Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g41203 Nelumbo nucifera HOM05D004672 ORTHO05D005732 4.8e-42 174.1 88 100.0
Nn1g07286 Nelumbo nucifera HOM05D004672 ORTHO05D005732 6.9e-25 117.1 71 83.1
MBI16_g10454_MAGBIO Magnolia biondii HOM05D004672 ORTHO05D005732 1.3e-20 102.8 71 70.4
AUR62030919 Chenopodium quinoa HOM05D004672 ORTHO05D005732 1.9e-19 99.0 71 60.6
Ciclev10027696m.g Citrus clementina HOM05D004672 ORTHO05D005732 1.9e-19 99.0 71 66.2
GSVIVG01038520001 Vitis vinifera HOM05D004672 ORTHO05D005732 7.4e-19 97.1 71 63.4
AUR62027080 Chenopodium quinoa HOM05D004672 ORTHO05D005732 9.7e-19 96.7 71 59.2
Hma1.2p1_0908F.1_g235670 Hydrangea macrophylla HOM05D004672 ORTHO05D005732 2.2e-18 95.5 71 63.4
Hund06479 Selenicereus undatus HOM05D004672 ORTHO05D005732 2.8e-18 95.1 71 62.0
CSS0000676 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 3.7e-18 94.7 71 62.0
TPR.G32637 Trifolium pratense HOM05D004672 ORTHO05D005732 1.1e-17 93.2 71 60.6
Cpa.g.sc20.40 Carica papaya HOM05D004672 ORTHO05D005732 1.4e-17 92.8 71 60.6
Dinv08968 Davidia involucrata HOM05D004672 ORTHO05D005732 1.4e-17 92.8 71 59.2
Duzib132G0551 Durio zibethinus HOM05D004672 ORTHO05D005732 1.4e-17 92.8 71 60.6
TAR628G0793 Trochodendron aralioides HOM05D004672 ORTHO05D005732 1.4e-17 92.8 71 60.6
Cc02_g20590 Coffea canephora HOM05D004672 ORTHO05D005732 1.8e-17 92.4 71 66.2
Oeu042393.4 Olea europaea HOM05D004672 ORTHO05D005732 1.8e-17 92.4 71 57.7
Atru.chr6.1353 Acer truncatum HOM05D004672 ORTHO05D005732 2.4e-17 92.0 68 63.2
Nitab4.5_0002335g0010 Nicotiana tabacum HOM05D004672 ORTHO05D005732 2.4e-17 92.0 71 56.3
Gohir.D13G048000 Gossypium hirsutum HOM05D004672 ORTHO05D005732 3.1e-17 91.7 71 57.7
Aqoxy6G00637 Aquilegia oxysepala HOM05D004672 ORTHO05D005732 4.1e-17 91.3 71 60.6
EL10Ac9g22127 Beta vulgaris HOM05D004672 ORTHO05D005732 4.1e-17 91.3 71 59.2
Prupe.8G075100 Prunus persica HOM05D004672 ORTHO05D005732 4.1e-17 91.3 77 55.8
PSO017G1610 Papaver somniferum HOM05D004672 ORTHO05D005732 5.3e-17 90.9 71 57.7
Oeu033795.2 Olea europaea HOM05D004672 ORTHO05D005732 6.9e-17 90.5 71 57.7
Potri.001G285600 Populus trichocarpa HOM05D004672 ORTHO05D005732 6.9e-17 90.5 71 59.2
MSTRG.16633 Avicennia marina HOM05D004672 ORTHO05D005732 9.0e-17 90.1 68 58.8
Gohir.A13G049500 Gossypium hirsutum HOM05D004672 ORTHO05D005732 9.0e-17 90.1 71 56.3
Gorai.013G053600 Gossypium raimondii HOM05D004672 ORTHO05D005732 9.0e-17 90.1 71 56.3
Nitab4.5_0005163g0020 Nicotiana tabacum HOM05D004672 ORTHO05D005732 9.0e-17 90.1 71 54.9
THA.LOC104818461 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 9.0e-17 90.1 71 57.7
