHO05D000088 6.0e-06 55.1 72 34.7
A09p56180 Brassica napus HOM05D002682 ORTHO05D002878 7.9e-06 54.7 74 35.1
BraA09t41014Z Brassica rapa HOM05D002682 ORTHO05D002878 7.9e-06 54.7 74 35.1
Carub.0004s0405 Capsella rubella HOM05D000888 ORTHO05D000740 7.9e-06 54.7 79 34.2
AUR62024670 Chenopodium quinoa HOM05D000395 ORTHO05D000088 7.9e-06 54.7 150 28.7
Thhalv10028050m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 7.9e-06 54.7 71 36.6
Glyma.16G046700 Glycine max HOM05D000395 ORTHO05D000088 7.9e-06 54.7 94 37.2
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 7.9e-06 54.7 88 38.6
Nn5g29400 Nelumbo nucifera HOM05D000823 ORTHO05D000088 7.9e-06 54.7 74 39.2


User provided reference genes

Program Settings