Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g41301 Nelumbo nucifera HOM05D005274 ORTHO05D006485 5.6e-78 294.3 156 100.0
Nn8g40353 Nelumbo nucifera HOM05D005274 ORTHO05D006485 5.6e-46 188.0 98 100.0
TAR624G0372 Trochodendron aralioides HOM05D005274 ORTHO05D006485 2.5e-38 162.5 127 66.9
TAR381G1230 Trochodendron aralioides HOM05D005274 ORTHO05D006485 2.1e-32 142.9 126 64.3
Atru.chr6.2707 Acer truncatum HOM05D005274 ORTHO05D006485 5.9e-27 124.8 126 55.6
Dinv33272 Davidia involucrata HOM05D005274 ORTHO05D006485 1.3e-26 123.6 110 61.8
GSVIVG01032972001 Vitis vinifera HOM05D005274 ORTHO05D006485 1.3e-26 123.6 112 57.1
QL02p069234 Quercus lobata HOM05D005274 ORTHO05D006485 1.1e-25 120.6 120 54.2
Eucgr.I01592 Eucalyptus grandis HOM05D005274 ORTHO05D006485 2.5e-25 119.4 122 54.9
RcHm_v2.0_Chr6g0267991 Rosa chinensis HOM05D005274 ORTHO05D006485 4.2e-25 118.6 118 54.2
FAN15G2064 Fragaria x ananassa HOM05D005274 ORTHO05D006485 7.2e-25 117.9 126 51.6
Cpa.g.sc70.54 Carica papaya HOM05D005274 ORTHO05D006485 1.2e-24 117.1 110 56.4
Prupe.5G024800 Prunus persica HOM05D005274 ORTHO05D006485 1.2e-24 117.1 124 54.0
CSS0033174 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 3.6e-24 115.5 113 60.2
FvH4_2g10500 Fragaria vesca HOM05D005274 ORTHO05D006485 4.7e-24 115.2 118 53.4
CiPaw.04G000800 Carya illinoinensis HOM05D005274 ORTHO05D006485 6.1e-24 114.8 112 53.6
Peaxi162Scf00102g01534 Petunia axillaris HOM05D005274 ORTHO05D006485 7.9e-24 114.4 113 56.6
FAN27G1266 Fragaria x ananassa HOM05D005274 ORTHO05D006485 1.0e-23 114.0 118 52.5
FAN24G2993 Fragaria x ananassa HOM05D005274 ORTHO05D006485 1.4e-23 113.6 118 52.5
PGSC0003DMG400005779 Solanum tuberosum HOM05D005274 ORTHO05D006485 1.4e-23 113.6 108 56.5
ATR1136G175 Amborella trichopoda HOM05D005274 ORTHO05D006485 3.0e-23 112.5 125 52.0
Ciclev10016162m.g Citrus clementina HOM05D005274 ORTHO05D006485 8.8e-23 110.9 110 55.5
Cc00_g24660 Coffea canephora HOM05D005274 ORTHO05D006485 8.8e-23 110.9 131 51.9
TWI32G1102 Tripterygium wilfordii HOM05D005274 ORTHO05D006485 1.1e-22 110.5 113 55.8
SGA_v2.0_scaffold32G13165 Striga asiatica HOM05D005274 ORTHO05D006485 1.5e-22 110.2 113 54.9
vmacro18391 Vaccinium macrocarpon HOM05D005274 ORTHO05D006485 2.0e-22 109.8 113 55.8
Ca_26258_v3 Cicer arietinum L. HOM05D005274 ORTHO05D006485 2.6e-22 109.4 119 49.6
Oeu020806.2 Olea europaea HOM05D005274 ORTHO05D006485 4.4e-22 108.6 129 50.4
VMungo1309G1271 Vigna mungo HOM05D005274 ORTHO05D006485 4.4e-22 108.6 124 53.2
Medtr5g071380 Medicago truncatula HOM05D005274 ORTHO05D006485 9.7e-22 107.5 119 50.4