VMungo0540G1852 Vigna mungo HOM05D004672 ORTHO05D005732 9.0e-17 90.1 71 59.2
TWI59G0488 Tripterygium wilfordii HOM05D004672 ORTHO05D005732 1.2e-16 89.7 71 59.2
arahy.Tifrunner.gnm1.ann1.BVLY6P Arachis hypogaea HOM05D004672 ORTHO05D005732 1.5e-16 89.4 71 57.7
QL11p026607 Quercus lobata HOM05D004672 ORTHO05D005732 1.5e-16 89.4 71 57.7
Solyc01g106220.4 Solanum lycopersicum HOM05D004672 ORTHO05D005732 1.5e-16 89.4 71 54.9
Actinidia02411 Actinidia chinensis HOM05D004672 ORTHO05D005732 2.0e-16 89.0 71 57.7
Glyma.15G060100 Glycine max HOM05D004672 ORTHO05D005732 2.0e-16 89.0 71 59.2
Phvul.006G199700 Phaseolus vulgaris HOM05D004672 ORTHO05D005732 2.0e-16 89.0 71 59.2
Sopen01g048630 Solanum pennellii HOM05D004672 ORTHO05D005732 2.6e-16 88.6 71 54.9
Ah.01g024170 Amaranthus hybridus HOM05D004672 ORTHO05D005732 3.4e-16 88.2 71 57.7
PGSC0003DMG400010676 Solanum tuberosum HOM05D004672 ORTHO05D005732 3.4e-16 88.2 71 53.5
arahy.Tifrunner.gnm1.ann1.GE1IDC Arachis hypogaea HOM05D004672 ORTHO05D005732 4.5e-16 87.8 71 56.3
Eucgr.I02582 Eucalyptus grandis HOM05D004672 ORTHO05D005732 4.5e-16 87.8 71 57.7
Potri.009G079900 Populus trichocarpa HOM05D004672 ORTHO05D005732 4.5e-16 87.8 71 57.7
Sabra16G0178000 Salix brachista HOM05D004672 ORTHO05D005732 4.5e-16 87.8 71 54.9
Glyma.13G254600 Glycine max HOM05D004672 ORTHO05D005732 5.9e-16 87.4 71 59.2
MD05G1049800 Malus domestica HOM05D004672 ORTHO05D005732 7.7e-16 87.0 77 51.9
MD10G1056900 Malus domestica HOM05D004672 ORTHO05D005732 7.7e-16 87.0 77 51.9
unitig_744.g24197 Utricularia gibba HOM05D004672 ORTHO05D005732 7.7e-16 87.0 71 52.1
Medtr2g010110 Medicago truncatula HOM05D004672 ORTHO05D005732 1.0e-15 86.7 71 57.7
Psat1g212840 Pisum sativum HOM05D004672 ORTHO05D005732 1.0e-15 86.7 71 56.3
HPP92_024099 Vanilla planifolia HOM05D004672 ORTHO05D005732 1.0e-15 86.7 81 54.3
CiPaw.06G160900 Carya illinoinensis HOM05D004672 ORTHO05D005732 1.3e-15 86.3 71 53.5
Peaxi162Scf00016g03462 Petunia axillaris HOM05D004672 ORTHO05D005732 1.3e-15 86.3 68 54.4
THA.LOC104799703 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 1.3e-15 86.3 67 59.7
SGA_v2.0_scaffold83G26394 Striga asiatica HOM05D004672 ORTHO05D005732 1.7e-15 85.9 68 57.4
AT5G64420 Arabidopsis thaliana HOM05D004672 ORTHO05D005732 2.2e-15 85.5 71 53.5
MELO3C018559.2 Cucumis melo HOM05D004672 ORTHO05D005732 2.2e-15 85.5 71 60.6
PSO478G3191 Papaver somniferum HOM05D004672 ORTHO05D005732 2.2e-15 85.5 71 54.9
Peaxi162Scf00016g03257 Petunia axillaris HOM05D004672 ORTHO05D005732 2.2e-15 85.5 68 52.9
A06p31080 Brassica napus HOM05D004672 ORTHO05D005732 2.9e-15 85.1 71 54.9
