Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 1.4e-36 155.6 71 100.0
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 1.6e-19 99.0 63 68.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.6e-19 99.0 63 68.3
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 2.7e-19 98.2 78 60.3
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 2.7e-19 98.2 78 60.3
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.7e-19 98.2 78 60.3
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 3.0e-18 94.7 78 57.7
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.1e-17 92.8 67 64.2
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 1.9e-17 92.0 73 60.3
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.3e-17 91.3 83 54.2
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.3e-17 91.3 83 54.2
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.3e-17 91.3 83 54.2
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.3e-17 91.3 83 54.2
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 3.6e-16 87.8 63 65.1
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 8.1e-16 86.7 63 65.1
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 8.1e-16 86.7 63 65.1
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 8.1e-16 86.7 63 65.1
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 8.1e-16 86.7 63 65.1
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 8.1e-16 86.7 63 65.1
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 8.1e-16 86.7 63 65.1
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 1.8e-15 85.5 63 63.5
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 6.8e-15 83.6 63 63.5
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.9e-15 83.2 63 61.9
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.5e-14 82.4 63 63.5
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 2.0e-14 82.0 68 55.9
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.8e-14 80.5 81 49.4
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 9.9e-14 79.7 63 61.9
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.7e-13 79.0 63 61.9
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.4e-12 75.9 63 57.1
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 4.1e-12 74.3 63 60.3
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 7.1e-12 73.6 63 57.1
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 9.2e-12 73.2 63 58.7
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 7.8e-11 70.1 58 60.3
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 7.8e-11 70.1 60 56.7
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 1.3e-10 69.3 63 55.6
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 8.6e-10 66.6 77 45.5
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 1.5e-09 65.9 56 58.9
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.5e-09 65.9 71 47.9
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 5.6e-09 63.9 46 58.7
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.6e-08 62.4 66 47.0
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 2.8e-08 61.6 60 53.3
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 4.7e-08 60.8 63 46.0
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.1e-07 58.2 40 67.5
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.1e-07 58.2 40 67.5
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.1e-07 58.2 40 67.5
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.1e-07 58.2 40 67.5
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.1e-07 58.2 40 67.5
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 5.2e-07 57.4 41 56.1
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 5.2e-07 57.4 46 52.2
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 8.9e-07 56.6 40 67.5
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.5e-06 55.8 60 43.3
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.5e-06 55.8 40 65.0
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.0e-06 55.5 28 75.0
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 2.0e-06 55.5 28 75.0
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 2.0e-06 55.5 28 75.0
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 2.0e-06 55.5 48 52.1
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 2.0e-06 55.5 28 75.0
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 2.0e-06 55.5 28 75.0
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 2.0e-06 55.5 28 75.0
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 2.6e-06 55.1 40 65.0
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 4.4e-06 54.3 22 90.9
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 7.6e-06 53.5 28 71.4
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 9.9e-06 53.1 58 46.6
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 9.9e-06 53.1 28 71.4


User provided reference genes

Program Settings