CAN.G792.79 Capsicum annuum HOM05D005274 ORTHO05D006485 1.3e-21 107.1 122 50.8
Glyma.14G044800 Glycine max HOM05D005274 ORTHO05D006485 1.3e-21 107.1 120 51.7
Duzib187G0989 Durio zibethinus HOM05D005274 ORTHO05D006485 1.7e-21 106.7 124 50.8
Glyma.02G271800 Glycine max HOM05D005274 ORTHO05D006485 1.7e-21 106.7 120 50.8
TPR.G27812 Trifolium pratense HOM05D005274 ORTHO05D006485 1.7e-21 106.7 124 46.8
Potri.004G197200 Populus trichocarpa HOM05D005274 ORTHO05D006485 2.2e-21 106.3 126 50.8
Medtr2g097630 Medicago truncatula HOM05D005274 ORTHO05D006485 2.8e-21 105.9 119 49.6
PSO063G1622 Papaver somniferum HOM05D005274 ORTHO05D006485 2.8e-21 105.9 124 51.6
MSTRG.20092 Avicennia marina HOM05D005274 ORTHO05D006485 4.8e-21 105.1 115 51.3
ECA238G2078 Erigeron canadensis HOM05D005274 ORTHO05D006485 6.3e-21 104.8 114 50.9
LjContig00564g0024425 Lotus japonicus HOM05D005274 ORTHO05D006485 6.3e-21 104.8 125 48.0
PSO017G0788 Papaver somniferum HOM05D005274 ORTHO05D006485 8.2e-21 104.4 124 52.4
Sopen10g034190 Solanum pennellii HOM05D005274 ORTHO05D006485 8.2e-21 104.4 112 50.0
PGSC0003DMG400011003 Solanum tuberosum HOM05D005274 ORTHO05D006485 8.2e-21 104.4 108 53.7
Lsat_1_v5_gn_2_86720 Lactuca sativa HOM05D005274 ORTHO05D006485 1.1e-20 104.0 123 47.2
arahy.Tifrunner.gnm1.ann1.5GP605 Arachis hypogaea HOM05D005274 ORTHO05D006485 1.8e-20 103.2 124 44.4
Hma1.2p1_0474F.1_g160740 Hydrangea macrophylla HOM05D005274 ORTHO05D006485 3.1e-20 102.4 110 56.4
Lalb_Chr10g0096401 Lupinus albus HOM05D005274 ORTHO05D006485 3.1e-20 102.4 114 50.9
MD09G1264600 Malus domestica HOM05D005274 ORTHO05D006485 3.1e-20 102.4 124 50.0
AUR62017870 Chenopodium quinoa HOM05D005274 ORTHO05D006485 7.0e-20 101.3 114 51.8
arahy.Tifrunner.gnm1.ann1.T7P6Q4 Arachis hypogaea HOM05D005274 ORTHO05D006485 9.1e-20 100.9 124 44.4
AUR62009346 Chenopodium quinoa HOM05D005274 ORTHO05D006485 1.2e-19 100.5 115 53.0
EL10Ac6g13414 Beta vulgaris HOM05D005274 ORTHO05D006485 1.5e-19 100.1 112 48.2
Cc06_g13990 Coffea canephora HOM05D005274 ORTHO05D006485 2.0e-19 99.8 110 52.7
HanXRQChr07g0200241 Helianthus annuus HOM05D005274 ORTHO05D006485 2.0e-19 99.8 129 45.7
MELO3C005096.2 Cucumis melo HOM05D005274 ORTHO05D006485 3.5e-19 99.0 115 48.7
CsaV3_5G024970 Cucumis sativus L. HOM05D005274 ORTHO05D006485 3.5e-19 99.0 115 47.0
DCAR_022112 Daucus carota HOM05D005274 ORTHO05D006485 4.5e-19 98.6 109 51.4
Aqoxy5G02491 Aquilegia oxysepala HOM05D005274 ORTHO05D006485 7.7e-19 97.8 121 46.3