CSS0013617 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 2.9e-15 85.1 71 56.3
CAN.G504.43 Capsicum annuum HOM05D004672 ORTHO05D005732 2.9e-15 85.1 71 53.5
FvH4_2g11160 Fragaria vesca HOM05D004672 ORTHO05D005732 2.9e-15 85.1 71 57.7
FAN27G2619 Fragaria x ananassa HOM05D004672 ORTHO05D005732 2.9e-15 85.1 71 57.7
C03p61860 Brassica napus HOM05D004672 ORTHO05D005732 3.8e-15 84.7 71 54.9
BolC3t18446H Brassica oleracea HOM05D004672 ORTHO05D005732 3.8e-15 84.7 71 54.9
BraA06t26051Z Brassica rapa HOM05D004672 ORTHO05D005732 3.8e-15 84.7 71 54.9
FAN20G2876 Fragaria x ananassa HOM05D004672 ORTHO05D005732 3.8e-15 84.7 71 57.7
Carub.0008s2522 Capsella rubella HOM05D004672 ORTHO05D005732 5.0e-15 84.3 71 53.5
Ca_00181_v3 Cicer arietinum L. HOM05D004672 ORTHO05D005732 5.0e-15 84.3 81 51.9
Lalb_Chr18g0060301 Lupinus albus HOM05D004672 ORTHO05D005732 5.0e-15 84.3 71 57.7
AL8G41790 Arabidopsis lyrata HOM05D004672 ORTHO05D005732 6.5e-15 84.0 71 53.5
RcHm_v2.0_Chr6g0269481 Rosa chinensis HOM05D004672 ORTHO05D005732 8.5e-15 83.6 71 54.9
Sed0001753 Sechium edule HOM05D004672 ORTHO05D005732 8.5e-15 83.6 71 60.6
CANSAT54G0310 Cannabis sativa HOM05D004672 ORTHO05D005732 1.1e-14 83.2 71 57.7
CARHR278390 Cardamine hirsuta HOM05D004672 ORTHO05D005732 1.1e-14 83.2 71 53.5
CsaV3_7G007430 Cucumis sativus L. HOM05D004672 ORTHO05D005732 1.1e-14 83.2 71 59.2
ECA240G2418 Erigeron canadensis HOM05D004672 ORTHO05D005732 1.1e-14 83.2 71 52.1
FAN24G1132 Fragaria x ananassa HOM05D004672 ORTHO05D005732 1.1e-14 83.2 71 57.7
SalBow6G5524 Salvia bowleyana HOM05D004672 ORTHO05D005732 1.1e-14 83.2 68 55.9
Thecc.02G125000 Theobroma cacao HOM05D004672 ORTHO05D005732 1.1e-14 83.2 68 60.3
C02p63340 Brassica napus HOM05D004672 ORTHO05D005732 1.4e-14 82.8 76 50.0
BolC2t12404H Brassica oleracea HOM05D004672 ORTHO05D005732 1.4e-14 82.8 76 50.0
Thhalv10003522m.g Eutrema salsugineum HOM05D004672 ORTHO05D005732 1.4e-14 82.8 71 53.5
Sp2g27510 Schrenkiella parvula HOM05D004672 ORTHO05D005732 1.4e-14 82.8 71 53.5
ATR0800G038 Amborella trichopoda HOM05D004672 ORTHO05D005732 1.9e-14 82.4 71 54.9
ClCG09G016480 Citrullus lanatus HOM05D004672 ORTHO05D005732 1.9e-14 82.4 71 59.2
Sc06g0005830 Simmondsia chinensis HOM05D004672 ORTHO05D005732 1.9e-14 82.4 71 54.9
FAN15G2368 Fragaria x ananassa HOM05D004672 ORTHO05D005732 2.5e-14 82.0 71 56.3
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 3.2e-14 81.6 71 53.5
Haze_10395 Corylus avellana HOM05D004672 ORTHO05D005732 3.2e-14 81.6 71 53.5
Sed0014665 Sechium edule HOM05D004672 ORTHO05D005732 3.2e-14 81.6 71 56.3
