Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 7.6e-62 240.4 123 100.0
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.3e-45 186.4 121 81.0
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 4.2e-44 181.4 112 81.2
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.7e-43 178.7 121 77.7
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 1.9e-41 172.6 112 80.4
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 5.6e-41 171.0 118 75.4
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.4e-41 170.6 108 81.5
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.4e-41 170.6 108 81.5
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 9.6e-41 170.2 109 81.7
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.6e-40 169.5 120 75.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.8e-40 168.7 109 79.8
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.8e-40 168.7 109 79.8
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 6.2e-40 167.5 110 81.8
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 8.1e-40 167.2 109 78.0
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 8.1e-40 167.2 109 78.0
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 8.1e-40 167.2 109 78.9
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.1e-39 166.8 107 81.3
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.1e-39 166.8 109 78.0
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.4e-39 166.4 109 80.7
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 2.4e-39 165.6 109 78.0
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 6.9e-39 164.1 109 78.0
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 9.0e-39 163.7 109 76.1
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 9.0e-39 163.7 109 78.0
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 9.0e-39 163.7 112 73.2
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.2e-38 163.3 108 78.7
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 1.2e-38 163.3 109 76.1
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.2e-38 163.3 109 76.1
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.2e-38 163.3 109 78.0
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.5e-38 162.9 109 76.1
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.5e-38 162.9 109 78.9
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.0e-38 162.5 109 75.2
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.6e-38 162.2 110 75.5
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 3.4e-38 161.8 109 74.3
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 3.4e-38 161.8 118 72.0
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 5.8e-38 161.0 109 77.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 7.6e-38 160.6 109 76.1
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 7.6e-38 160.6 109 75.2
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 7.6e-38 160.6 109 75.2
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 7.6e-38 160.6 109 75.2
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 9.9e-38 160.2 109 74.3
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 1.3e-37 159.8 109 74.3
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.3e-37 159.8 107 74.8
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.3e-37 159.8 109 75.2
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.7e-37 159.5 109 74.3
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.7e-37 159.5 109 75.2
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 1.7e-37 159.5 109 74.3
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.2e-37 159.1 107 73.8
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.2e-37 159.1 109 73.4
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.9e-37 158.7 108 73.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.9e-37 158.7 109 74.3
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.9e-37 158.7 106 78.3
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.9e-37 158.7 109 74.3
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 4.9e-37 157.9 109 73.4
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 4.9e-37 157.9 110 74.5
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 6.4e-37 157.5 109 73.4
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 6.4e-37 157.5 110 75.5
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 6.4e-37 157.5 110 72.7
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 6.4e-37 157.5 109 73.4
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 8.4e-37 157.1 109 74.3
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.1e-36 156.8 109 71.6
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.1e-36 156.8 109 72.5
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.1e-36 156.8 112 71.4
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 1.4e-36 156.4 109 70.6
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.4e-36 156.4 110 72.7
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.4e-36 156.4 109 70.6
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.4e-36 156.4 114 72.8
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.9e-36 156.0 108 75.9
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 2.4e-36 155.6 109 72.5
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 2.4e-36 155.6 109 73.4
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.4e-36 155.6 109 69.7
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 3.2e-36 155.2 97 82.5
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 3.2e-36 155.2 109 74.3
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 3.2e-36 155.2 107 74.8
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 4.2e-36 154.8 107 73.8
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 5.5e-36 154.5 107 72.9
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 5.5e-36 154.5 112 75.9
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 7.1e-36 154.1 109 72.5
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 7.1e-36 154.1 110 73.6
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 9.3e-36 153.7 107 72.9
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.2e-35 153.3 109 72.5
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 2.1e-35 152.5 106 76.4
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 3.5e-35 151.8 109 71.6
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 3.5e-35 151.8 106 74.5
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 3.0e-34 148.7 109 67.0
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 3.9e-34 148.3 108 71.3
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 6.7e-34 147.5 109 65.1
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 8.7e-34 147.1 107 72.0
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.1e-33 146.7 109 70.6
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.1e-33 146.7 109 70.6
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.1e-33 146.7 109 70.6
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.9e-33 146.0 110 70.0
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.6e-30 135.6 115 66.1
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.0e-29 133.7 119 63.0
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.2e-29 132.5 109 62.4
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.4e-28 129.8 110 59.1
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.9e-28 129.4 109 65.1
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 9.3e-28 127.1 109 62.4
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 3.5e-27 125.2 108 65.7
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 5.7e-25 117.9 109 59.6
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 2.2e-24 115.9 106 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.5e-17 92.4 110 50.0
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 9.7e-17 90.5 66 77.3
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 1.3e-16 90.1 58 75.9
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.3e-16 90.1 90 56.7
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.5e-14 83.2 110 49.1
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.4e-14 82.0 70 57.1
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.0e-13 80.5 46 73.9
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.0e-13 80.5 107 43.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.7e-13 79.7 64 68.8
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 2.5e-12 75.9 92 46.7
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.4e-10 70.1 38 92.1
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 5.1e-10 68.2 38 89.5
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 8.8e-10 67.4 43 74.4
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.0e-09 66.2 46 65.2
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 4.4e-09 65.1 37 70.3
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.1e-07 58.9 92 40.2
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 1.2e-06 57.0 38 73.7
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 7.7e-06 54.3 91 39.6


User provided reference genes

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