Cfa007146 Carpinus fangiana HOM05D005274 ORTHO05D006485 1.3e-18 97.1 102 54.9
Gohir.D11G068400 Gossypium hirsutum HOM05D005274 ORTHO05D006485 1.3e-18 97.1 113 53.1
Gorai.007G073200 Gossypium raimondii HOM05D005274 ORTHO05D006485 1.7e-18 96.7 113 53.1
Nitab4.5_0004836g0020 Nicotiana tabacum HOM05D005274 ORTHO05D006485 1.7e-18 96.7 101 54.5
CSS0005176 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 2.9e-18 95.9 104 56.7
Psat2g056880 Pisum sativum HOM05D005274 ORTHO05D006485 2.9e-18 95.9 112 44.6
Migut.B00249 Erythranthe guttata HOM05D005274 ORTHO05D006485 3.8e-18 95.5 127 44.1
Phvul.005G158400 Phaseolus vulgaris HOM05D005274 ORTHO05D006485 3.8e-18 95.5 117 50.4
Rhsim08G0038500 Rhododendron simsii HOM05D005274 ORTHO05D006485 5.0e-18 95.1 101 56.4
Nitab4.5_0006090g0030 Nicotiana tabacum HOM05D005274 ORTHO05D006485 8.5e-18 94.4 99 53.5
PGR142G3427 Punica granatum HOM05D005274 ORTHO05D006485 1.4e-17 93.6 113 49.6
THA.LOC104802536 Tarenaya hassleriana HOM05D005274 ORTHO05D006485 1.4e-17 93.6 115 50.4
Solyc08g008040.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 1.9e-17 93.2 100 51.0
Sabra04G0133600 Salix brachista HOM05D005274 ORTHO05D006485 3.2e-17 92.4 105 52.4
Sed0000255 Sechium edule HOM05D005274 ORTHO05D006485 1.2e-16 90.5 113 43.4
Lj9A368G50 Lonicera japonica HOM05D005274 ORTHO05D006485 2.1e-16 89.7 102 52.0
SalBow6G5022 Salvia bowleyana HOM05D005274 ORTHO05D006485 2.7e-16 89.4 113 49.6
Oeu034171.3 Olea europaea HOM05D005274 ORTHO05D006485 6.1e-16 88.2 108 50.0
SalBow6G6215 Salvia bowleyana HOM05D005274 ORTHO05D006485 6.1e-16 88.2 113 48.7
Sopen08g003920 Solanum pennellii HOM05D005274 ORTHO05D006485 1.4e-15 87.0 98 48.0
AUR62037816 Chenopodium quinoa HOM05D005274 ORTHO05D006485 5.2e-15 85.1 105 49.5
Sc14g0002660 Simmondsia chinensis HOM05D005274 ORTHO05D006485 5.2e-15 85.1 103 49.5
Manes.11G112500 Manihot esculenta HOM05D005274 ORTHO05D006485 1.1e-14 84.0 98 48.0
Thecc.04G049000 Theobroma cacao HOM05D005274 ORTHO05D006485 3.3e-14 82.4 101 50.5
Ah.10g032810 Amaranthus hybridus HOM05D005274 ORTHO05D006485 7.4e-14 81.3 114 45.6
ClCG01G008500 Citrullus lanatus HOM05D005274 ORTHO05D006485 1.3e-13 80.5 115 42.6
unitig_744.g24245 Utricularia gibba HOM05D005274 ORTHO05D006485 1.3e-13 80.5 119 43.7
MD08G1181300 Malus domestica HOM05D005274 ORTHO05D006485 2.2e-13 79.7 101 46.5
A03p19190 Brassica napus HOM05D005274 ORTHO05D006485 1.4e-12 77.0 114 43.0
BraA03t11174Z Brassica rapa HOM05D005274 ORTHO05D006485 1.4e-12 77.0 114 43.0
Carub.0004s1624 Capsella rubella HOM05D005274 ORTHO05D006485 1.8e-12 76.6 110 40.9