Lj9C342T12 Lonicera japonica HOM05D004672 ORTHO05D005732 4.2e-14 81.3 71 54.9
Aa31LG1G17480 Aethionema arabicum HOM05D004672 ORTHO05D005732 5.5e-14 80.9 71 50.7
DCAR_021895 Daucus carota HOM05D004672 ORTHO05D005732 1.2e-13 79.7 71 50.7
Lj6g0005540 Lotus japonicus HOM05D004672 ORTHO05D005732 1.2e-13 79.7 71 54.9
PGR142G1680 Punica granatum HOM05D004672 ORTHO05D005732 2.1e-13 79.0 71 52.1
Migut.B00522 Erythranthe guttata HOM05D004672 ORTHO05D005732 2.7e-13 78.6 71 50.7
BcaC03g18261 Brassica carinata HOM05D004672 ORTHO05D005732 7.9e-13 77.0 67 50.7
Duzib132G1253 Durio zibethinus HOM05D004672 ORTHO05D005732 1.0e-12 76.6 68 55.9
Os02g0135700 Oryza sativa ssp. japonica HOM05D004672 ORTHO05D005732 1.8e-12 75.9 67 52.2
Manes.10G094200 Manihot esculenta HOM05D004672 ORTHO05D005732 3.0e-12 75.1 76 52.6
Zm00001eb231630 Zea mays HOM05D004672 ORTHO05D005732 3.0e-12 75.1 71 47.9
Lsat_1_v5_gn_9_113661 Lactuca sativa HOM05D004672 ORTHO05D005732 3.9e-12 74.7 71 53.5
Lsat_1_v5_gn_9_113760 Lactuca sativa HOM05D004672 ORTHO05D005732 3.9e-12 74.7 71 53.5
HanXRQChr03g0071051 Helianthus annuus HOM05D004672 ORTHO05D005732 8.8e-12 73.6 71 56.3
SHI04921 Sapria himalayana HOM05D004672 ORTHO05D005732 1.1e-11 73.2 71 47.9
vmacro06228 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 2.5e-11 72.0 76 47.4
Sabra09G0061900 Salix brachista HOM05D004672 ORTHO05D005732 5.7e-11 70.9 67 55.2
vmacro19391 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 5.7e-11 70.9 76 47.4
Zm00001eb156660 Zea mays HOM05D004672 ORTHO05D005732 9.7e-11 70.1 66 47.0
Gorai.005G227500 Gossypium raimondii HOM05D004672 ORTHO05D005732 2.8e-10 68.6 55 54.5
CDE05G2025 Ceratophyllum demersum HOM05D004672 ORTHO05D005732 3.7e-10 68.2 69 53.6
Gohir.D02G202550 Gossypium hirsutum HOM05D004672 ORTHO05D005732 1.4e-09 66.2 55 52.7
SEGI_31749 Sequoiadendron giganteum HOM05D004672 ORTHO05D005732 1.2e-08 63.2 73 45.2
Pp3c3_9940 Physcomitrium patens HOM05D004672 ORTHO05D005732 2.6e-08 62.0 71 42.3
Nitab4.5_0001405g0020 Nicotiana tabacum HOM05D004672 ORTHO05D005732 4.5e-08 61.2 65 40.0
Nitab4.5_0005163g0030 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.3e-07 59.7 53 47.2
SMO358G0564 Selaginella moellendorffii HOM05D004672 ORTHO05D005732 6.5e-07 57.4 76 38.2
Pp3c13_11570 Physcomitrium patens HOM05D004672 ORTHO05D005732 8.5e-07 57.0 71 40.8
Mapoly0136s0021 Marchantia polymorpha HOM05D004672 ORTHO05D005732 1.4e-06 56.2 71 43.7
AagrBONN_evm.TU.Sc2ySwM_228.3115__3116 Anthoceros agrestis HOM05D004672 ORTHO05D005732 4.2e-06 54.7 69 44.9


User provided reference genes

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