CARHR128660 Cardamine hirsuta HOM05D005274 ORTHO05D006485 1.8e-12 76.6 110 44.5
Gohir.A11G064100 Gossypium hirsutum HOM05D005274 ORTHO05D006485 1.8e-12 76.6 98 49.0
COL.COLO4_13388 Corchorus olitorius HOM05D005274 ORTHO05D006485 4.1e-12 75.5 101 46.5
Nitab4.5_0000568g0280 Nicotiana tabacum HOM05D005274 ORTHO05D006485 5.3e-12 75.1 105 45.7
Sp4g16830 Schrenkiella parvula HOM05D005274 ORTHO05D006485 7.0e-12 74.7 112 42.9
Thhalv10017887m.g Eutrema salsugineum HOM05D005274 ORTHO05D006485 1.6e-11 73.6 110 42.7
BcaB01g06368 Brassica carinata HOM05D005274 ORTHO05D006485 2.0e-11 73.2 116 44.0
BcaC01g05789 Brassica carinata HOM05D005274 ORTHO05D006485 2.6e-11 72.8 114 41.2
C03p22390 Brassica napus HOM05D005274 ORTHO05D006485 2.6e-11 72.8 114 40.4
BolC3t14622H Brassica oleracea HOM05D005274 ORTHO05D006485 2.6e-11 72.8 114 41.2
CANSAT54G1155 Cannabis sativa HOM05D005274 ORTHO05D006485 2.6e-11 72.8 116 39.7
Aa31LG10G6820 Aethionema arabicum HOM05D005274 ORTHO05D006485 4.5e-11 72.0 109 41.3
AL4G30540 Arabidopsis lyrata HOM05D005274 ORTHO05D006485 7.7e-11 71.2 110 40.9
Hund29750 Selenicereus undatus HOM05D005274 ORTHO05D006485 7.7e-11 71.2 85 48.2
Hund29752 Selenicereus undatus HOM05D005274 ORTHO05D006485 7.7e-11 71.2 85 48.2
AT2G34570 Arabidopsis thaliana HOM05D005274 ORTHO05D006485 2.9e-10 69.3 114 40.4
SEGI_09940 Sequoiadendron giganteum HOM05D005274 ORTHO05D006485 5.0e-10 68.6 104 40.4
AagrBONN_evm.TU.Sc2ySwM_228.2974 Anthoceros agrestis HOM05D005274 ORTHO05D006485 7.2e-09 64.7 112 37.5
Os02g0468200 Oryza sativa ssp. japonica HOM05D005274 ORTHO05D006485 1.6e-08 63.5 101 39.6
Zm00001eb319780 Zea mays HOM05D005274 ORTHO05D006485 1.6e-08 63.5 103 41.7
Hma1.2p1_0474F.1_g160730 Hydrangea macrophylla HOM05D005274 ORTHO05D006485 8.0e-08 61.2 85 50.6
Mapoly0006s0036 Marchantia polymorpha HOM05D005274 ORTHO05D006485 1.4e-07 60.5 122 36.9
SHI31386 Sapria himalayana HOM05D005274 ORTHO05D006485 1.4e-07 60.5 45 64.4
Solyc10g084740.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 1.8e-07 60.1 112 41.1
MD16G1246600 Malus domestica HOM05D005274 ORTHO05D006485 2.3e-07 59.7 55 56.4
SMO347G0017 Selaginella moellendorffii HOM05D005274 ORTHO05D006485 6.7e-07 58.2 113 34.5
Potri.009G159400 Populus trichocarpa HOM05D005274 ORTHO05D006485 1.2e-06 57.4 41 68.3
SHI33526 Sapria himalayana HOM05D005274 ORTHO05D006485 1.5e-06 57.0 104 38.5
Pp3c2_27880 Physcomitrium patens HOM05D005274 ORTHO05D006485 2.0e-06 56.6 116 38.8


User provided reference genes

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